RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 ZKSCAN2Q63HK3 967 aa16.31■□□□□ 0.2
DDX39A-213ENST00000590315 NLRP10Q86W26 655 aa16.31■□□□□ 0.2
DDX39A-213ENST00000590315 NUTM1Q86Y26 1132 aa16.31■□□□□ 0.2
DDX39A-213ENST00000590315 UTP14AQ9BVJ6 771 aaKnown RBP16.31■□□□□ 0.2
DDX39A-213ENST00000590315 CWC25Q9NXE8 425 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-213ENST00000590315 TRMT112Q9UI30 125 aaKnown RBP16.31■□□□□ 0.2
DDX39A-213ENST00000590315 TPTE2Q6XPS3 522 aa16.3■□□□□ 0.2
DDX39A-213ENST00000590315 FTSJ3Q8IY81 847 aaKnown RBP16.3■□□□□ 0.2
DDX39A-213ENST00000590315 CLUAP1Q96AJ1 413 aa16.3■□□□□ 0.2
DDX39A-213ENST00000590315 SGIP1Q9BQI5 828 aa16.3■□□□□ 0.2
DDX39A-213ENST00000590315 ISCA1Q9BUE6 129 aa16.3■□□□□ 0.2
DDX39A-213ENST00000590315 KIAA1551Q9HCM1 1747 aa16.29■□□□□ 0.2
DDX39A-213ENST00000590315 PRR5LQ6MZQ0 368 aa16.29■□□□□ 0.2
DDX39A-213ENST00000590315 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-213ENST00000590315 SRCIN1Q9C0H9 1055 aa16.29■□□□□ 0.2
DDX39A-213ENST00000590315 C10orf71Q711Q0 1435 aa16.28■□□□□ 0.2
DDX39A-213ENST00000590315 IBTKQ9P2D0 1353 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-213ENST00000590315 NEURL1BA8MQ27 555 aa16.28■□□□□ 0.2
DDX39A-213ENST00000590315 NTSR2O95665 410 aa16.28■□□□□ 0.2
DDX39A-213ENST00000590315 BRPF1P55201 1214 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-213ENST00000590315 ERFEQ4G0M1 354 aa16.28■□□□□ 0.2
DDX39A-213ENST00000590315 ATF7IPQ6VMQ6 1270 aa16.28■□□□□ 0.2
DDX39A-213ENST00000590315 CCDC191Q8NCU4 936 aa16.28■□□□□ 0.2
DDX39A-213ENST00000590315 LINS1Q8NG48 757 aa16.28■□□□□ 0.2
DDX39A-213ENST00000590315 BRCA1P38398 1863 aaKnown RBP16.28■□□□□ 0.2
DDX39A-213ENST00000590315 ABCC12Q96J65 1359 aa16.27■□□□□ 0.2
DDX39A-213ENST00000590315 TAF1P21675 1872 aa16.27■□□□□ 0.2
DDX39A-213ENST00000590315 IGKV5-2P06315 115 aa16.27■□□□□ 0.2
DDX39A-213ENST00000590315 JARID2Q92833 1246 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-213ENST00000590315 FHDC1Q9C0D6 1143 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-213ENST00000590315 TNNQ9UQP3 1299 aa16.27■□□□□ 0.2
DDX39A-213ENST00000590315 SH3TC1Q8TE82 1336 aa16.26■□□□□ 0.19
DDX39A-213ENST00000590315 PLIN1O60240 522 aa16.26■□□□□ 0.19
DDX39A-213ENST00000590315 TRIM27P14373 513 aa16.26■□□□□ 0.19
DDX39A-213ENST00000590315 BEND3Q5T5X7 828 aa16.26■□□□□ 0.19
DDX39A-213ENST00000590315 ARHGAP45Q92619 1136 aa16.26■□□□□ 0.19
DDX39A-213ENST00000590315 FAM89AQ96GI7 184 aa16.26■□□□□ 0.19
DDX39A-213ENST00000590315 C9orf78Q9NZ63 289 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-213ENST00000590315 CCT4P50991 539 aaKnown RBP16.25■□□□□ 0.19
DDX39A-213ENST00000590315 UBE3BQ7Z3V4 1068 aa16.25■□□□□ 0.19
DDX39A-213ENST00000590315 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
DDX39A-213ENST00000590315 ALDH1L1O75891 902 aa16.24■□□□□ 0.19
DDX39A-213ENST00000590315 TRIM28Q13263 835 aaKnown RBP16.24■□□□□ 0.19
DDX39A-213ENST00000590315 GCKRQ14397 625 aa16.24■□□□□ 0.19
DDX39A-213ENST00000590315 DZIP1LQ8IYY4 767 aaKnown RBP16.24■□□□□ 0.19
DDX39A-213ENST00000590315 SYNE4Q8N205 404 aa16.24■□□□□ 0.19
DDX39A-213ENST00000590315 WWC3Q9ULE0 1092 aa16.24■□□□□ 0.19
DDX39A-213ENST00000590315 ABCC4O15439 1325 aa16.23■□□□□ 0.19
DDX39A-213ENST00000590315 IRS4O14654 1257 aaPredicted RBP16.23■□□□□ 0.19
DDX39A-213ENST00000590315 PCCAP05165 728 aaPredicted RBP16.23■□□□□ 0.19
DDX39A-213ENST00000590315 MS4A1P11836 297 aa16.23■□□□□ 0.19
DDX39A-213ENST00000590315 HCLS1P14317 486 aaPredicted RBP16.23■□□□□ 0.19
DDX39A-213ENST00000590315 PDE6BP35913 854 aa16.23■□□□□ 0.19
DDX39A-213ENST00000590315 C2CD5Q86YS7 1000 aa16.23■□□□□ 0.19
DDX39A-213ENST00000590315 ITPRIPQ8IWB1 547 aa16.23■□□□□ 0.19
DDX39A-213ENST00000590315 ZBTB38Q8NAP3 1195 aaPredicted RBP16.23■□□□□ 0.19
DDX39A-213ENST00000590315 CD2APQ9Y5K6 639 aa16.23■□□□□ 0.19
DDX39A-213ENST00000590315 PELP1Q8IZL8 1130 aaKnown RBP16.22■□□□□ 0.19
DDX39A-213ENST00000590315 NLGN2Q8NFZ4 835 aa16.22■□□□□ 0.19
DDX39A-213ENST00000590315 BRIP1Q9BX63 1249 aa16.22■□□□□ 0.19
DDX39A-213ENST00000590315 ARFGEF1Q9Y6D6 1849 aa16.22■□□□□ 0.19
DDX39A-213ENST00000590315 H0YIN7 160 aa16.21■□□□□ 0.19
DDX39A-213ENST00000590315 GRM8O00222 908 aa16.21■□□□□ 0.19
DDX39A-213ENST00000590315 HSP90B1P14625 803 aaKnown RBP16.21■□□□□ 0.19
DDX39A-213ENST00000590315 CHRNA5P30532 468 aa16.21■□□□□ 0.19
DDX39A-213ENST00000590315 TMEM57Q8N5G2 664 aa16.21■□□□□ 0.19
DDX39A-213ENST00000590315 PANK1Q8TE04 598 aa16.21■□□□□ 0.19
DDX39A-213ENST00000590315 RPGRQ92834 1020 aaKnown RBP16.21■□□□□ 0.19
DDX39A-213ENST00000590315 ZNF622Q969S3 477 aaKnown RBP eCLIP16.21■□□□□ 0.197e-12■□□□□ 10.5
DDX39A-213ENST00000590315 NLRP3Q96P20 1036 aa16.21■□□□□ 0.19
DDX39A-213ENST00000590315 RIC1Q4ADV7 1423 aa16.2■□□□□ 0.18
DDX39A-213ENST00000590315 A0A0G2JLW4 131 aa16.2■□□□□ 0.18
DDX39A-213ENST00000590315 DPEP1P16444 411 aa16.2■□□□□ 0.18
DDX39A-213ENST00000590315 RRP1P56182 461 aaKnown RBP16.2■□□□□ 0.18
DDX39A-213ENST00000590315 CCDC85AQ96PX6 553 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-213ENST00000590315 SYT17Q9BSW7 474 aa16.2■□□□□ 0.18
DDX39A-213ENST00000590315 CHMP3Q9Y3E7 222 aa16.2■□□□□ 0.18
DDX39A-213ENST00000590315 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
DDX39A-213ENST00000590315 SLX4Q8IY92 1834 aa16.19■□□□□ 0.18
DDX39A-213ENST00000590315 PDE8AO60658 829 aa16.19■□□□□ 0.18
DDX39A-213ENST00000590315 CENPBP07199 599 aaPredicted RBP16.19■□□□□ 0.18
DDX39A-213ENST00000590315 H7C1W4 665 aa16.18■□□□□ 0.18
DDX39A-213ENST00000590315 UBTFL1P0CB47 393 aaPredicted RBP16.18■□□□□ 0.18
DDX39A-213ENST00000590315 RLBP1P12271 317 aa16.18■□□□□ 0.18
DDX39A-213ENST00000590315 TGFB2P61812 414 aa16.18■□□□□ 0.18
DDX39A-213ENST00000590315 INTS3Q68E01 1043 aaKnown RBP16.18■□□□□ 0.18
DDX39A-213ENST00000590315 PDZRN3Q9UPQ7 1066 aa16.18■□□□□ 0.18
DDX39A-213ENST00000590315 NBPF7P0C2Y1 421 aaPredicted RBP16.17■□□□□ 0.18
DDX39A-213ENST00000590315 C3orf67Q6ZVT6 689 aa16.17■□□□□ 0.18
DDX39A-213ENST00000590315 COG6Q9Y2V7 657 aa16.17■□□□□ 0.18
DDX39A-213ENST00000590315 SUPT16HQ9Y5B9 1047 aaKnown RBP16.17■□□□□ 0.18
DDX39A-213ENST00000590315 CCDC88AQ3V6T2 1871 aa16.16■□□□□ 0.18
DDX39A-213ENST00000590315 CTSWP56202 376 aa16.16■□□□□ 0.18
DDX39A-213ENST00000590315 SLC10A5Q5PT55 438 aa16.16■□□□□ 0.18
DDX39A-213ENST00000590315 MASTLQ96GX5 879 aa16.16■□□□□ 0.18
DDX39A-213ENST00000590315 RBM17Q96I25 401 aaKnown RBP16.16■□□□□ 0.18
DDX39A-213ENST00000590315 MEIS3Q99687 375 aa16.16■□□□□ 0.18
DDX39A-213ENST00000590315 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
DDX39A-213ENST00000590315 GNAI3P08754 354 aa16.15■□□□□ 0.18
DDX39A-213ENST00000590315 NPR1P16066 1061 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms