RNA–Protein interactions for RNA: ENST00000585887.3

LSM14A-204, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 445 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-204ENST00000585887 DDX60Q8IY21 1712 aaKnown RBP21.52■■□□□ 1.04
LSM14A-204ENST00000585887 CRY2Q49AN0 593 aa21.52■■□□□ 1.04
LSM14A-204ENST00000585887 TAOK3Q9H2K8 898 aa21.52■■□□□ 1.04
LSM14A-204ENST00000585887 HYPKQ9NX55 129 aa21.52■■□□□ 1.04
LSM14A-204ENST00000585887 ZC3H4Q9UPT8 1303 aaKnown RBP21.52■■□□□ 1.03
LSM14A-204ENST00000585887 TCIRG1Q13488 830 aa21.51■■□□□ 1.03
LSM14A-204ENST00000585887 SOGA3Q5TF21 947 aa21.51■■□□□ 1.03
LSM14A-204ENST00000585887 OLFM4Q6UX06 510 aa21.51■■□□□ 1.03
LSM14A-204ENST00000585887 C3orf67Q6ZVT6 689 aa21.51■■□□□ 1.03
LSM14A-204ENST00000585887 PLBD2Q8NHP8 589 aa21.51■■□□□ 1.03
LSM14A-204ENST00000585887 C7orf43Q8WVR3 580 aa21.51■■□□□ 1.03
LSM14A-204ENST00000585887 LTBP3Q9NS15 1303 aa21.51■■□□□ 1.03
LSM14A-204ENST00000585887 CCDC93Q567U6 631 aa21.5■■□□□ 1.03
LSM14A-204ENST00000585887 NLRP10Q86W26 655 aa21.5■■□□□ 1.03
LSM14A-204ENST00000585887 RPGRQ92834 1020 aaKnown RBP21.5■■□□□ 1.03
LSM14A-204ENST00000585887 ZNF428Q96B54 188 aa21.5■■□□□ 1.03
LSM14A-204ENST00000585887 SALL2Q9Y467 1007 aaPredicted RBP21.5■■□□□ 1.03
LSM14A-204ENST00000585887 KDM2BQ8NHM5 1336 aa21.5■■□□□ 1.03
LSM14A-204ENST00000585887 TAF1P21675 1872 aa21.49■■□□□ 1.03
LSM14A-204ENST00000585887 ANKRD13DQ6ZTN6 518 aa21.49■■□□□ 1.03
LSM14A-204ENST00000585887 TSPYL6Q8N831 410 aa21.49■■□□□ 1.03
LSM14A-204ENST00000585887 ALDH1B1P30837 517 aa21.48■■□□□ 1.03
LSM14A-204ENST00000585887 FAM9BQ8IZU0 186 aa21.48■■□□□ 1.03
LSM14A-204ENST00000585887 PHAXQ9H814 394 aaKnown RBP21.47■■□□□ 1.03
LSM14A-204ENST00000585887 RNF123Q5XPI4 1314 aa21.47■■□□□ 1.03
LSM14A-204ENST00000585887 ATP5J2-PTCD1G3V325 749 aa21.46■■□□□ 1.03
LSM14A-204ENST00000585887 HOXA10P31260 410 aaPredicted RBP21.46■■□□□ 1.03
LSM14A-204ENST00000585887 SYNE4Q8N205 404 aa21.46■■□□□ 1.03
LSM14A-204ENST00000585887 TRMT112Q9UI30 125 aaKnown RBP21.46■■□□□ 1.03
LSM14A-204ENST00000585887 IL16Q14005 1332 aa21.46■■□□□ 1.03
LSM14A-204ENST00000585887 CACNA1FO60840 1977 aa21.45■■□□□ 1.02
LSM14A-204ENST00000585887 HCLS1P14317 486 aaPredicted RBP21.45■■□□□ 1.02
LSM14A-204ENST00000585887 GOLGA2Q08379 1002 aa21.45■■□□□ 1.02
LSM14A-204ENST00000585887 NCBP3Q53F19 620 aaKnown RBP21.45■■□□□ 1.02
LSM14A-204ENST00000585887 SLC10A5Q5PT55 438 aa21.45■■□□□ 1.02
LSM14A-204ENST00000585887 CCDC30Q5VVM6 783 aa21.45■■□□□ 1.02
LSM14A-204ENST00000585887 RBM17Q96I25 401 aaKnown RBP21.45■■□□□ 1.02
LSM14A-204ENST00000585887 NLRP3Q96P20 1036 aa21.45■■□□□ 1.02
LSM14A-204ENST00000585887 ISCA1Q9BUE6 129 aa21.45■■□□□ 1.02
LSM14A-204ENST00000585887 SH3TC1Q8TE82 1336 aa21.45■■□□□ 1.02
LSM14A-204ENST00000585887 SNED1Q8TER0 1413 aa21.45■■□□□ 1.02
LSM14A-204ENST00000585887 WDR90Q96KV7 1748 aa21.44■■□□□ 1.02
LSM14A-204ENST00000585887 GLTPD2A6NH11 291 aa21.44■■□□□ 1.02
LSM14A-204ENST00000585887 FKBP4Q02790 459 aaKnown RBP eCLIP21.44■■□□□ 1.02
LSM14A-204ENST00000585887 SLC51AQ86UW1 340 aa21.44■■□□□ 1.02
LSM14A-204ENST00000585887 RRAGCQ9HB90 399 aa21.44■■□□□ 1.02
LSM14A-204ENST00000585887 TCERG1O14776 1098 aaKnown RBP21.43■■□□□ 1.02
LSM14A-204ENST00000585887 RIC3Q7Z5B4 369 aa21.43■■□□□ 1.02
LSM14A-204ENST00000585887 RTKN2Q8IZC4 609 aa21.43■■□□□ 1.02
LSM14A-204ENST00000585887 CRAMP1Q96RY5 1269 aa21.43■■□□□ 1.02
LSM14A-204ENST00000585887 ZNF277Q9NRM2 450 aaPredicted RBP21.43■■□□□ 1.02
LSM14A-204ENST00000585887 FANCIQ9NVI1 1328 aa21.43■■□□□ 1.02
LSM14A-204ENST00000585887 PPEF1O14829 653 aaPredicted RBP21.42■■□□□ 1.02
LSM14A-204ENST00000585887 TWISTNBQ3B726 338 aaPredicted RBP21.42■■□□□ 1.02
LSM14A-204ENST00000585887 C16orf71Q8IYS4 520 aaPredicted RBP21.42■■□□□ 1.02
LSM14A-204ENST00000585887 ABCC4O15439 1325 aa21.41■■□□□ 1.02
LSM14A-204ENST00000585887 TOMM70O94826 608 aa21.41■■□□□ 1.02
LSM14A-204ENST00000585887 WDR63Q8IWG1 891 aa21.4■■□□□ 1.02
LSM14A-204ENST00000585887 CHMP4AQ9BY43 222 aa21.4■■□□□ 1.02
LSM14A-204ENST00000585887 RTL5Q5HYW3 569 aaPredicted RBP21.39■■□□□ 1.01
LSM14A-204ENST00000585887 FAM89AQ96GI7 184 aa21.39■■□□□ 1.01
LSM14A-204ENST00000585887 MYD88Q99836 296 aa21.39■■□□□ 1.01
LSM14A-204ENST00000585887 STK31Q9BXU1 1019 aa21.39■■□□□ 1.01
LSM14A-204ENST00000585887 CC2D2BQ6DHV5 1058 aa21.38■■□□□ 1.01
LSM14A-204ENST00000585887 LRRC37AA6NMS7 1700 aa21.38■■□□□ 1.01
LSM14A-204ENST00000585887 COL4A5P29400 1685 aa21.37■■□□□ 1.01
LSM14A-204ENST00000585887 DDX58O95786 925 aaKnown RBP21.37■■□□□ 1.01
LSM14A-204ENST00000585887 HSPA6P17066 643 aa21.37■■□□□ 1.01
LSM14A-204ENST00000585887 IARSP41252 1262 aaKnown RBP21.37■■□□□ 1.01
LSM14A-204ENST00000585887 TRIM28Q13263 835 aaKnown RBP21.37■■□□□ 1.01
LSM14A-204ENST00000585887 DPY19L2Q6NUT2 758 aa21.37■■□□□ 1.01
LSM14A-204ENST00000585887 RBM46Q8TBY0 533 aaKnown RBP21.37■■□□□ 1.01
LSM14A-204ENST00000585887 PSMD1Q99460 953 aa21.37■■□□□ 1.01
LSM14A-204ENST00000585887 COL4A1P02462 1669 aa21.37■■□□□ 1.01
LSM14A-204ENST00000585887 MYH3P11055 1940 aa21.36■■□□□ 1.01
LSM14A-204ENST00000585887 VEGFAP15692 232 aaPredicted RBP21.36■■□□□ 1.01
LSM14A-204ENST00000585887 SPINK5Q9NQ38 1064 aaPredicted RBP21.36■■□□□ 1.01
LSM14A-204ENST00000585887 ZNF541Q9H0D2 1346 aa21.35■■□□□ 1.01
LSM14A-204ENST00000585887 SCN4AP35499 1836 aa21.35■■□□□ 1.01
LSM14A-204ENST00000585887 DDNO94850 711 aaPredicted RBP21.35■■□□□ 1.01
LSM14A-204ENST00000585887 EXOSC9Q06265 439 aaKnown RBP21.35■■□□□ 1.01
LSM14A-204ENST00000585887 DDX46Q7L014 1031 aaKnown RBP21.35■■□□□ 1.01
LSM14A-204ENST00000585887 G2E3Q7L622 706 aa21.35■■□□□ 1.01
LSM14A-204ENST00000585887 METTL22Q9BUU2 404 aaPredicted RBP21.35■■□□□ 1.01
LSM14A-204ENST00000585887 MAP3K2Q9Y2U5 619 aa21.35■■□□□ 1.01
LSM14A-204ENST00000585887 ATP6V0A2Q9Y487 856 aa21.35■■□□□ 1.01
LSM14A-204ENST00000585887 IRS4O14654 1257 aaPredicted RBP21.34■■□□□ 1.01
LSM14A-204ENST00000585887 PI4KAP2A4QPH2 592 aa21.33■■□□□ 1.01
LSM14A-204ENST00000585887 POTECB2RU33 542 aa21.33■■□□□ 1.01
LSM14A-204ENST00000585887 SLC4A2P04920 1241 aa21.33■■□□□ 1.01
LSM14A-204ENST00000585887 GRAPQ13588 217 aa21.33■■□□□ 1.01
LSM14A-204ENST00000585887 KSR2Q6VAB6 950 aa21.33■■□□□ 1.01
LSM14A-204ENST00000585887 PI4KAP1Q8N8J0 262 aa21.33■■□□□ 1.01
LSM14A-204ENST00000585887 ZBTB38Q8NAP3 1195 aaPredicted RBP21.33■■□□□ 1.01
LSM14A-204ENST00000585887 GRAPLQ8TC17 118 aaPredicted RBP21.33■■□□□ 1.01
LSM14A-204ENST00000585887 TMX4Q9H1E5 349 aaPredicted RBP21.33■■□□□ 1.01
LSM14A-204ENST00000585887 CWC25Q9NXE8 425 aaPredicted RBP21.33■■□□□ 1.01
LSM14A-204ENST00000585887 SPEF2Q9C093 1822 aa21.32■■□□□ 1
LSM14A-204ENST00000585887 GRIPAP1Q4V328 841 aa21.32■■□□□ 1
LSM14A-204ENST00000585887 CCDC191Q8NCU4 936 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms