RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 LARGE2Q8N3Y3 721 aa18.56■□□□□ 0.56
SHKBP1-208ENST00000595726 ZNF652Q9Y2D9 606 aa18.56■□□□□ 0.56
SHKBP1-208ENST00000595726 BCORQ6W2J9 1755 aa18.55■□□□□ 0.56
SHKBP1-208ENST00000595726 NBPF26B4DH59 902 aa18.55■□□□□ 0.56
SHKBP1-208ENST00000595726 TCERG1O14776 1098 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-208ENST00000595726 CELF2O95319 508 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-208ENST00000595726 GTF2E1P29083 439 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-208ENST00000595726 CIAPIN1Q6FI81 312 aa18.55■□□□□ 0.56
SHKBP1-208ENST00000595726 NBPF10Q6P3W6 841 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-208ENST00000595726 NBPF15Q8N660 670 aa18.55■□□□□ 0.56
SHKBP1-208ENST00000595726 ZIC5Q96T25 663 aa18.55■□□□□ 0.56
SHKBP1-208ENST00000595726 CA12O43570 354 aa18.54■□□□□ 0.56
SHKBP1-208ENST00000595726 GLIS2Q9BZE0 524 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-208ENST00000595726 U2SURPO15042 1029 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-208ENST00000595726 NUTM1Q86Y26 1132 aa18.53■□□□□ 0.56
SHKBP1-208ENST00000595726 ZNF408Q9H9D4 720 aa18.53■□□□□ 0.56
SHKBP1-208ENST00000595726 BRPF1P55201 1214 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-208ENST00000595726 SOX10P56693 466 aa18.52■□□□□ 0.56
SHKBP1-208ENST00000595726 EIF4G2P78344 907 aaKnown RBP eCLIP18.52■□□□□ 0.56
SHKBP1-208ENST00000595726 GAS2L2Q8NHY3 880 aa18.52■□□□□ 0.56
SHKBP1-208ENST00000595726 ABCC12Q96J65 1359 aa18.52■□□□□ 0.55
SHKBP1-208ENST00000595726 SIPA1L3O60292 1781 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-208ENST00000595726 CRY2Q49AN0 593 aa18.51■□□□□ 0.55
SHKBP1-208ENST00000595726 ADARB2Q9NS39 739 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-208ENST00000595726 GPRC5DQ9NZD1 345 aa18.51■□□□□ 0.55
SHKBP1-208ENST00000595726 TRPM7Q96QT4 1865 aa18.51■□□□□ 0.55
SHKBP1-208ENST00000595726 CC2D2BQ6DHV5 1058 aa18.5■□□□□ 0.55
SHKBP1-208ENST00000595726 PHACTR3Q96KR7 559 aa18.5■□□□□ 0.55
SHKBP1-208ENST00000595726 CEMIPQ8WUJ3 1361 aa18.5■□□□□ 0.55
SHKBP1-208ENST00000595726 SNRPA1P09661 255 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-208ENST00000595726 DLK2Q6UY11 383 aa18.49■□□□□ 0.55
SHKBP1-208ENST00000595726 NIM1KQ8IY84 436 aa18.49■□□□□ 0.55
SHKBP1-208ENST00000595726 NGEFQ8N5V2 710 aa18.49■□□□□ 0.55
SHKBP1-208ENST00000595726 CXCL9Q07325 125 aa18.48■□□□□ 0.55
SHKBP1-208ENST00000595726 CNGB1Q14028 1251 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-208ENST00000595726 AOC3Q16853 763 aa18.48■□□□□ 0.55
SHKBP1-208ENST00000595726 CC2D1BQ5T0F9 858 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-208ENST00000595726 RPGRQ92834 1020 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-208ENST00000595726 HHIPL1Q96JK4 782 aa18.48■□□□□ 0.55
SHKBP1-208ENST00000595726 PPIP5K2O43314 1243 aa18.47■□□□□ 0.55
SHKBP1-208ENST00000595726 GMPSP49915 693 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-208ENST00000595726 HIRAP54198 1017 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-208ENST00000595726 HOXA10P31260 410 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-208ENST00000595726 PGAP2Q9UHJ9 254 aa18.46■□□□□ 0.55
SHKBP1-208ENST00000595726 NPC1L1Q9UHC9 1359 aa18.45■□□□□ 0.54
SHKBP1-208ENST00000595726 PPEF1O14829 653 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-208ENST00000595726 GPTP24298 496 aa18.45■□□□□ 0.54
SHKBP1-208ENST00000595726 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
SHKBP1-208ENST00000595726 MCM10Q7L590 875 aa18.45■□□□□ 0.54
SHKBP1-208ENST00000595726 SHTN1A0MZ66 631 aa18.44■□□□□ 0.54
SHKBP1-208ENST00000595726 RGL2O15211 777 aa18.44■□□□□ 0.54
SHKBP1-208ENST00000595726 NOGQ13253 232 aa18.44■□□□□ 0.54
SHKBP1-208ENST00000595726 NYXQ9GZU5 481 aa18.44■□□□□ 0.54
SHKBP1-208ENST00000595726 HUNKP57058 714 aa18.43■□□□□ 0.54
SHKBP1-208ENST00000595726 DCTN1Q14203 1278 aa18.43■□□□□ 0.54
SHKBP1-208ENST00000595726 USP48Q86UV5 1035 aa18.43■□□□□ 0.54
SHKBP1-208ENST00000595726 TRPM4Q8TD43 1214 aa18.43■□□□□ 0.54
SHKBP1-208ENST00000595726 CRAMP1Q96RY5 1269 aa18.43■□□□□ 0.54
SHKBP1-208ENST00000595726 ZNRF3Q9ULT6 936 aa18.43■□□□□ 0.54
SHKBP1-208ENST00000595726 RAD17O75943 681 aa18.42■□□□□ 0.54
SHKBP1-208ENST00000595726 PRKAR2BP31323 418 aa18.42■□□□□ 0.54
SHKBP1-208ENST00000595726 GRIPAP1Q4V328 841 aa18.42■□□□□ 0.54
SHKBP1-208ENST00000595726 SUSD4Q5VX71 490 aa18.42■□□□□ 0.54
SHKBP1-208ENST00000595726 CDC37L1Q7L3B6 337 aa18.42■□□□□ 0.54
SHKBP1-208ENST00000595726 RBM17Q96I25 401 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-208ENST00000595726 MIS18AQ9NYP9 233 aa18.42■□□□□ 0.54
SHKBP1-208ENST00000595726 COL3A1P02461 1466 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-208ENST00000595726 PRPF38BQ5VTL8 546 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-208ENST00000595726 TTLL7Q6ZT98 887 aa18.41■□□□□ 0.54
SHKBP1-208ENST00000595726 UBN2Q6ZU65 1347 aa18.41■□□□□ 0.54
SHKBP1-208ENST00000595726 FAM155AB1AL88 458 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-208ENST00000595726 PER1O15534 1290 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-208ENST00000595726 TRPA1O75762 1119 aa18.4■□□□□ 0.54
SHKBP1-208ENST00000595726 KIF23Q02241 960 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-208ENST00000595726 ZC3H15Q8WU90 426 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-208ENST00000595726 BCL2L13Q9BXK5 485 aa18.4■□□□□ 0.54
SHKBP1-208ENST00000595726 KIF7Q2M1P5 1343 aa18.4■□□□□ 0.54
SHKBP1-208ENST00000595726 RNF186Q9NXI6 227 aa18.39■□□□□ 0.53
SHKBP1-208ENST00000595726 CNOT7Q9UIV1 285 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-208ENST00000595726 RRP7AQ9Y3A4 280 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-208ENST00000595726 ATP6V0A2Q9Y487 856 aa18.39■□□□□ 0.53
SHKBP1-208ENST00000595726 ERVV-1B6SEH8 477 aa18.38■□□□□ 0.53
SHKBP1-208ENST00000595726 RTF1Q92541 710 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-208ENST00000595726 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
SHKBP1-208ENST00000595726 ZBTB3Q9H5J0 574 aa18.38■□□□□ 0.53
SHKBP1-208ENST00000595726 MAP3K15Q6ZN16 1313 aa18.38■□□□□ 0.53
SHKBP1-208ENST00000595726 RGMBQ6NW40 437 aa18.37■□□□□ 0.53
SHKBP1-208ENST00000595726 RIC1Q4ADV7 1423 aa18.37■□□□□ 0.53
SHKBP1-208ENST00000595726 NTSR2O95665 410 aa18.36■□□□□ 0.53
SHKBP1-208ENST00000595726 MYL6BP14649 208 aa18.36■□□□□ 0.53
SHKBP1-208ENST00000595726 RTFDC1Q9BY42 306 aaPredicted RBP18.36■□□□□ 0.53
SHKBP1-208ENST00000595726 TMX4Q9H1E5 349 aaPredicted RBP18.36■□□□□ 0.53
SHKBP1-208ENST00000595726 VPS33BQ9H267 617 aa18.36■□□□□ 0.53
SHKBP1-208ENST00000595726 ZBTB12Q9Y330 459 aaPredicted RBP18.36■□□□□ 0.53
SHKBP1-208ENST00000595726 YDJCA8MPS7 323 aa18.35■□□□□ 0.53
SHKBP1-208ENST00000595726 ZNF157P51786 506 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-208ENST00000595726 TNIP1Q15025 636 aa18.35■□□□□ 0.53
SHKBP1-208ENST00000595726 DPP8Q6V1X1 898 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-208ENST00000595726 SAMD7Q7Z3H4 446 aa18.35■□□□□ 0.53
SHKBP1-208ENST00000595726 ZNF34Q8IZ26 560 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms