RNA–Protein interactions for RNA: ENST00000592385.5

HDAC5-211, Transcript of histone deacetylase 5, humanhuman

TSL 5

Gene HDAC5, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-211ENST00000592385 DCCP43146 1447 aa18.34■□□□□ 0.53
HDAC5-211ENST00000592385 SYT1P21579 422 aa18.34■□□□□ 0.53
HDAC5-211ENST00000592385 MAP4K1Q92918 833 aa18.34■□□□□ 0.53
HDAC5-211ENST00000592385 PKD1L3Q7Z443 1732 aa18.33■□□□□ 0.53
HDAC5-211ENST00000592385 COL15A1P39059 1388 aa18.33■□□□□ 0.53
HDAC5-211ENST00000592385 COPS6Q7L5N1 327 aa18.33■□□□□ 0.53
HDAC5-211ENST00000592385 SNRPA1P09661 255 aaKnown RBP18.33■□□□□ 0.52
HDAC5-211ENST00000592385 ADCK5Q3MIX3 580 aa18.33■□□□□ 0.52
HDAC5-211ENST00000592385 ZNF496Q96IT1 587 aaPredicted RBP18.33■□□□□ 0.52
HDAC5-211ENST00000592385 DCAF5Q96JK2 942 aa18.33■□□□□ 0.52
HDAC5-211ENST00000592385 CCDC8Q9H0W5 538 aaPredicted RBP18.33■□□□□ 0.52
HDAC5-211ENST00000592385 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.33■□□□□ 0.52
HDAC5-211ENST00000592385 MYL6BP14649 208 aa18.32■□□□□ 0.52
HDAC5-211ENST00000592385 LRP10Q7Z4F1 713 aa18.32■□□□□ 0.52
HDAC5-211ENST00000592385 RBM8AQ9Y5S9 174 aaKnown RBP18.32■□□□□ 0.52
HDAC5-211ENST00000592385 ATF3P18847 181 aa18.32■□□□□ 0.52
HDAC5-211ENST00000592385 NMIQ13287 307 aaPredicted RBP18.32■□□□□ 0.52
HDAC5-211ENST00000592385 CREB3L3Q68CJ9 461 aa18.32■□□□□ 0.52
HDAC5-211ENST00000592385 NAP1L5Q96NT1 182 aaPredicted RBP18.32■□□□□ 0.52
HDAC5-211ENST00000592385 MYD88Q99836 296 aa18.32■□□□□ 0.52
HDAC5-211ENST00000592385 TSPY26PQ9H489 355 aa18.32■□□□□ 0.52
HDAC5-211ENST00000592385 COPRSQ9NQ92 184 aa18.32■□□□□ 0.52
HDAC5-211ENST00000592385 AFDNP55196 1824 aaKnown RBP18.31■□□□□ 0.52
HDAC5-211ENST00000592385 GADD45BO75293 160 aaPredicted RBP18.31■□□□□ 0.52
HDAC5-211ENST00000592385 F13A1P00488 732 aa18.31■□□□□ 0.52
HDAC5-211ENST00000592385 CPA1P15085 419 aa18.31■□□□□ 0.52
HDAC5-211ENST00000592385 ANKRD13DQ6ZTN6 518 aa18.31■□□□□ 0.52
HDAC5-211ENST00000592385 FAM227BQ96M60 508 aa18.31■□□□□ 0.52
HDAC5-211ENST00000592385 GDPD2Q9HCC8 539 aa18.31■□□□□ 0.52
HDAC5-211ENST00000592385 LARGE1O95461 756 aa18.3■□□□□ 0.52
HDAC5-211ENST00000592385 PDIA4P13667 645 aaKnown RBP18.3■□□□□ 0.52
HDAC5-211ENST00000592385 MSNP26038 577 aaKnown RBP18.3■□□□□ 0.52
HDAC5-211ENST00000592385 PSMA5P28066 241 aa18.3■□□□□ 0.52
HDAC5-211ENST00000592385 TTC5Q8N0Z6 440 aa18.3■□□□□ 0.52
HDAC5-211ENST00000592385 KLHL34Q8N239 644 aa18.3■□□□□ 0.52
HDAC5-211ENST00000592385 SIL1Q9H173 461 aa18.3■□□□□ 0.52
HDAC5-211ENST00000592385 TLR7Q9NYK1 1049 aaKnown RBP18.3■□□□□ 0.52
HDAC5-211ENST00000592385 MED23Q9ULK4 1368 aa18.3■□□□□ 0.52
HDAC5-211ENST00000592385 FOXD4L6Q3SYB3 417 aaPredicted RBP18.3■□□□□ 0.52
HDAC5-211ENST00000592385 FOXD4L3Q6VB84 417 aaPredicted RBP18.3■□□□□ 0.52
HDAC5-211ENST00000592385 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
HDAC5-211ENST00000592385 LAMB4A4D0S4 1761 aa18.3■□□□□ 0.52
HDAC5-211ENST00000592385 ARFGEF2Q9Y6D5 1785 aa18.3■□□□□ 0.52
HDAC5-211ENST00000592385 JCADQ9P266 1359 aa18.29■□□□□ 0.52
HDAC5-211ENST00000592385 KCNJ4P48050 445 aa18.29■□□□□ 0.52
HDAC5-211ENST00000592385 EPHA10Q5JZY3 1008 aa18.29■□□□□ 0.52
HDAC5-211ENST00000592385 RNF20Q5VTR2 975 aa18.29■□□□□ 0.52
HDAC5-211ENST00000592385 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
HDAC5-211ENST00000592385 FSD1Q9BTV5 496 aa18.29■□□□□ 0.52
HDAC5-211ENST00000592385 BOLA2Q9H3K6 86 aa18.29■□□□□ 0.52
HDAC5-211ENST00000592385 PARP4Q9UKK3 1724 aaKnown RBP18.29■□□□□ 0.52
HDAC5-211ENST00000592385 GJB2P29033 226 aa18.29■□□□□ 0.52
HDAC5-211ENST00000592385 UBE2HP62256 183 aa18.29■□□□□ 0.52
HDAC5-211ENST00000592385 CCDC83Q8IWF9 413 aa18.29■□□□□ 0.52
HDAC5-211ENST00000592385 NOL7Q9UMY1 257 aaKnown RBP18.29■□□□□ 0.52
HDAC5-211ENST00000592385 TNS3Q68CZ2 1445 aa18.28■□□□□ 0.52
HDAC5-211ENST00000592385 SLC27A2O14975 620 aa18.28■□□□□ 0.52
HDAC5-211ENST00000592385 CSB-PGBD3P0DP91 1061 aa18.28■□□□□ 0.52
HDAC5-211ENST00000592385 CSPP1Q1MSJ5 1256 aa18.28■□□□□ 0.52
HDAC5-211ENST00000592385 RABL6Q3YEC7 729 aaPredicted RBP18.28■□□□□ 0.52
HDAC5-211ENST00000592385 ALDH8A1Q9H2A2 487 aaPredicted RBP18.28■□□□□ 0.52
HDAC5-211ENST00000592385 CNPY2Q9Y2B0 182 aa18.28■□□□□ 0.52
HDAC5-211ENST00000592385 A0A0D9SFI3 127 aa18.28■□□□□ 0.52
HDAC5-211ENST00000592385 CYP27B1O15528 508 aa18.28■□□□□ 0.52
HDAC5-211ENST00000592385 LETM1O95202 739 aaPredicted RBP18.28■□□□□ 0.52
HDAC5-211ENST00000592385 CCDC183Q5T5S1 534 aa18.28■□□□□ 0.52
HDAC5-211ENST00000592385 FAM184AQ8NB25 1140 aa18.28■□□□□ 0.52
HDAC5-211ENST00000592385 USP16Q9Y5T5 823 aa18.28■□□□□ 0.52
HDAC5-211ENST00000592385 RFX5P48382 616 aaPredicted RBP18.27■□□□□ 0.52
HDAC5-211ENST00000592385 HMG20BQ9P0W2 317 aa18.27■□□□□ 0.52
HDAC5-211ENST00000592385 RFX7Q2KHR2 1363 aa18.27■□□□□ 0.52
HDAC5-211ENST00000592385 TMEM94Q12767 1356 aa18.27■□□□□ 0.51
HDAC5-211ENST00000592385 ATP5JP18859 108 aa18.27■□□□□ 0.51
HDAC5-211ENST00000592385 ANKRD1Q15327 319 aa18.27■□□□□ 0.51
HDAC5-211ENST00000592385 ME3Q16798 604 aa18.27■□□□□ 0.51
HDAC5-211ENST00000592385 KLHDC4Q8TBB5 520 aa18.27■□□□□ 0.51
HDAC5-211ENST00000592385 MTMR6Q9Y217 621 aa18.27■□□□□ 0.51
HDAC5-211ENST00000592385 TSGA10IPQ3SY00 556 aa18.26■□□□□ 0.51
HDAC5-211ENST00000592385 GLI3P10071 1580 aa18.26■□□□□ 0.51
HDAC5-211ENST00000592385 CPDO75976 1380 aa18.26■□□□□ 0.51
HDAC5-211ENST00000592385 PTPN12Q05209 780 aaKnown RBP18.26■□□□□ 0.51
HDAC5-211ENST00000592385 MCM5P33992 734 aa18.25■□□□□ 0.51
HDAC5-211ENST00000592385 ST3GAL1Q11201 340 aa18.25■□□□□ 0.51
HDAC5-211ENST00000592385 TNNI3KQ59H18 835 aa18.25■□□□□ 0.51
HDAC5-211ENST00000592385 FPGT-TNNI3KV9GXZ4 949 aa18.25■□□□□ 0.51
HDAC5-211ENST00000592385 STRCP1A6NGW2 1772 aa18.24■□□□□ 0.51
HDAC5-211ENST00000592385 UVSSAQ2YD98 709 aa18.24■□□□□ 0.51
HDAC5-211ENST00000592385 BLOC1S2Q6QNY1 142 aa18.24■□□□□ 0.51
HDAC5-211ENST00000592385 RNF214Q8ND24 703 aa18.24■□□□□ 0.51
HDAC5-211ENST00000592385 CCDC39Q9UFE4 941 aa18.24■□□□□ 0.51
HDAC5-211ENST00000592385 TPCN1Q9ULQ1 816 aa18.24■□□□□ 0.51
HDAC5-211ENST00000592385 PLBD2Q8NHP8 589 aa18.24■□□□□ 0.51
HDAC5-211ENST00000592385 DBNLQ9UJU6 430 aaKnown RBP18.24■□□□□ 0.51
HDAC5-211ENST00000592385 ZNF500O60304 480 aaPredicted RBP18.23■□□□□ 0.51
HDAC5-211ENST00000592385 CABP4P57796 275 aa18.23■□□□□ 0.51
HDAC5-211ENST00000592385 USPL1Q5W0Q7 1092 aa18.23■□□□□ 0.51
HDAC5-211ENST00000592385 DDX17Q92841 729 aaKnown RBP18.23■□□□□ 0.51
HDAC5-211ENST00000592385 OFD1O75665 1012 aa18.23■□□□□ 0.51
HDAC5-211ENST00000592385 RPS6KB1P23443 525 aa18.23■□□□□ 0.51
HDAC5-211ENST00000592385 UBE3BQ7Z3V4 1068 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms