RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 NECTIN2Q92692 538 aa21.17■□□□□ 0.98
GCDH-213ENST00000590627 CNKSR1Q969H4 720 aa21.17■□□□□ 0.98
GCDH-213ENST00000590627 KLRG1Q96E93 195 aa21.17■□□□□ 0.98
GCDH-213ENST00000590627 BCL2L13Q9BXK5 485 aa21.17■□□□□ 0.98
GCDH-213ENST00000590627 DDX21Q9NR30 783 aaKnown RBP eCLIP21.17■□□□□ 0.98
GCDH-213ENST00000590627 CHPF2Q9P2E5 772 aa21.17■□□□□ 0.98
GCDH-213ENST00000590627 LTBP3Q9NS15 1303 aa21.17■□□□□ 0.98
GCDH-213ENST00000590627 ARFGEF2Q9Y6D5 1785 aa21.16■□□□□ 0.98
GCDH-213ENST00000590627 TCERG1O14776 1098 aaKnown RBP21.16■□□□□ 0.98
GCDH-213ENST00000590627 STYK1Q6J9G0 422 aa21.16■□□□□ 0.98
GCDH-213ENST00000590627 DPY19L2Q6NUT2 758 aa21.16■□□□□ 0.98
GCDH-213ENST00000590627 ZNF652Q9Y2D9 606 aa21.16■□□□□ 0.98
GCDH-213ENST00000590627 SRGNP10124 158 aa21.15■□□□□ 0.98
GCDH-213ENST00000590627 HYPKQ9NX55 129 aa21.15■□□□□ 0.98
GCDH-213ENST00000590627 SUPT16HQ9Y5B9 1047 aaKnown RBP21.15■□□□□ 0.98
GCDH-213ENST00000590627 KIF16BQ96L93 1317 aa21.14■□□□□ 0.97
GCDH-213ENST00000590627 PIP4K2AP48426 406 aaPredicted RBP21.14■□□□□ 0.97
GCDH-213ENST00000590627 SOGA3Q5TF21 947 aa21.14■□□□□ 0.97
GCDH-213ENST00000590627 LRP10Q7Z4F1 713 aa21.14■□□□□ 0.97
GCDH-213ENST00000590627 JMYQ8N9B5 988 aa21.14■□□□□ 0.97
GCDH-213ENST00000590627 ARHGAP45Q92619 1136 aa21.14■□□□□ 0.97
GCDH-213ENST00000590627 MASTLQ96GX5 879 aa21.14■□□□□ 0.97
GCDH-213ENST00000590627 SLX4Q8IY92 1834 aa21.13■□□□□ 0.97
GCDH-213ENST00000590627 NBPF26B4DH59 902 aa21.13■□□□□ 0.97
GCDH-213ENST00000590627 HTRA3P83110 453 aa21.13■□□□□ 0.97
GCDH-213ENST00000590627 PROSER3Q2NL68 480 aa21.13■□□□□ 0.97
GCDH-213ENST00000590627 ERFEQ4G0M1 354 aa21.13■□□□□ 0.97
GCDH-213ENST00000590627 NBPF10Q6P3W6 841 aaKnown RBP21.13■□□□□ 0.97
GCDH-213ENST00000590627 NBPF15Q8N660 670 aa21.13■□□□□ 0.97
GCDH-213ENST00000590627 TAOK3Q9H2K8 898 aa21.13■□□□□ 0.97
GCDH-213ENST00000590627 ZNF219Q9P2Y4 722 aaPredicted RBP21.13■□□□□ 0.97
GCDH-213ENST00000590627 CACNA1FO60840 1977 aa21.13■□□□□ 0.97
GCDH-213ENST00000590627 CACNA1SQ13698 1873 aa21.12■□□□□ 0.97
GCDH-213ENST00000590627 IPO8O15397 1037 aaKnown RBP21.12■□□□□ 0.97
GCDH-213ENST00000590627 RRP1P56182 461 aaKnown RBP21.12■□□□□ 0.97
GCDH-213ENST00000590627 PRPF40BQ6NWY9 871 aaKnown RBP21.12■□□□□ 0.97
GCDH-213ENST00000590627 NBPF5PQ86XG9 351 aaPredicted RBP21.12■□□□□ 0.97
GCDH-213ENST00000590627 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.12■□□□□ 0.97
GCDH-213ENST00000590627 NOB1Q9ULX3 412 aaKnown RBP21.12■□□□□ 0.97
GCDH-213ENST00000590627 PTPRCP08575 1304 aa21.11■□□□□ 0.97
GCDH-213ENST00000590627 G2E3Q7L622 706 aa21.11■□□□□ 0.97
GCDH-213ENST00000590627 POTECB2RU33 542 aa21.1■□□□□ 0.97
GCDH-213ENST00000590627 FLIIQ13045 1269 aa21.1■□□□□ 0.97
GCDH-213ENST00000590627 TPTE2Q6XPS3 522 aa21.1■□□□□ 0.97
GCDH-213ENST00000590627 KLRG2A4D1S0 409 aaPredicted RBP21.09■□□□□ 0.97
GCDH-213ENST00000590627 ANXA1P04083 346 aa21.09■□□□□ 0.97
GCDH-213ENST00000590627 ZKSCAN2Q63HK3 967 aa21.09■□□□□ 0.97
GCDH-213ENST00000590627 PHAXQ9H814 394 aaKnown RBP21.09■□□□□ 0.97
GCDH-213ENST00000590627 MYL6BP14649 208 aa21.08■□□□□ 0.97
GCDH-213ENST00000590627 NPR1P16066 1061 aa21.08■□□□□ 0.97
GCDH-213ENST00000590627 ATF7IPQ6VMQ6 1270 aa21.08■□□□□ 0.97
GCDH-213ENST00000590627 FRAT1Q92837 279 aaPredicted RBP21.08■□□□□ 0.97
GCDH-213ENST00000590627 NIP7Q9Y221 180 aaKnown RBP eCLIP21.08■□□□□ 0.97
GCDH-213ENST00000590627 C7orf43Q8WVR3 580 aa21.07■□□□□ 0.96
GCDH-213ENST00000590627 API5Q9BZZ5 524 aaKnown RBP21.07■□□□□ 0.96
GCDH-213ENST00000590627 PLIN1O60240 522 aa21.06■□□□□ 0.96
GCDH-213ENST00000590627 TRIM27P14373 513 aa21.06■□□□□ 0.96
GCDH-213ENST00000590627 PDE3AQ14432 1141 aa21.06■□□□□ 0.96
GCDH-213ENST00000590627 CCDC93Q567U6 631 aa21.06■□□□□ 0.96
GCDH-213ENST00000590627 PCNTO95613 3336 aa21.06■□□□□ 0.96
GCDH-213ENST00000590627 MS4A1P11836 297 aa21.05■□□□□ 0.96
GCDH-213ENST00000590627 COPS6Q7L5N1 327 aa21.05■□□□□ 0.96
GCDH-213ENST00000590627 XAGE3Q8WTP9 111 aa21.05■□□□□ 0.96
GCDH-213ENST00000590627 FKBP5Q13451 457 aaPredicted RBP21.04■□□□□ 0.96
GCDH-213ENST00000590627 DDNO94850 711 aaPredicted RBP21.03■□□□□ 0.96
GCDH-213ENST00000590627 DDX58O95786 925 aaKnown RBP21.03■□□□□ 0.96
GCDH-213ENST00000590627 HLFQ16534 295 aa21.03■□□□□ 0.96
GCDH-213ENST00000590627 KSR2Q6VAB6 950 aa21.03■□□□□ 0.96
GCDH-213ENST00000590627 ERVV-1B6SEH8 477 aa21.02■□□□□ 0.96
GCDH-213ENST00000590627 ALDH1B1P30837 517 aa21.02■□□□□ 0.96
GCDH-213ENST00000590627 FKBP4Q02790 459 aaKnown RBP eCLIP21.02■□□□□ 0.96
GCDH-213ENST00000590627 ABCC4O15439 1325 aa21.02■□□□□ 0.95
GCDH-213ENST00000590627 IQCA1LA6NCM1 817 aa21.01■□□□□ 0.95
GCDH-213ENST00000590627 AIMP1Q12904 312 aaKnown RBP21.01■□□□□ 0.95
GCDH-213ENST00000590627 ANKRD13DQ6ZTN6 518 aa21.01■□□□□ 0.95
GCDH-213ENST00000590627 DZIP1LQ8IYY4 767 aaKnown RBP21.01■□□□□ 0.95
GCDH-213ENST00000590627 RTKN2Q8IZC4 609 aa21.01■□□□□ 0.95
GCDH-213ENST00000590627 PLBD2Q8NHP8 589 aa21.01■□□□□ 0.95
GCDH-213ENST00000590627 NYXQ9GZU5 481 aa21.01■□□□□ 0.95
GCDH-213ENST00000590627 NUP98P52948 1817 aa21.01■□□□□ 0.95
GCDH-213ENST00000590627 SCN4AP35499 1836 aa21■□□□□ 0.95
GCDH-213ENST00000590627 PI4KAP2A4QPH2 592 aa21■□□□□ 0.95
GCDH-213ENST00000590627 FAM177BA6PVY3 158 aa21■□□□□ 0.95
GCDH-213ENST00000590627 GTF2E1P29083 439 aaPredicted RBP21■□□□□ 0.95
GCDH-213ENST00000590627 CHADLQ6NUI6 762 aa21■□□□□ 0.95
GCDH-213ENST00000590627 TTLL7Q6ZT98 887 aa21■□□□□ 0.95
GCDH-213ENST00000590627 PI4KAP1Q8N8J0 262 aa21■□□□□ 0.95
GCDH-213ENST00000590627 L3MBTL3Q96JM7 780 aaPredicted RBP21■□□□□ 0.95
GCDH-213ENST00000590627 TNNQ9UQP3 1299 aa21■□□□□ 0.95
GCDH-213ENST00000590627 MAP3K15Q6ZN16 1313 aa21■□□□□ 0.95
GCDH-213ENST00000590627 RLBP1P12271 317 aa20.99■□□□□ 0.95
GCDH-213ENST00000590627 C20orf194Q5TEA3 1177 aa20.99■□□□□ 0.95
GCDH-213ENST00000590627 FTSJ3Q8IY81 847 aaKnown RBP20.99■□□□□ 0.95
GCDH-213ENST00000590627 DNAAF4Q8WXU2 420 aa20.99■□□□□ 0.95
GCDH-213ENST00000590627 IBTKQ9P2D0 1353 aaPredicted RBP20.98■□□□□ 0.95
GCDH-213ENST00000590627 RIC1Q4ADV7 1423 aa20.98■□□□□ 0.95
GCDH-213ENST00000590627 CRY2Q49AN0 593 aa20.98■□□□□ 0.95
GCDH-213ENST00000590627 INTS3Q68E01 1043 aaKnown RBP20.98■□□□□ 0.95
GCDH-213ENST00000590627 KIF6Q6ZMV9 814 aa20.98■□□□□ 0.95
GCDH-213ENST00000590627 CLUAP1Q96AJ1 413 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms