RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 IQGAP1P46940 1657 aa9.99□□□□□ -0.81
FARP1-241ENST00000602272 MED14O60244 1454 aa9.99□□□□□ -0.81
FARP1-241ENST00000602272 GIGYF1O75420 1035 aaPredicted RBP9.99□□□□□ -0.81
FARP1-241ENST00000602272 RNFT1Q5M7Z0 435 aa9.99□□□□□ -0.81
FARP1-241ENST00000602272 SVOPQ8N4V2 548 aa9.99□□□□□ -0.81
FARP1-241ENST00000602272 CCDC144AA2RUR9 1427 aa9.99□□□□□ -0.81
FARP1-241ENST00000602272 ZFYVE9O95405 1425 aa9.99□□□□□ -0.81
FARP1-241ENST00000602272 SCAF11Q99590 1463 aaKnown RBP9.98□□□□□ -0.81
FARP1-241ENST00000602272 UCN2Q96RP3 112 aa9.98□□□□□ -0.81
FARP1-241ENST00000602272 IFT172Q9UG01 1749 aa9.97□□□□□ -0.81
FARP1-241ENST00000602272 ZNF385CQ66K41 422 aaPredicted RBP9.97□□□□□ -0.81
FARP1-241ENST00000602272 CC2D2BQ6DHV5 1058 aa9.97□□□□□ -0.81
FARP1-241ENST00000602272 ANKLE2Q86XL3 938 aa9.97□□□□□ -0.81
FARP1-241ENST00000602272 NPHP4O75161 1426 aaPredicted RBP9.97□□□□□ -0.81
FARP1-241ENST00000602272 RIMS2Q9UQ26 1411 aa9.97□□□□□ -0.81
FARP1-241ENST00000602272 NEXMIFQ5QGS0 1516 aa9.97□□□□□ -0.81
FARP1-241ENST00000602272 PIK3CDO00329 1044 aa9.96□□□□□ -0.82
FARP1-241ENST00000602272 ERVK-9P63128 1117 aa9.96□□□□□ -0.82
FARP1-241ENST00000602272 FOXR1Q6PIV2 292 aa9.96□□□□□ -0.82
FARP1-241ENST00000602272 PRICKLE2Q7Z3G6 844 aa9.96□□□□□ -0.82
FARP1-241ENST00000602272 PHTF2Q8N3S3 785 aa9.96□□□□□ -0.82
FARP1-241ENST00000602272 TMEM151AQ8N4L1 468 aa9.96□□□□□ -0.82
FARP1-241ENST00000602272 ANKRD30BQ9BXX2 1392 aa9.96□□□□□ -0.82
FARP1-241ENST00000602272 PPLO60437 1756 aa9.96□□□□□ -0.82
FARP1-241ENST00000602272 LTKP29376 864 aa9.95□□□□□ -0.82
FARP1-241ENST00000602272 SRSF11Q05519 484 aaKnown RBP9.95□□□□□ -0.82
FARP1-241ENST00000602272 CCDC82Q8N4S0 544 aa9.95□□□□□ -0.82
FARP1-241ENST00000602272 NLRP3Q96P20 1036 aa9.95□□□□□ -0.82
FARP1-241ENST00000602272 PCGF6Q9BYE7 350 aa9.95□□□□□ -0.82
FARP1-241ENST00000602272 SPATA31E1Q6ZUB1 1445 aa9.95□□□□□ -0.82
FARP1-241ENST00000602272 DHX57Q6P158 1386 aaKnown RBP9.94□□□□□ -0.82
FARP1-241ENST00000602272 MEN1O00255 615 aa9.94□□□□□ -0.82
FARP1-241ENST00000602272 CYP2U1Q7Z449 544 aa9.94□□□□□ -0.82
FARP1-241ENST00000602272 TXNDC2Q86VQ3 553 aa9.94□□□□□ -0.82
FARP1-241ENST00000602272 EID1Q9Y6B2 187 aa9.94□□□□□ -0.82
FARP1-241ENST00000602272 A0A1W2PRU2 124 aa9.93□□□□□ -0.82
FARP1-241ENST00000602272 H7C1W4 665 aa9.93□□□□□ -0.82
FARP1-241ENST00000602272 GDF11O95390 407 aa9.93□□□□□ -0.82
FARP1-241ENST00000602272 RASSF7Q02833 373 aa9.93□□□□□ -0.82
FARP1-241ENST00000602272 TRIM22Q8IYM9 498 aa9.93□□□□□ -0.82
FARP1-241ENST00000602272 NRXN3Q9Y4C0 1643 aa9.93□□□□□ -0.82
FARP1-241ENST00000602272 PLEKHG1Q9ULL1 1385 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 ADAMTS2O95450 1211 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 GSK3AP49840 483 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 MARSP56192 900 aaKnown RBP9.92□□□□□ -0.82
FARP1-241ENST00000602272 MAP3K10Q02779 954 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 SLFNL1Q499Z3 407 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 ZNF326Q5BKZ1 582 aaKnown RBP9.92□□□□□ -0.82
FARP1-241ENST00000602272 WDR44Q5JSH3 913 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 SLC27A3Q5K4L6 730 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 TBC1D9Q6ZT07 1266 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 RNF135Q8IUD6 432 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.92□□□□□ -0.82
FARP1-241ENST00000602272 SERPINA10Q9UK55 444 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 DYRK1BQ9Y463 629 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 DIP2AQ14689 1571 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 SETBP1Q9Y6X0 1596 aa9.92□□□□□ -0.82
FARP1-241ENST00000602272 ARHGEF15O94989 841 aa9.91□□□□□ -0.82
FARP1-241ENST00000602272 CLN3Q13286 438 aa9.91□□□□□ -0.82
FARP1-241ENST00000602272 NFATC2IPQ8NCF5 419 aa9.91□□□□□ -0.82
FARP1-241ENST00000602272 CCDC97Q96F63 343 aaPredicted RBP9.91□□□□□ -0.82
FARP1-241ENST00000602272 SCARF2Q96GP6 870 aaPredicted RBP9.91□□□□□ -0.82
FARP1-241ENST00000602272 PPP1R12CQ9BZL4 782 aa9.91□□□□□ -0.82
FARP1-241ENST00000602272 ENAMQ9NRM1 1142 aa9.91□□□□□ -0.82
FARP1-241ENST00000602272 LTBP4Q8N2S1 1624 aa9.9□□□□□ -0.82
FARP1-241ENST00000602272 RPGRIP1LQ68CZ1 1315 aa9.9□□□□□ -0.82
FARP1-241ENST00000602272 PALM3A6NDB9 673 aaPredicted RBP9.9□□□□□ -0.82
FARP1-241ENST00000602272 PPP1R15AO75807 674 aaPredicted RBP9.9□□□□□ -0.82
FARP1-241ENST00000602272 RHOQP17081 205 aa9.9□□□□□ -0.82
FARP1-241ENST00000602272 TSGA10IPQ3SY00 556 aa9.9□□□□□ -0.82
FARP1-241ENST00000602272 CCDC85AQ96PX6 553 aaPredicted RBP9.9□□□□□ -0.82
FARP1-241ENST00000602272 TFIP11Q9UBB9 837 aaKnown RBP9.9□□□□□ -0.82
FARP1-241ENST00000602272 STRCP1A6NGW2 1772 aa9.89□□□□□ -0.83
FARP1-241ENST00000602272 KANK3Q6NY19 840 aa9.89□□□□□ -0.83
FARP1-241ENST00000602272 KCTD17Q8N5Z5 321 aa9.89□□□□□ -0.83
FARP1-241ENST00000602272 WHAMMQ8TF30 809 aa9.89□□□□□ -0.83
FARP1-241ENST00000602272 MBIPQ9NS73 344 aa9.89□□□□□ -0.83
FARP1-241ENST00000602272 CUEDC1Q9NWM3 386 aaPredicted RBP9.89□□□□□ -0.83
FARP1-241ENST00000602272 PCDHB11Q9Y5F2 797 aa9.89□□□□□ -0.83
FARP1-241ENST00000602272 SETD1AO15047 1707 aaKnown RBP9.89□□□□□ -0.83
FARP1-241ENST00000602272 MYOM2P54296 1465 aa9.89□□□□□ -0.83
FARP1-241ENST00000602272 ADAMTS13Q76LX8 1427 aa9.89□□□□□ -0.83
FARP1-241ENST00000602272 NWD1Q149M9 1564 aa9.88□□□□□ -0.83
FARP1-241ENST00000602272 ATP9BO43861 1147 aa9.88□□□□□ -0.83
FARP1-241ENST00000602272 SKIP12755 728 aa9.88□□□□□ -0.83
FARP1-241ENST00000602272 RGL3Q3MIN7 710 aa9.88□□□□□ -0.83
FARP1-241ENST00000602272 CFAP70Q5T0N1 1121 aa9.88□□□□□ -0.83
FARP1-241ENST00000602272 RIPOR1Q6ZS17 1223 aa9.88□□□□□ -0.83
FARP1-241ENST00000602272 PLPP7Q8NBV4 271 aa9.88□□□□□ -0.83
FARP1-241ENST00000602272 ZNF837Q96EG3 531 aaPredicted RBP9.88□□□□□ -0.83
FARP1-241ENST00000602272 TRERF1Q96PN7 1200 aa9.88□□□□□ -0.83
FARP1-241ENST00000602272 GRIP2Q9C0E4 1043 aa9.88□□□□□ -0.83
FARP1-241ENST00000602272 ZNF335Q9H4Z2 1342 aaPredicted RBP9.87□□□□□ -0.83
FARP1-241ENST00000602272 SPATA31C2B4DYI2 1134 aa9.87□□□□□ -0.83
FARP1-241ENST00000602272 ARID3AQ99856 593 aa9.87□□□□□ -0.83
FARP1-241ENST00000602272 MAFBQ9Y5Q3 323 aaPredicted RBP9.87□□□□□ -0.83
FARP1-241ENST00000602272 CPS1P31327 1500 aa9.87□□□□□ -0.83
FARP1-241ENST00000602272 CHD2O14647 1828 aaKnown RBP9.86□□□□□ -0.83
FARP1-241ENST00000602272 NRXN1Q9ULB1 1477 aa9.86□□□□□ -0.83
FARP1-241ENST00000602272 LAMC1P11047 1609 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms