RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 GNAI1P63096 354 aa12□□□□□ -0.49
FARP1-226ENST00000599040 PARP10Q53GL7 1025 aa12□□□□□ -0.49
FARP1-226ENST00000599040 ERICH6BQ5W0A0 696 aa12□□□□□ -0.49
FARP1-226ENST00000599040 TTLL7Q6ZT98 887 aa12□□□□□ -0.49
FARP1-226ENST00000599040 RPGRQ92834 1020 aaKnown RBP12□□□□□ -0.49
FARP1-226ENST00000599040 CDCA7LQ96GN5 454 aa12□□□□□ -0.49
FARP1-226ENST00000599040 ZBTB3Q9H5J0 574 aa12□□□□□ -0.49
FARP1-226ENST00000599040 RIC1Q4ADV7 1423 aa12□□□□□ -0.49
FARP1-226ENST00000599040 WDR90Q96KV7 1748 aa12□□□□□ -0.49
FARP1-226ENST00000599040 CT47B1P0C2W7 299 aaPredicted RBP11.99□□□□□ -0.49
FARP1-226ENST00000599040 FKBP4Q02790 459 aaKnown RBP eCLIP11.99□□□□□ -0.49
FARP1-226ENST00000599040 GRIPAP1Q4V328 841 aa11.99□□□□□ -0.49
FARP1-226ENST00000599040 HSP90AB3PQ58FF7 597 aa11.99□□□□□ -0.49
FARP1-226ENST00000599040 CC2D2BQ6DHV5 1058 aa11.99□□□□□ -0.49
FARP1-226ENST00000599040 GIGYF2Q6Y7W6 1299 aaKnown RBP11.99□□□□□ -0.49
FARP1-226ENST00000599040 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
FARP1-226ENST00000599040 RNF123Q5XPI4 1314 aa11.98□□□□□ -0.49
FARP1-226ENST00000599040 IQCA1LA6NCM1 817 aa11.98□□□□□ -0.49
FARP1-226ENST00000599040 GPTP24298 496 aa11.98□□□□□ -0.49
FARP1-226ENST00000599040 DUSP27Q5VZP5 1158 aa11.98□□□□□ -0.49
FARP1-226ENST00000599040 RBM17Q96I25 401 aaKnown RBP11.98□□□□□ -0.49
FARP1-226ENST00000599040 HOXB7P09629 217 aa11.97□□□□□ -0.49
FARP1-226ENST00000599040 CRY2Q49AN0 593 aa11.97□□□□□ -0.49
FARP1-226ENST00000599040 NUTM1Q86Y26 1132 aa11.97□□□□□ -0.49
FARP1-226ENST00000599040 ZNF34Q8IZ26 560 aa11.97□□□□□ -0.49
FARP1-226ENST00000599040 TRMT2AQ8IZ69 625 aaKnown RBP11.97□□□□□ -0.49
FARP1-226ENST00000599040 C7orf43Q8WVR3 580 aa11.97□□□□□ -0.49
FARP1-226ENST00000599040 TRIM35Q9UPQ4 493 aa11.97□□□□□ -0.49
FARP1-226ENST00000599040 LAS1LQ9Y4W2 734 aaKnown RBP11.97□□□□□ -0.49
FARP1-226ENST00000599040 ABCC12Q96J65 1359 aa11.96□□□□□ -0.49
FARP1-226ENST00000599040 UBN2Q6ZU65 1347 aa11.96□□□□□ -0.49
FARP1-226ENST00000599040 CHL1O00533 1208 aa11.96□□□□□ -0.49
FARP1-226ENST00000599040 NLRP3Q96P20 1036 aa11.96□□□□□ -0.49
FARP1-226ENST00000599040 UTP14AQ9BVJ6 771 aaKnown RBP11.96□□□□□ -0.49
FARP1-226ENST00000599040 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.49
FARP1-226ENST00000599040 IFT57Q9NWB7 429 aa11.96□□□□□ -0.49
FARP1-226ENST00000599040 NTSR2O95665 410 aa11.95□□□□□ -0.5
FARP1-226ENST00000599040 HOXA10P31260 410 aaPredicted RBP11.95□□□□□ -0.5
FARP1-226ENST00000599040 SUSD4Q5VX71 490 aa11.95□□□□□ -0.5
FARP1-226ENST00000599040 JDP2Q8WYK2 163 aa11.95□□□□□ -0.5
FARP1-226ENST00000599040 CFAP44Q96MT7 982 aa11.95□□□□□ -0.5
FARP1-226ENST00000599040 CRAMP1Q96RY5 1269 aa11.95□□□□□ -0.5
FARP1-226ENST00000599040 PSMD1Q99460 953 aa11.95□□□□□ -0.5
FARP1-226ENST00000599040 CHMP4AQ9BY43 222 aa11.95□□□□□ -0.5
FARP1-226ENST00000599040 ANKRD36CQ5JPF3 1778 aa11.95□□□□□ -0.5
FARP1-226ENST00000599040 IARSP41252 1262 aaKnown RBP11.94□□□□□ -0.5
FARP1-226ENST00000599040 PDIA6Q15084 440 aa11.94□□□□□ -0.5
FARP1-226ENST00000599040 HDGFL1Q5TGJ6 251 aa11.94□□□□□ -0.5
FARP1-226ENST00000599040 COPS6Q7L5N1 327 aa11.94□□□□□ -0.5
FARP1-226ENST00000599040 ZNF428Q96B54 188 aa11.94□□□□□ -0.5
FARP1-226ENST00000599040 KLRG1Q96E93 195 aa11.94□□□□□ -0.5
FARP1-226ENST00000599040 ZNF277Q9NRM2 450 aaPredicted RBP11.94□□□□□ -0.5
FARP1-226ENST00000599040 SCN4AP35499 1836 aa11.94□□□□□ -0.5
FARP1-226ENST00000599040 PPEF1O14829 653 aaPredicted RBP11.93□□□□□ -0.5
FARP1-226ENST00000599040 DDNO94850 711 aaPredicted RBP11.93□□□□□ -0.5
FARP1-226ENST00000599040 MS4A1P11836 297 aa11.93□□□□□ -0.5
FARP1-226ENST00000599040 RRP1P56182 461 aaKnown RBP11.93□□□□□ -0.5
FARP1-226ENST00000599040 AIMP1Q12904 312 aaKnown RBP11.93□□□□□ -0.5
FARP1-226ENST00000599040 PROSER3Q2NL68 480 aa11.93□□□□□ -0.5
FARP1-226ENST00000599040 LRP10Q7Z4F1 713 aa11.93□□□□□ -0.5
FARP1-226ENST00000599040 SYNE4Q8N205 404 aa11.93□□□□□ -0.5
FARP1-226ENST00000599040 DNAJC5GQ8N7S2 189 aa11.93□□□□□ -0.5
FARP1-226ENST00000599040 XAGE3Q8WTP9 111 aa11.93□□□□□ -0.5
FARP1-226ENST00000599040 NECTIN2Q92692 538 aa11.93□□□□□ -0.5
FARP1-226ENST00000599040 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
FARP1-226ENST00000599040 DBF4Q9UBU7 674 aaPredicted RBP11.93□□□□□ -0.5
FARP1-226ENST00000599040 FANCIQ9NVI1 1328 aa11.92□□□□□ -0.5
FARP1-226ENST00000599040 POTECB2RU33 542 aa11.92□□□□□ -0.5
FARP1-226ENST00000599040 ANXA1P04083 346 aa11.92□□□□□ -0.5
FARP1-226ENST00000599040 EIF6P56537 245 aaKnown RBP11.92□□□□□ -0.5
FARP1-226ENST00000599040 TCIRG1Q13488 830 aa11.92□□□□□ -0.5
FARP1-226ENST00000599040 SLC10A5Q5PT55 438 aa11.92□□□□□ -0.5
FARP1-226ENST00000599040 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
FARP1-226ENST00000599040 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
FARP1-226ENST00000599040 CHPF2Q9P2E5 772 aa11.92□□□□□ -0.5
FARP1-226ENST00000599040 PCNTO95613 3336 aa11.92□□□□□ -0.5
FARP1-226ENST00000599040 SH3TC1Q8TE82 1336 aa11.91□□□□□ -0.5
FARP1-226ENST00000599040 OLFM4Q6UX06 510 aa11.91□□□□□ -0.5
FARP1-226ENST00000599040 NLRP10Q86W26 655 aa11.91□□□□□ -0.5
FARP1-226ENST00000599040 LDHDQ86WU2 507 aa11.91□□□□□ -0.5
FARP1-226ENST00000599040 GPC2Q8N158 579 aa11.91□□□□□ -0.5
FARP1-226ENST00000599040 SUPT20HQ8NEM7 779 aa11.91□□□□□ -0.5
FARP1-226ENST00000599040 PLBD2Q8NHP8 589 aa11.91□□□□□ -0.5
FARP1-226ENST00000599040 TRMT112Q9UI30 125 aaKnown RBP11.91□□□□□ -0.5
FARP1-226ENST00000599040 HACL1Q9UJ83 578 aa11.91□□□□□ -0.5
FARP1-226ENST00000599040 FZD9O00144 591 aa11.9□□□□□ -0.5
FARP1-226ENST00000599040 HSP90B1P14625 803 aaKnown RBP11.9□□□□□ -0.5
FARP1-226ENST00000599040 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
FARP1-226ENST00000599040 DDX46Q7L014 1031 aaKnown RBP11.9□□□□□ -0.5
FARP1-226ENST00000599040 TMC4Q7Z404 712 aa11.9□□□□□ -0.5
FARP1-226ENST00000599040 PNMA8AQ86V59 439 aaPredicted RBP11.9□□□□□ -0.5
FARP1-226ENST00000599040 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
FARP1-226ENST00000599040 VPS33BQ9H267 617 aa11.9□□□□□ -0.5
FARP1-226ENST00000599040 TAF1DQ9H5J8 278 aaPredicted RBP11.9□□□□□ -0.5
FARP1-226ENST00000599040 SPINK5Q9NQ38 1064 aaPredicted RBP11.9□□□□□ -0.5
FARP1-226ENST00000599040 ZNF541Q9H0D2 1346 aa11.89□□□□□ -0.51
FARP1-226ENST00000599040 SNED1Q8TER0 1413 aa11.89□□□□□ -0.51
FARP1-226ENST00000599040 BBOX1O75936 387 aa11.89□□□□□ -0.51
FARP1-226ENST00000599040 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
FARP1-226ENST00000599040 HTRA3P83110 453 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms