RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SRGAP3O43295 1099 aa10.83□□□□□ -0.68
SMAD4-206ENST00000588860 EN1Q05925 392 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-206ENST00000588860 ANKRD13DQ6ZTN6 518 aa10.83□□□□□ -0.68
SMAD4-206ENST00000588860 LRP10Q7Z4F1 713 aa10.83□□□□□ -0.68
SMAD4-206ENST00000588860 PIGBQ92521 554 aa10.83□□□□□ -0.68
SMAD4-206ENST00000588860 METTL22Q9BUU2 404 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-206ENST00000588860 SCUBE2Q9NQ36 999 aa10.83□□□□□ -0.68
SMAD4-206ENST00000588860 NUP98P52948 1817 aa10.83□□□□□ -0.68
SMAD4-206ENST00000588860 NEURL1BA8MQ27 555 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 NBPF26B4DH59 902 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 CDC45O75419 566 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 SURF6O75683 361 aaKnown RBP10.82□□□□□ -0.68
SMAD4-206ENST00000588860 A1BGP04217 495 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 IGKV5-2P06315 115 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 GSPT1P15170 499 aaKnown RBP10.82□□□□□ -0.68
SMAD4-206ENST00000588860 ATN1P54259 1190 aaPredicted RBP10.82□□□□□ -0.68
SMAD4-206ENST00000588860 NBPF14Q5TI25 921 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 NBPF10Q6P3W6 841 aaKnown RBP10.82□□□□□ -0.68
SMAD4-206ENST00000588860 UNC5CLQ8IV45 518 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 NBPF15Q8N660 670 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 TBC1D32Q96NH3 1257 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 ASAP1Q9ULH1 1129 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 THRAP3Q9Y2W1 955 aaKnown RBP10.82□□□□□ -0.68
SMAD4-206ENST00000588860 CCDC9Q9Y3X0 531 aaKnown RBP10.82□□□□□ -0.68
SMAD4-206ENST00000588860 BCL9O00512 1426 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 MYH3P11055 1940 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 UTYO14607 1347 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 SPATA31A5Q5VU36 1347 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 SPATA31A7Q8IWB4 1347 aa10.82□□□□□ -0.68
SMAD4-206ENST00000588860 RAB11FIP3O75154 756 aa10.81□□□□□ -0.68
SMAD4-206ENST00000588860 GCKRQ14397 625 aa10.81□□□□□ -0.68
SMAD4-206ENST00000588860 KRT27Q7Z3Y8 459 aa10.81□□□□□ -0.68
SMAD4-206ENST00000588860 PLBD2Q8NHP8 589 aa10.81□□□□□ -0.68
SMAD4-206ENST00000588860 KIF12Q96FN5 646 aa10.81□□□□□ -0.68
SMAD4-206ENST00000588860 SUCLG2Q96I99 432 aa10.81□□□□□ -0.68
SMAD4-206ENST00000588860 ATG3Q9NT62 314 aa10.81□□□□□ -0.68
SMAD4-206ENST00000588860 DAXXQ9UER7 740 aaPredicted RBP10.81□□□□□ -0.68
SMAD4-206ENST00000588860 OS9Q13438 667 aaPredicted RBP10.8□□□□□ -0.68
SMAD4-206ENST00000588860 MTX1Q13505 466 aa10.8□□□□□ -0.68
SMAD4-206ENST00000588860 DDB1Q16531 1140 aa10.8□□□□□ -0.68
SMAD4-206ENST00000588860 HSP90AB4PQ58FF6 505 aa10.8□□□□□ -0.68
SMAD4-206ENST00000588860 TBC1D9Q6ZT07 1266 aa10.8□□□□□ -0.68
SMAD4-206ENST00000588860 C22orf23Q9BZE7 217 aa10.8□□□□□ -0.68
SMAD4-206ENST00000588860 RREB1Q92766 1687 aa10.79□□□□□ -0.68
SMAD4-206ENST00000588860 A0A0G2JS52 829 aa10.79□□□□□ -0.68
SMAD4-206ENST00000588860 MX1P20591 662 aa10.79□□□□□ -0.68
SMAD4-206ENST00000588860 PDE1AP54750 535 aa10.79□□□□□ -0.68
SMAD4-206ENST00000588860 TTLL7Q6ZT98 887 aa10.79□□□□□ -0.68
SMAD4-206ENST00000588860 DNAJC10Q8IXB1 793 aa10.79□□□□□ -0.68
SMAD4-206ENST00000588860 VSIG10Q8N0Z9 540 aa10.79□□□□□ -0.68
SMAD4-206ENST00000588860 RHPN1Q8TCX5 695 aa10.79□□□□□ -0.68
SMAD4-206ENST00000588860 SYTL4Q96C24 671 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-206ENST00000588860 TEX13AQ9BXU3 409 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-206ENST00000588860 OSBPL3Q9H4L5 887 aa10.79□□□□□ -0.68
SMAD4-206ENST00000588860 BICC1Q9H694 974 aaKnown RBP10.79□□□□□ -0.68
SMAD4-206ENST00000588860 IL1RAPL2Q9NP60 686 aa10.79□□□□□ -0.68
SMAD4-206ENST00000588860 CICQ96RK0 1608 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-206ENST00000588860 SALL3Q9BXA9 1300 aa10.79□□□□□ -0.68
SMAD4-206ENST00000588860 COL5A3P25940 1745 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-206ENST00000588860 ATP5J2-PTCD1G3V325 749 aa10.78□□□□□ -0.68
SMAD4-206ENST00000588860 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-206ENST00000588860 SDSP20132 328 aa10.78□□□□□ -0.68
SMAD4-206ENST00000588860 PRIM1P49642 420 aaKnown RBP10.78□□□□□ -0.68
SMAD4-206ENST00000588860 LCE2DQ5TA82 110 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-206ENST00000588860 BARGINQ6ZT62 677 aa10.78□□□□□ -0.68
SMAD4-206ENST00000588860 KIF1BPQ96EK5 621 aa10.78□□□□□ -0.68
SMAD4-206ENST00000588860 FAM163AQ96GL9 167 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-206ENST00000588860 KAZALD1Q96I82 304 aa10.78□□□□□ -0.68
SMAD4-206ENST00000588860 ZBTB3Q9H5J0 574 aa10.78□□□□□ -0.68
SMAD4-206ENST00000588860 PPP1R1BQ9UD71 204 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-206ENST00000588860 AOX1Q06278 1338 aa10.78□□□□□ -0.68
SMAD4-206ENST00000588860 EIF5BO60841 1220 aaKnown RBP10.77□□□□□ -0.69
SMAD4-206ENST00000588860 STARD3NLO95772 234 aa10.77□□□□□ -0.69
SMAD4-206ENST00000588860 SLC4A3P48751 1232 aa10.77□□□□□ -0.69
SMAD4-206ENST00000588860 TSHZ3Q63HK5 1081 aa10.77□□□□□ -0.69
SMAD4-206ENST00000588860 CASC1Q6TDU7 716 aa10.77□□□□□ -0.69
SMAD4-206ENST00000588860 KIF6Q6ZMV9 814 aa10.77□□□□□ -0.69
SMAD4-206ENST00000588860 NUTM1Q86Y26 1132 aa10.77□□□□□ -0.69
SMAD4-206ENST00000588860 ERC1Q8IUD2 1116 aa10.77□□□□□ -0.69
SMAD4-206ENST00000588860 JARID2Q92833 1246 aaPredicted RBP10.77□□□□□ -0.69
SMAD4-206ENST00000588860 ANP32EQ9BTT0 268 aa10.77□□□□□ -0.69
SMAD4-206ENST00000588860 ZNF330Q9Y3S2 320 aaPredicted RBP10.77□□□□□ -0.69
SMAD4-206ENST00000588860 MYH14Q7Z406 1995 aaKnown RBP10.77□□□□□ -0.69
SMAD4-206ENST00000588860 BTAF1O14981 1849 aa10.77□□□□□ -0.69
SMAD4-206ENST00000588860 COL15A1P39059 1388 aa10.77□□□□□ -0.69
SMAD4-206ENST00000588860 THSD7AQ9UPZ6 1657 aa10.76□□□□□ -0.69
SMAD4-206ENST00000588860 A0A087WZG4 1122 aa10.76□□□□□ -0.69
SMAD4-206ENST00000588860 BECN1Q14457 450 aa10.76□□□□□ -0.69
SMAD4-206ENST00000588860 UBE3BQ7Z3V4 1068 aa10.76□□□□□ -0.69
SMAD4-206ENST00000588860 MARCH10Q8NA82 808 aaPredicted RBP10.76□□□□□ -0.69
SMAD4-206ENST00000588860 ACSBG1Q96GR2 724 aa10.76□□□□□ -0.69
SMAD4-206ENST00000588860 CWC25Q9NXE8 425 aaPredicted RBP10.76□□□□□ -0.69
SMAD4-206ENST00000588860 STAP2Q9UGK3 403 aa10.76□□□□□ -0.69
SMAD4-206ENST00000588860 PA2G4Q9UQ80 394 aaKnown RBP10.76□□□□□ -0.69
SMAD4-206ENST00000588860 SBF2Q86WG5 1849 aa10.76□□□□□ -0.69
SMAD4-206ENST00000588860 ZNF831Q5JPB2 1677 aa10.76□□□□□ -0.69
SMAD4-206ENST00000588860 G3BP1Q13283 466 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMAD4-206ENST00000588860 VPS72Q15906 364 aa10.75□□□□□ -0.69
SMAD4-206ENST00000588860 EZH2Q15910 746 aaKnown RBP10.75□□□□□ -0.69
SMAD4-206ENST00000588860 EPHA10Q5JZY3 1008 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms