RNA–Protein interactions for RNA: ENST00000592052.1

TMEM259-208, Transcript of transmembrane protein 259, human

Gene TMEM259, Length 1,637 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-208	ENST00000592052	TRMT112	Q9UI30	125 aa	Known RBP	31.38	■■■□□ 2.61
TMEM259-208	ENST00000592052	ABCC4	O15439	1325 aa		31.37	■■■□□ 2.61
TMEM259-208	ENST00000592052	NTSR2	O95665	410 aa		31.37	■■■□□ 2.61
TMEM259-208	ENST00000592052	GTF2E1	P29083	439 aa	Predicted RBP	31.37	■■■□□ 2.61
TMEM259-208	ENST00000592052	CCT4	P50991	539 aa	Known RBP	31.37	■■■□□ 2.61
TMEM259-208	ENST00000592052	CLUAP1	Q96AJ1	413 aa		31.37	■■■□□ 2.61
TMEM259-208	ENST00000592052	ALDH1L1	O75891	902 aa		31.36	■■■□□ 2.61
TMEM259-208	ENST00000592052	FTSJ3	Q8IY81	847 aa	Known RBP	31.36	■■■□□ 2.61
TMEM259-208	ENST00000592052	RNF123	Q5XPI4	1314 aa		31.36	■■■□□ 2.61
TMEM259-208	ENST00000592052	PLIN1	O60240	522 aa		31.35	■■■□□ 2.61
TMEM259-208	ENST00000592052	MS4A1	P11836	297 aa		31.35	■■■□□ 2.61
TMEM259-208	ENST00000592052	GCKR	Q14397	625 aa		31.35	■■■□□ 2.61
TMEM259-208	ENST00000592052	PRR5L	Q6MZQ0	368 aa		31.35	■■■□□ 2.61
TMEM259-208	ENST00000592052	DZIP1L	Q8IYY4	767 aa	Known RBP	31.35	■■■□□ 2.61
TMEM259-208	ENST00000592052	TNN	Q9UQP3	1299 aa		31.35	■■■□□ 2.61
TMEM259-208	ENST00000592052	NRXN2	Q9P2S2	1712 aa		31.34	■■■□□ 2.61
TMEM259-208	ENST00000592052	ST5	P78524	1137 aa		31.34	■■■□□ 2.61
TMEM259-208	ENST00000592052	NUTM1	Q86Y26	1132 aa		31.33	■■■□□ 2.61
TMEM259-208	ENST00000592052	SH3TC1	Q8TE82	1336 aa		31.33	■■■□□ 2.61
TMEM259-208	ENST00000592052	INTS3	Q68E01	1043 aa	Known RBP	31.32	■■■□□ 2.6
TMEM259-208	ENST00000592052	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	31.32	■■■□□ 2.6
TMEM259-208	ENST00000592052	PPP1R1B	Q9UD71	204 aa	Predicted RBP	31.32	■■■□□ 2.6
TMEM259-208	ENST00000592052	AFDN	P55196	1824 aa	Known RBP	31.32	■■■□□ 2.6
TMEM259-208	ENST00000592052	FAM89A	Q96GI7	184 aa		31.31	■■■□□ 2.6
TMEM259-208	ENST00000592052	PCCA	P05165	728 aa	Predicted RBP	31.31	■■■□□ 2.6
TMEM259-208	ENST00000592052	ERFE	Q4G0M1	354 aa		31.31	■■■□□ 2.6
TMEM259-208	ENST00000592052	RRP1	P56182	461 aa	Known RBP	31.3	■■■□□ 2.6
TMEM259-208	ENST00000592052	CCDC24	Q8N4L8	307 aa		31.3	■■■□□ 2.6
TMEM259-208	ENST00000592052	LRP5	O75197	1615 aa		31.29	■■■□□ 2.6
TMEM259-208	ENST00000592052	C9orf78	Q9NZ63	289 aa	Predicted RBP	31.29	■■■□□ 2.6
TMEM259-208	ENST00000592052	CENPB	P07199	599 aa	Predicted RBP	31.28	■■■□□ 2.6
TMEM259-208	ENST00000592052	RTL5	Q5HYW3	569 aa	Predicted RBP	31.28	■■■□□ 2.6
TMEM259-208	ENST00000592052	TMEM57	Q8N5G2	664 aa		31.28	■■■□□ 2.6
TMEM259-208	ENST00000592052	C10orf71	Q711Q0	1435 aa		31.28	■■■□□ 2.6
TMEM259-208	ENST00000592052	RLBP1	P12271	317 aa		31.27	■■■□□ 2.6
TMEM259-208	ENST00000592052	SYNE4	Q8N205	404 aa		31.27	■■■□□ 2.6
TMEM259-208	ENST00000592052	N4BP2	Q86UW6	1770 aa	Predicted RBP	31.27	■■■□□ 2.6
TMEM259-208	ENST00000592052		H7C1W4	665 aa		31.27	■■■□□ 2.6
TMEM259-208	ENST00000592052	GRM8	O00222	908 aa		31.27	■■■□□ 2.6
TMEM259-208	ENST00000592052	UBE3B	Q7Z3V4	1068 aa		31.27	■■■□□ 2.6
TMEM259-208	ENST00000592052	PANK1	Q8TE04	598 aa		31.27	■■■□□ 2.6
TMEM259-208	ENST00000592052	BRIP1	Q9BX63	1249 aa		31.27	■■■□□ 2.6
TMEM259-208	ENST00000592052	SRCAP	Q6ZRS2	3230 aa		31.26	■■■□□ 2.6
TMEM259-208	ENST00000592052	PDE3A	Q14432	1141 aa		31.26	■■■□□ 2.59
TMEM259-208	ENST00000592052	JARID2	Q92833	1246 aa	Predicted RBP	31.26	■■■□□ 2.59
TMEM259-208	ENST00000592052	ABCC12	Q96J65	1359 aa		31.26	■■■□□ 2.59
TMEM259-208	ENST00000592052	HSP90B1	P14625	803 aa	Known RBP	31.25	■■■□□ 2.59
TMEM259-208	ENST00000592052	SLC10A5	Q5PT55	438 aa		31.25	■■■□□ 2.59
TMEM259-208	ENST00000592052	KLHL34	Q8N239	644 aa		31.25	■■■□□ 2.59
TMEM259-208	ENST00000592052	CD2AP	Q9Y5K6	639 aa		31.25	■■■□□ 2.59
TMEM259-208	ENST00000592052	IRS4	O14654	1257 aa	Predicted RBP	31.24	■■■□□ 2.59
TMEM259-208	ENST00000592052	SUPT16H	Q9Y5B9	1047 aa	Known RBP	31.24	■■■□□ 2.59
TMEM259-208	ENST00000592052	ITPRIP	Q8IWB1	547 aa		31.24	■■■□□ 2.59
TMEM259-208	ENST00000592052	CDHR2	Q9BYE9	1310 aa		31.23	■■■□□ 2.59
TMEM259-208	ENST00000592052	HCLS1	P14317	486 aa	Predicted RBP	31.23	■■■□□ 2.59
TMEM259-208	ENST00000592052	PDE6B	P35913	854 aa		31.23	■■■□□ 2.59
TMEM259-208	ENST00000592052	USP44	Q9H0E7	712 aa		31.23	■■■□□ 2.59
TMEM259-208	ENST00000592052	RIC1	Q4ADV7	1423 aa		31.23	■■■□□ 2.59
TMEM259-208	ENST00000592052	UTY	O14607	1347 aa		31.21	■■■□□ 2.59
TMEM259-208	ENST00000592052	CASP7	P55210	303 aa		31.21	■■■□□ 2.59
TMEM259-208	ENST00000592052	C20orf194	Q5TEA3	1177 aa		31.21	■■■□□ 2.59
TMEM259-208	ENST00000592052	FHDC1	Q9C0D6	1143 aa	Predicted RBP	31.21	■■■□□ 2.59
TMEM259-208	ENST00000592052	NBPF7	P0C2Y1	421 aa	Predicted RBP	31.2	■■■□□ 2.59
TMEM259-208	ENST00000592052	NLRP3	Q96P20	1036 aa		31.2	■■■□□ 2.59
TMEM259-208	ENST00000592052	TGFB2	P61812	414 aa		31.19	■■■□□ 2.58
TMEM259-208	ENST00000592052	KIF13B	Q9NQT8	1826 aa		31.18	■■■□□ 2.58
TMEM259-208	ENST00000592052	PDZRN3	Q9UPQ7	1066 aa		31.18	■■■□□ 2.58
TMEM259-208	ENST00000592052	KLRG2	A4D1S0	409 aa	Predicted RBP	31.17	■■■□□ 2.58
TMEM259-208	ENST00000592052	PDE8A	O60658	829 aa		31.17	■■■□□ 2.58
TMEM259-208	ENST00000592052	MVP	Q14764	893 aa	Known RBP	31.17	■■■□□ 2.58
TMEM259-208	ENST00000592052	COG6	Q9Y2V7	657 aa		31.17	■■■□□ 2.58
TMEM259-208	ENST00000592052	GNAI3	P08754	354 aa		31.16	■■■□□ 2.58
TMEM259-208	ENST00000592052	UBTFL1	P0CB47	393 aa	Predicted RBP	31.16	■■■□□ 2.58
TMEM259-208	ENST00000592052	MEIS3	Q99687	375 aa		31.16	■■■□□ 2.58
TMEM259-208	ENST00000592052	ANKRD31	Q8N7Z5	1873 aa		31.16	■■■□□ 2.58
TMEM259-208	ENST00000592052	PLA2G12B	Q9BX93	195 aa		31.16	■■■□□ 2.58
TMEM259-208	ENST00000592052		H0YIN7	160 aa		31.15	■■■□□ 2.58
TMEM259-208	ENST00000592052	C3orf67	Q6ZVT6	689 aa		31.15	■■■□□ 2.58
TMEM259-208	ENST00000592052	C2CD5	Q86YS7	1000 aa		31.15	■■■□□ 2.58
TMEM259-208	ENST00000592052	HDAC5	Q9UQL6	1122 aa		31.15	■■■□□ 2.58
TMEM259-208	ENST00000592052	DDX60	Q8IY21	1712 aa	Known RBP	31.15	■■■□□ 2.58
TMEM259-208	ENST00000592052	TNRC6C	Q9HCJ0	1690 aa	Known RBP	31.15	■■■□□ 2.58
TMEM259-208	ENST00000592052	CRY2	Q49AN0	593 aa		31.14	■■■□□ 2.58
TMEM259-208	ENST00000592052	SYT17	Q9BSW7	474 aa		31.14	■■■□□ 2.58
TMEM259-208	ENST00000592052	DDX19B	Q9UMR2	479 aa		31.14	■■■□□ 2.58
TMEM259-208	ENST00000592052	LAMB2	P55268	1798 aa		31.14	■■■□□ 2.58
TMEM259-208	ENST00000592052	CHRNA5	P30532	468 aa		31.13	■■■□□ 2.57
TMEM259-208	ENST00000592052	CTSW	P56202	376 aa		31.13	■■■□□ 2.57
TMEM259-208	ENST00000592052	SUCLG2	Q96I99	432 aa		31.13	■■■□□ 2.57
TMEM259-208	ENST00000592052		A0A0G2JLW4	131 aa		31.12	■■■□□ 2.57
TMEM259-208	ENST00000592052	ZBTB7B	O15156	539 aa	Predicted RBP	31.12	■■■□□ 2.57
TMEM259-208	ENST00000592052	SRGN	P10124	158 aa		31.12	■■■□□ 2.57
TMEM259-208	ENST00000592052	DPEP1	P16444	411 aa		31.11	■■■□□ 2.57
TMEM259-208	ENST00000592052	SF3B3	Q15393	1217 aa	Known RBP	31.11	■■■□□ 2.57
TMEM259-208	ENST00000592052	NLGN2	Q8NFZ4	835 aa		31.11	■■■□□ 2.57
TMEM259-208	ENST00000592052	RPGR	Q92834	1020 aa	Known RBP	31.11	■■■□□ 2.57
TMEM259-208	ENST00000592052	NPR1	P16066	1061 aa		31.1	■■■□□ 2.57
TMEM259-208	ENST00000592052	CHMP4B	Q9H444	224 aa	Known RBP	31.1	■■■□□ 2.57
TMEM259-208	ENST00000592052	FOXO4	P98177	505 aa		31.09	■■■□□ 2.57
TMEM259-208	ENST00000592052	CCDC152	Q4G0S7	254 aa		31.09	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms