RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 CRY2Q49AN0 593 aa22.62■■□□□ 1.21
CIRBP-235ENST00000591935 XAGE3Q8WTP9 111 aa22.62■■□□□ 1.21
CIRBP-235ENST00000591935 ANKRD36CQ5JPF3 1778 aa22.61■■□□□ 1.21
CIRBP-235ENST00000591935 NTSR2O95665 410 aa22.61■■□□□ 1.21
CIRBP-235ENST00000591935 PARP10Q53GL7 1025 aa22.61■■□□□ 1.21
CIRBP-235ENST00000591935 PPP1R42Q7Z4L9 355 aa22.61■■□□□ 1.21
CIRBP-235ENST00000591935 CFAP44Q96MT7 982 aa22.61■■□□□ 1.21
CIRBP-235ENST00000591935 DDX21Q9NR30 783 aaKnown RBP eCLIP22.61■■□□□ 1.21
CIRBP-235ENST00000591935 RTKN2Q8IZC4 609 aa22.6■■□□□ 1.21
CIRBP-235ENST00000591935 RIC1Q4ADV7 1423 aa22.59■■□□□ 1.21
CIRBP-235ENST00000591935 POTECB2RU33 542 aa22.59■■□□□ 1.21
CIRBP-235ENST00000591935 ZNF853P0CG23 659 aa22.59■■□□□ 1.21
CIRBP-235ENST00000591935 HSP90AB3PQ58FF7 597 aa22.59■■□□□ 1.21
CIRBP-235ENST00000591935 C3orf67Q6ZVT6 689 aa22.59■■□□□ 1.21
CIRBP-235ENST00000591935 MBIPQ9NS73 344 aa22.59■■□□□ 1.21
CIRBP-235ENST00000591935 CHPF2Q9P2E5 772 aa22.59■■□□□ 1.21
CIRBP-235ENST00000591935 HOXB7P09629 217 aa22.58■■□□□ 1.21
CIRBP-235ENST00000591935 SMC1BQ8NDV3 1235 aa22.58■■□□□ 1.21
CIRBP-235ENST00000591935 FKBP4Q02790 459 aaKnown RBP eCLIP22.57■■□□□ 1.2
CIRBP-235ENST00000591935 CALD1Q05682 793 aaKnown RBP22.57■■□□□ 1.2
CIRBP-235ENST00000591935 HDGFL1Q5TGJ6 251 aa22.57■■□□□ 1.2
CIRBP-235ENST00000591935 DUSP27Q5VZP5 1158 aa22.57■■□□□ 1.2
CIRBP-235ENST00000591935 RPGRQ92834 1020 aaKnown RBP22.57■■□□□ 1.2
CIRBP-235ENST00000591935 WDR90Q96KV7 1748 aa22.57■■□□□ 1.2
CIRBP-235ENST00000591935 HOXA10P31260 410 aaPredicted RBP22.56■■□□□ 1.2
CIRBP-235ENST00000591935 HNRNPUQ00839 825 aaKnown RBP eCLIP22.56■■□□□ 1.2
CIRBP-235ENST00000591935 CC2D2BQ6DHV5 1058 aa22.56■■□□□ 1.2
CIRBP-235ENST00000591935 SLC51AQ86UW1 340 aa22.56■■□□□ 1.2
CIRBP-235ENST00000591935 UTP14AQ9BVJ6 771 aaKnown RBP22.56■■□□□ 1.2
CIRBP-235ENST00000591935 ZNF277Q9NRM2 450 aaPredicted RBP22.56■■□□□ 1.2
CIRBP-235ENST00000591935 RNF123Q5XPI4 1314 aa22.56■■□□□ 1.2
CIRBP-235ENST00000591935 DDNO94850 711 aaPredicted RBP22.55■■□□□ 1.2
CIRBP-235ENST00000591935 TCIRG1Q13488 830 aa22.55■■□□□ 1.2
CIRBP-235ENST00000591935 GRIPAP1Q4V328 841 aa22.55■■□□□ 1.2
CIRBP-235ENST00000591935 SLC10A5Q5PT55 438 aa22.55■■□□□ 1.2
CIRBP-235ENST00000591935 NLRP10Q86W26 655 aa22.55■■□□□ 1.2
CIRBP-235ENST00000591935 SYNE4Q8N205 404 aa22.55■■□□□ 1.2
CIRBP-235ENST00000591935 LAMB2P55268 1798 aa22.55■■□□□ 1.2
CIRBP-235ENST00000591935 ZNF428Q96B54 188 aa22.54■■□□□ 1.2
CIRBP-235ENST00000591935 RBM17Q96I25 401 aaKnown RBP22.54■■□□□ 1.2
CIRBP-235ENST00000591935 NLRP3Q96P20 1036 aa22.54■■□□□ 1.2
CIRBP-235ENST00000591935 SNED1Q8TER0 1413 aa22.54■■□□□ 1.2
CIRBP-235ENST00000591935 ELL2O00472 640 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-235ENST00000591935 CRAMP1Q96RY5 1269 aa22.53■■□□□ 1.2
CIRBP-235ENST00000591935 IFT57Q9NWB7 429 aa22.53■■□□□ 1.2
CIRBP-235ENST00000591935 DBF4Q9UBU7 674 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-235ENST00000591935 GNAI1P63096 354 aa22.52■■□□□ 1.2
CIRBP-235ENST00000591935 TCERG1O14776 1098 aaKnown RBP22.51■■□□□ 1.19
CIRBP-235ENST00000591935 HTRA3P83110 453 aa22.51■■□□□ 1.19
CIRBP-235ENST00000591935 FAM9BQ8IZU0 186 aa22.51■■□□□ 1.19
CIRBP-235ENST00000591935 DNAJC5GQ8N7S2 189 aa22.51■■□□□ 1.19
CIRBP-235ENST00000591935 PLBD2Q8NHP8 589 aa22.51■■□□□ 1.19
CIRBP-235ENST00000591935 PSMD1Q99460 953 aa22.51■■□□□ 1.19
CIRBP-235ENST00000591935 TAF1P21675 1872 aa22.51■■□□□ 1.19
CIRBP-235ENST00000591935 HCLS1P14317 486 aaPredicted RBP22.5■■□□□ 1.19
CIRBP-235ENST00000591935 IARSP41252 1262 aaKnown RBP22.5■■□□□ 1.19
CIRBP-235ENST00000591935 ANKRD13DQ6ZTN6 518 aa22.5■■□□□ 1.19
CIRBP-235ENST00000591935 C8orf58Q8NAV2 365 aa22.5■■□□□ 1.19
CIRBP-235ENST00000591935 TMX4Q9H1E5 349 aaPredicted RBP22.5■■□□□ 1.19
CIRBP-235ENST00000591935 IQCA1LA6NCM1 817 aa22.49■■□□□ 1.19
CIRBP-235ENST00000591935 CHMP4AQ9BY43 222 aa22.49■■□□□ 1.19
CIRBP-235ENST00000591935 HYPKQ9NX55 129 aa22.49■■□□□ 1.19
CIRBP-235ENST00000591935 TRMT112Q9UI30 125 aaKnown RBP22.49■■□□□ 1.19
CIRBP-235ENST00000591935 ZBED9Q6R2W3 1325 aa22.49■■□□□ 1.19
CIRBP-235ENST00000591935 ISCA1Q9BUE6 129 aa22.48■■□□□ 1.19
CIRBP-235ENST00000591935 ZNF541Q9H0D2 1346 aa22.48■■□□□ 1.19
CIRBP-235ENST00000591935 ATP5J2-PTCD1G3V325 749 aa22.47■■□□□ 1.19
CIRBP-235ENST00000591935 PPEF1O14829 653 aaPredicted RBP22.47■■□□□ 1.19
CIRBP-235ENST00000591935 JDP2Q8WYK2 163 aa22.47■■□□□ 1.19
CIRBP-235ENST00000591935 PHAXQ9H814 394 aaKnown RBP22.47■■□□□ 1.19
CIRBP-235ENST00000591935 COL4A5P29400 1685 aa22.46■■□□□ 1.19
CIRBP-235ENST00000591935 DDX60Q8IY21 1712 aaKnown RBP22.46■■□□□ 1.19
CIRBP-235ENST00000591935 L3MBTL3Q96JM7 780 aaPredicted RBP22.46■■□□□ 1.19
CIRBP-235ENST00000591935 SH3TC1Q8TE82 1336 aa22.46■■□□□ 1.19
CIRBP-235ENST00000591935 POTEIP0CG38 1075 aa22.45■■□□□ 1.18
CIRBP-235ENST00000591935 POTEJP0CG39 1038 aa22.45■■□□□ 1.18
CIRBP-235ENST00000591935 IFFO2Q5TF58 517 aa22.45■■□□□ 1.18
CIRBP-235ENST00000591935 TSPYL6Q8N831 410 aa22.45■■□□□ 1.18
CIRBP-235ENST00000591935 ABCC4O15439 1325 aa22.45■■□□□ 1.18
CIRBP-235ENST00000591935 SCN4AP35499 1836 aa22.45■■□□□ 1.18
CIRBP-235ENST00000591935 FZD9O00144 591 aa22.44■■□□□ 1.18
CIRBP-235ENST00000591935 FAM89AQ96GI7 184 aa22.44■■□□□ 1.18
CIRBP-235ENST00000591935 BBOX1O75936 387 aa22.43■■□□□ 1.18
CIRBP-235ENST00000591935 WWC1Q8IX03 1113 aa22.43■■□□□ 1.18
CIRBP-235ENST00000591935 TSR2Q969E8 191 aaKnown RBP22.43■■□□□ 1.18
CIRBP-235ENST00000591935 ATP6V0A2Q9Y487 856 aa22.43■■□□□ 1.18
CIRBP-235ENST00000591935 CCDC27Q2M243 656 aa22.42■■□□□ 1.18
CIRBP-235ENST00000591935 RTL5Q5HYW3 569 aaPredicted RBP22.42■■□□□ 1.18
CIRBP-235ENST00000591935 CHADLQ6NUI6 762 aa22.42■■□□□ 1.18
CIRBP-235ENST00000591935 RIC3Q7Z5B4 369 aa22.42■■□□□ 1.18
CIRBP-235ENST00000591935 KLRG1Q96E93 195 aa22.42■■□□□ 1.18
CIRBP-235ENST00000591935 VPS33BQ9H267 617 aa22.42■■□□□ 1.18
CIRBP-235ENST00000591935 EIF6P56537 245 aaKnown RBP22.41■■□□□ 1.18
CIRBP-235ENST00000591935 DDX46Q7L014 1031 aaKnown RBP22.41■■□□□ 1.18
CIRBP-235ENST00000591935 TAF1DQ9H5J8 278 aaPredicted RBP22.41■■□□□ 1.18
CIRBP-235ENST00000591935 GOLGA2Q08379 1002 aa22.4■■□□□ 1.18
CIRBP-235ENST00000591935 TRIM28Q13263 835 aaKnown RBP22.4■■□□□ 1.18
CIRBP-235ENST00000591935 GPC2Q8N158 579 aa22.4■■□□□ 1.18
CIRBP-235ENST00000591935 SUPT20HQ8NEM7 779 aa22.4■■□□□ 1.18
CIRBP-235ENST00000591935 TMC4Q7Z404 712 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms