RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 ARHGAP45Q92619 1136 aa24.31■■□□□ 1.48
DDX39A-214ENST00000590556 FHDC1Q9C0D6 1143 aaPredicted RBP24.31■■□□□ 1.48
DDX39A-214ENST00000590556 CWC25Q9NXE8 425 aaPredicted RBP24.31■■□□□ 1.48
DDX39A-214ENST00000590556 TRMT112Q9UI30 125 aaKnown RBP24.31■■□□□ 1.48
DDX39A-214ENST00000590556 C10orf71Q711Q0 1435 aa24.3■■□□□ 1.48
DDX39A-214ENST00000590556 CWF19L2Q2TBE0 894 aaKnown RBP24.3■■□□□ 1.48
DDX39A-214ENST00000590556 NUTM1Q86Y26 1132 aa24.3■■□□□ 1.48
DDX39A-214ENST00000590556 NEURL1BA8MQ27 555 aa24.29■■□□□ 1.48
DDX39A-214ENST00000590556 ERFEQ4G0M1 354 aa24.29■■□□□ 1.48
DDX39A-214ENST00000590556 BEND3Q5T5X7 828 aa24.29■■□□□ 1.48
DDX39A-214ENST00000590556 RNF123Q5XPI4 1314 aa24.28■■□□□ 1.48
DDX39A-214ENST00000590556 KIF13BQ9NQT8 1826 aa24.27■■□□□ 1.48
DDX39A-214ENST00000590556 ZKSCAN2Q63HK3 967 aa24.27■■□□□ 1.48
DDX39A-214ENST00000590556 BRIP1Q9BX63 1249 aa24.27■■□□□ 1.48
DDX39A-214ENST00000590556 SRCIN1Q9C0H9 1055 aa24.27■■□□□ 1.48
DDX39A-214ENST00000590556 SH3TC1Q8TE82 1336 aa24.27■■□□□ 1.48
DDX39A-214ENST00000590556 ATF7IPQ6VMQ6 1270 aa24.26■■□□□ 1.47
DDX39A-214ENST00000590556 SYT17Q9BSW7 474 aa24.26■■□□□ 1.47
DDX39A-214ENST00000590556 ALDH1L1O75891 902 aa24.25■■□□□ 1.47
DDX39A-214ENST00000590556 PDE6BP35913 854 aa24.25■■□□□ 1.47
DDX39A-214ENST00000590556 GCKRQ14397 625 aa24.25■■□□□ 1.47
DDX39A-214ENST00000590556 ZBTB38Q8NAP3 1195 aaPredicted RBP24.25■■□□□ 1.47
DDX39A-214ENST00000590556 FAM89AQ96GI7 184 aa24.25■■□□□ 1.47
DDX39A-214ENST00000590556 SRCAPQ6ZRS2 3230 aa24.25■■□□□ 1.47
DDX39A-214ENST00000590556 PCCAP05165 728 aaPredicted RBP24.24■■□□□ 1.47
DDX39A-214ENST00000590556 TRIM27P14373 513 aa24.24■■□□□ 1.47
DDX39A-214ENST00000590556 TGFB2P61812 414 aa24.24■■□□□ 1.47
DDX39A-214ENST00000590556 RTL5Q5HYW3 569 aaPredicted RBP24.24■■□□□ 1.47
DDX39A-214ENST00000590556 SYNE4Q8N205 404 aa24.24■■□□□ 1.47
DDX39A-214ENST00000590556 ABCC12Q96J65 1359 aa24.24■■□□□ 1.47
DDX39A-214ENST00000590556 PXDNLA1KZ92 1463 aa24.24■■□□□ 1.47
DDX39A-214ENST00000590556 ANKRD31Q8N7Z5 1873 aa24.24■■□□□ 1.47
DDX39A-214ENST00000590556 SLC10A5Q5PT55 438 aa24.23■■□□□ 1.47
DDX39A-214ENST00000590556 NLGN2Q8NFZ4 835 aa24.23■■□□□ 1.47
DDX39A-214ENST00000590556 CCT4P50991 539 aaKnown RBP24.22■■□□□ 1.47
DDX39A-214ENST00000590556 JARID2Q92833 1246 aaPredicted RBP24.22■■□□□ 1.47
DDX39A-214ENST00000590556 ABCC4O15439 1325 aa24.21■■□□□ 1.47
DDX39A-214ENST00000590556 A0A0G2JLW4 131 aa24.21■■□□□ 1.47
DDX39A-214ENST00000590556 HCLS1P14317 486 aaPredicted RBP24.21■■□□□ 1.47
DDX39A-214ENST00000590556 C2CD5Q86YS7 1000 aa24.21■■□□□ 1.47
DDX39A-214ENST00000590556 CLUAP1Q96AJ1 413 aa24.21■■□□□ 1.47
DDX39A-214ENST00000590556 TNNQ9UQP3 1299 aa24.21■■□□□ 1.47
DDX39A-214ENST00000590556 RIC1Q4ADV7 1423 aa24.2■■□□□ 1.46
DDX39A-214ENST00000590556 H0YIN7 160 aa24.2■■□□□ 1.46
DDX39A-214ENST00000590556 H7C1W4 665 aa24.2■■□□□ 1.46
DDX39A-214ENST00000590556 IRS4O14654 1257 aaPredicted RBP24.2■■□□□ 1.46
DDX39A-214ENST00000590556 DPEP1P16444 411 aa24.2■■□□□ 1.46
DDX39A-214ENST00000590556 UBE3BQ7Z3V4 1068 aa24.2■■□□□ 1.46
DDX39A-214ENST00000590556 C9orf78Q9NZ63 289 aaPredicted RBP24.2■■□□□ 1.46
DDX39A-214ENST00000590556 PDZRN3Q9UPQ7 1066 aa24.2■■□□□ 1.46
DDX39A-214ENST00000590556 HSP90B1P14625 803 aaKnown RBP24.19■■□□□ 1.46
DDX39A-214ENST00000590556 CHRNA5P30532 468 aa24.19■■□□□ 1.46
DDX39A-214ENST00000590556 NLRP3Q96P20 1036 aa24.19■■□□□ 1.46
DDX39A-214ENST00000590556 N4BP2Q86UW6 1770 aaPredicted RBP24.19■■□□□ 1.46
DDX39A-214ENST00000590556 CDHR2Q9BYE9 1310 aa24.18■■□□□ 1.46
DDX39A-214ENST00000590556 KLRG2A4D1S0 409 aaPredicted RBP24.18■■□□□ 1.46
DDX39A-214ENST00000590556 GRM8O00222 908 aa24.18■■□□□ 1.46
DDX39A-214ENST00000590556 FTSJ3Q8IY81 847 aaKnown RBP24.18■■□□□ 1.46
DDX39A-214ENST00000590556 DZIP1LQ8IYY4 767 aaKnown RBP24.18■■□□□ 1.46
DDX39A-214ENST00000590556 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.18■■□□□ 1.46
DDX39A-214ENST00000590556 INTS3Q68E01 1043 aaKnown RBP24.17■■□□□ 1.46
DDX39A-214ENST00000590556 KIAA1551Q9HCM1 1747 aa24.17■■□□□ 1.46
DDX39A-214ENST00000590556 TNRC6CQ9HCJ0 1690 aaKnown RBP24.17■■□□□ 1.46
DDX39A-214ENST00000590556 PLIN1O60240 522 aa24.16■■□□□ 1.46
DDX39A-214ENST00000590556 MS4A1P11836 297 aa24.16■■□□□ 1.46
DDX39A-214ENST00000590556 C3orf67Q6ZVT6 689 aa24.16■■□□□ 1.46
DDX39A-214ENST00000590556 DDX60Q8IY21 1712 aaKnown RBP24.15■■□□□ 1.46
DDX39A-214ENST00000590556 SRGNP10124 158 aa24.15■■□□□ 1.46
DDX39A-214ENST00000590556 KCNA3P22001 575 aa24.15■■□□□ 1.46
DDX39A-214ENST00000590556 CASP7P55210 303 aa24.15■■□□□ 1.46
DDX39A-214ENST00000590556 ZNF622Q969S3 477 aaKnown RBP eCLIP24.15■■□□□ 1.463e-11■□□□□ 10
DDX39A-214ENST00000590556 LAMB2P55268 1798 aa24.14■■□□□ 1.46
DDX39A-214ENST00000590556 PDE8AO60658 829 aa24.14■■□□□ 1.45
DDX39A-214ENST00000590556 NPR1P16066 1061 aa24.14■■□□□ 1.45
DDX39A-214ENST00000590556 CRY2Q49AN0 593 aa24.14■■□□□ 1.45
DDX39A-214ENST00000590556 TMEM57Q8N5G2 664 aa24.14■■□□□ 1.45
DDX39A-214ENST00000590556 RPGRQ92834 1020 aaKnown RBP24.14■■□□□ 1.45
DDX39A-214ENST00000590556 MASTLQ96GX5 879 aa24.14■■□□□ 1.45
DDX39A-214ENST00000590556 COL11A2P13942 1736 aaPredicted RBP24.13■■□□□ 1.45
DDX39A-214ENST00000590556 STYK1Q6J9G0 422 aa24.13■■□□□ 1.45
DDX39A-214ENST00000590556 USP44Q9H0E7 712 aa24.13■■□□□ 1.45
DDX39A-214ENST00000590556 PIM2Q9P1W9 311 aa24.13■■□□□ 1.45
DDX39A-214ENST00000590556 UTYO14607 1347 aa24.12■■□□□ 1.45
DDX39A-214ENST00000590556 NBPF7P0C2Y1 421 aaPredicted RBP24.12■■□□□ 1.45
DDX39A-214ENST00000590556 RLBP1P12271 317 aa24.12■■□□□ 1.45
DDX39A-214ENST00000590556 PANK1Q8TE04 598 aa24.12■■□□□ 1.45
DDX39A-214ENST00000590556 DLEC1Q9Y238 1755 aa24.11■■□□□ 1.45
DDX39A-214ENST00000590556 SF3B3Q15393 1217 aaKnown RBP24.11■■□□□ 1.45
DDX39A-214ENST00000590556 PLA2G12BQ9BX93 195 aa24.11■■□□□ 1.45
DDX39A-214ENST00000590556 WWC3Q9ULE0 1092 aa24.11■■□□□ 1.45
DDX39A-214ENST00000590556 HOXA10P31260 410 aaPredicted RBP24.1■■□□□ 1.45
DDX39A-214ENST00000590556 CNKSR1Q969H4 720 aa24.1■■□□□ 1.45
DDX39A-214ENST00000590556 RBM17Q96I25 401 aaKnown RBP24.1■■□□□ 1.45
DDX39A-214ENST00000590556 CTSWP56202 376 aa24.09■■□□□ 1.45
DDX39A-214ENST00000590556 CCDC152Q4G0S7 254 aa24.09■■□□□ 1.45
DDX39A-214ENST00000590556 DALRD3Q5D0E6 543 aaKnown RBP24.09■■□□□ 1.45
DDX39A-214ENST00000590556 ITPRIPQ8IWB1 547 aa24.09■■□□□ 1.45
DDX39A-214ENST00000590556 TTLL6Q8N841 843 aa24.09■■□□□ 1.45
DDX39A-214ENST00000590556 MYH3P11055 1940 aa24.09■■□□□ 1.45
DDX39A-214ENST00000590556 BRCA1P38398 1863 aaKnown RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms