RNA–Protein interactions for RNA: ENST00000599689.1

SHD-204, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 5 BASIC

Gene SHD, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-204ENST00000599689 TTC22Q5TAA0 569 aa28.48■■■□□ 2.15
SHD-204ENST00000599689 ARXQ96QS3 562 aa28.48■■■□□ 2.15
SHD-204ENST00000599689 AFDNP55196 1824 aaKnown RBP28.47■■■□□ 2.15
SHD-204ENST00000599689 NEURL1BA8MQ27 555 aa28.47■■■□□ 2.15
SHD-204ENST00000599689 SRGAP3O43295 1099 aa28.47■■■□□ 2.15
SHD-204ENST00000599689 POLD1P28340 1107 aa28.47■■■□□ 2.15
SHD-204ENST00000599689 MYD88Q99836 296 aa28.47■■■□□ 2.15
SHD-204ENST00000599689 SSFA2P28290 1259 aa28.46■■■□□ 2.15
SHD-204ENST00000599689 PLBD2Q8NHP8 589 aa28.46■■■□□ 2.15
SHD-204ENST00000599689 BCL11AQ9H165 835 aa28.46■■■□□ 2.15
SHD-204ENST00000599689 RAB11FIP3O75154 756 aa28.46■■■□□ 2.15
SHD-204ENST00000599689 GSPT1P15170 499 aaKnown RBP28.46■■■□□ 2.15
SHD-204ENST00000599689 ERICH6Q7L0X2 663 aa28.46■■■□□ 2.15
SHD-204ENST00000599689 AMIGO3Q86WK7 504 aa28.46■■■□□ 2.15
SHD-204ENST00000599689 VSIG10Q8N0Z9 540 aa28.46■■■□□ 2.15
SHD-204ENST00000599689 ZNF831Q5JPB2 1677 aa28.45■■■□□ 2.15
SHD-204ENST00000599689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.45■■■□□ 2.14
SHD-204ENST00000599689 GNPATO15228 680 aa28.45■■■□□ 2.14
SHD-204ENST00000599689 TBC1D32Q96NH3 1257 aa28.45■■■□□ 2.14
SHD-204ENST00000599689 PHF14O94880 888 aa28.44■■■□□ 2.14
SHD-204ENST00000599689 A1BGP04217 495 aa28.44■■■□□ 2.14
SHD-204ENST00000599689 TEX13AQ9BXU3 409 aaPredicted RBP28.44■■■□□ 2.14
SHD-204ENST00000599689 GCKRQ14397 625 aa28.43■■■□□ 2.14
SHD-204ENST00000599689 RC3H1Q5TC82 1133 aaKnown RBP28.43■■■□□ 2.14
SHD-204ENST00000599689 OSBPL3Q9H4L5 887 aa28.43■■■□□ 2.14
SHD-204ENST00000599689 SURF6O75683 361 aaKnown RBP28.43■■■□□ 2.14
SHD-204ENST00000599689 FHDC1Q9C0D6 1143 aaPredicted RBP28.43■■■□□ 2.14
SHD-204ENST00000599689 SUCLG2Q96I99 432 aa28.42■■■□□ 2.14
SHD-204ENST00000599689 CNTNAP4Q9C0A0 1308 aa28.41■■■□□ 2.14
SHD-204ENST00000599689 MFAP1P55081 439 aaKnown RBP28.41■■■□□ 2.14
SHD-204ENST00000599689 SALL3Q9BXA9 1300 aa28.41■■■□□ 2.14
SHD-204ENST00000599689 HSP90AB4PQ58FF6 505 aa28.4■■■□□ 2.14
SHD-204ENST00000599689 SMIM5Q71RC9 77 aa28.4■■■□□ 2.14
SHD-204ENST00000599689 SYT17Q9BSW7 474 aa28.4■■■□□ 2.14
SHD-204ENST00000599689 CDC45O75419 566 aa28.4■■■□□ 2.14
SHD-204ENST00000599689 PDE1AP54750 535 aa28.4■■■□□ 2.14
SHD-204ENST00000599689 KAZALD1Q96I82 304 aa28.4■■■□□ 2.14
SHD-204ENST00000599689 RTCBQ9Y3I0 505 aaKnown RBP28.4■■■□□ 2.14
SHD-204ENST00000599689 TBC1D9Q6ZT07 1266 aa28.39■■■□□ 2.14
SHD-204ENST00000599689 MSL1Q68DK7 614 aa28.38■■■□□ 2.13
SHD-204ENST00000599689 COL24A1Q17RW2 1714 aa28.38■■■□□ 2.13
SHD-204ENST00000599689 UBR3Q6ZT12 1888 aa28.38■■■□□ 2.13
SHD-204ENST00000599689 TTLL7Q6ZT98 887 aa28.38■■■□□ 2.13
SHD-204ENST00000599689 DNAJC10Q8IXB1 793 aa28.38■■■□□ 2.13
SHD-204ENST00000599689 RHPN1Q8TCX5 695 aa28.37■■■□□ 2.13
SHD-204ENST00000599689 KIF1BPQ96EK5 621 aa28.37■■■□□ 2.13
SHD-204ENST00000599689 C22orf23Q9BZE7 217 aa28.37■■■□□ 2.13
SHD-204ENST00000599689 BICC1Q9H694 974 aaKnown RBP28.37■■■□□ 2.13
SHD-204ENST00000599689 TRAPPC3LQ5T215 181 aa28.36■■■□□ 2.13
SHD-204ENST00000599689 RPS6KA4O75676 772 aa28.35■■■□□ 2.13
SHD-204ENST00000599689 ADRA2BP18089 450 aa28.35■■■□□ 2.13
SHD-204ENST00000599689 STARD3NLO95772 234 aa28.35■■■□□ 2.13
SHD-204ENST00000599689 MX1P20591 662 aa28.35■■■□□ 2.13
SHD-204ENST00000599689 CRKLP46109 303 aaKnown RBP28.35■■■□□ 2.13
SHD-204ENST00000599689 STAP2Q9UGK3 403 aa28.35■■■□□ 2.13
SHD-204ENST00000599689 COL15A1P39059 1388 aa28.34■■■□□ 2.13
SHD-204ENST00000599689 ATP5J2-PTCD1G3V325 749 aa28.34■■■□□ 2.13
SHD-204ENST00000599689 SDSP20132 328 aa28.34■■■□□ 2.13
SHD-204ENST00000599689 COL5A3P25940 1745 aaPredicted RBP28.33■■■□□ 2.13
SHD-204ENST00000599689 EIF5BO60841 1220 aaKnown RBP28.33■■■□□ 2.13
SHD-204ENST00000599689 IL1RAPL2Q9NP60 686 aa28.33■■■□□ 2.13
SHD-204ENST00000599689 CICQ96RK0 1608 aaPredicted RBP28.32■■■□□ 2.12
SHD-204ENST00000599689 DCAF8L1A6NGE4 600 aa28.32■■■□□ 2.12
SHD-204ENST00000599689 AOX1Q06278 1338 aa28.31■■■□□ 2.12
SHD-204ENST00000599689 ARHGEF1Q92888 912 aaKnown RBP28.31■■■□□ 2.12
SHD-204ENST00000599689 DAXXQ9UER7 740 aaPredicted RBP28.31■■■□□ 2.12
SHD-204ENST00000599689 A0A087WZG4 1122 aa28.3■■■□□ 2.12
SHD-204ENST00000599689 OS9Q13438 667 aaPredicted RBP28.3■■■□□ 2.12
SHD-204ENST00000599689 INTS5Q6P9B9 1019 aaKnown RBP28.29■■■□□ 2.12
SHD-204ENST00000599689 ERC1Q8IUD2 1116 aa28.29■■■□□ 2.12
SHD-204ENST00000599689 KLHL34Q8N239 644 aa28.29■■■□□ 2.12
SHD-204ENST00000599689 TJP1Q07157 1748 aa28.29■■■□□ 2.12
SHD-204ENST00000599689 CASP7P55210 303 aa28.29■■■□□ 2.12
SHD-204ENST00000599689 EPHA10Q5JZY3 1008 aa28.29■■■□□ 2.12
SHD-204ENST00000599689 UBE3BQ7Z3V4 1068 aa28.29■■■□□ 2.12
SHD-204ENST00000599689 ZBTB3Q9H5J0 574 aa28.29■■■□□ 2.12
SHD-204ENST00000599689 CYP19A1P11511 503 aaPredicted RBP28.28■■■□□ 2.12
SHD-204ENST00000599689 RFC4P35249 363 aa28.28■■■□□ 2.12
SHD-204ENST00000599689 CCDC87Q9NVE4 849 aa28.28■■■□□ 2.12
SHD-204ENST00000599689 CWC25Q9NXE8 425 aaPredicted RBP28.28■■■□□ 2.12
SHD-204ENST00000599689 PA2G4Q9UQ80 394 aaKnown RBP28.28■■■□□ 2.12
SHD-204ENST00000599689 H7C1W4 665 aa28.27■■■□□ 2.12
SHD-204ENST00000599689 RBM25P49756 843 aaKnown RBP28.27■■■□□ 2.12
SHD-204ENST00000599689 CASC1Q6TDU7 716 aa28.26■■■□□ 2.12
SHD-204ENST00000599689 NUTM1Q86Y26 1132 aa28.26■■■□□ 2.12
SHD-204ENST00000599689 JARID2Q92833 1246 aaPredicted RBP28.26■■■□□ 2.12
SHD-204ENST00000599689 RABL6Q3YEC7 729 aaPredicted RBP28.26■■■□□ 2.11
SHD-204ENST00000599689 TSHZ3Q63HK5 1081 aa28.26■■■□□ 2.11
SHD-204ENST00000599689 CCDC191Q8NCU4 936 aa28.26■■■□□ 2.11
SHD-204ENST00000599689 KIF6Q6ZMV9 814 aa28.25■■■□□ 2.11
SHD-204ENST00000599689 SLC4A3P48751 1232 aa28.24■■■□□ 2.11
SHD-204ENST00000599689 G3BP1Q13283 466 aaKnown RBP eCLIP28.24■■■□□ 2.11
SHD-204ENST00000599689 NLGN1Q8N2Q7 840 aa28.24■■■□□ 2.11
SHD-204ENST00000599689 MYH14Q7Z406 1995 aaKnown RBP28.24■■■□□ 2.11
SHD-204ENST00000599689 BECN1Q14457 450 aa28.23■■■□□ 2.11
SHD-204ENST00000599689 ANP32EQ9BTT0 268 aa28.23■■■□□ 2.11
SHD-204ENST00000599689 ZNF330Q9Y3S2 320 aaPredicted RBP28.23■■■□□ 2.11
SHD-204ENST00000599689 TCIRG1Q13488 830 aa28.23■■■□□ 2.11
SHD-204ENST00000599689 CLASRPQ8N2M8 674 aaKnown RBP28.23■■■□□ 2.11
SHD-204ENST00000599689 ISCA1Q9BUE6 129 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms