RNA–Protein interactions for RNA: ENST00000585652.5

AP3D1-203, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 4,433 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-203ENST00000585652 USP44Q9H0E7 712 aa15.34■□□□□ 0.05
AP3D1-203ENST00000585652 HMGB1P09429 215 aaKnown RBP15.34■□□□□ 0.05
AP3D1-203ENST00000585652 GSPT1P15170 499 aaKnown RBP15.34■□□□□ 0.05
AP3D1-203ENST00000585652 TFCP2Q12800 502 aa15.34■□□□□ 0.05
AP3D1-203ENST00000585652 ZSCAN30Q86W11 494 aa15.34■□□□□ 0.05
AP3D1-203ENST00000585652 GOLGA8BA8MQT2 603 aa15.33■□□□□ 0.05
AP3D1-203ENST00000585652 AK2P54819 239 aa15.33■□□□□ 0.05
AP3D1-203ENST00000585652 BRPF1P55201 1214 aaPredicted RBP15.33■□□□□ 0.05
AP3D1-203ENST00000585652 ZNF652Q9Y2D9 606 aa15.33■□□□□ 0.05
AP3D1-203ENST00000585652 ZSCAN23Q3MJ62 389 aa15.33■□□□□ 0.04
AP3D1-203ENST00000585652 CCDC144CPQ8IYA2 1237 aa15.33■□□□□ 0.04
AP3D1-203ENST00000585652 ZNF496Q96IT1 587 aaPredicted RBP15.33■□□□□ 0.04
AP3D1-203ENST00000585652 IQSEC3Q9UPP2 1182 aaPredicted RBP15.33■□□□□ 0.04
AP3D1-203ENST00000585652 CNPY2Q9Y2B0 182 aa15.33■□□□□ 0.04
AP3D1-203ENST00000585652 TPM2P07951 284 aa15.33■□□□□ 0.04
AP3D1-203ENST00000585652 PDIA4P13667 645 aaKnown RBP15.33■□□□□ 0.04
AP3D1-203ENST00000585652 RBM10P98175 930 aaKnown RBP15.33■□□□□ 0.04
AP3D1-203ENST00000585652 TTC41PQ6P2S7 1318 aa15.32■□□□□ 0.04
AP3D1-203ENST00000585652 RRP9O43818 475 aaKnown RBP15.32■□□□□ 0.04
AP3D1-203ENST00000585652 ZSCAN22P10073 491 aaPredicted RBP15.32■□□□□ 0.04
AP3D1-203ENST00000585652 TIMM10P62072 90 aa15.32■□□□□ 0.04
AP3D1-203ENST00000585652 KIAA0232Q92628 1395 aa15.32■□□□□ 0.04
AP3D1-203ENST00000585652 UNC13BO14795 1591 aa15.32■□□□□ 0.04
AP3D1-203ENST00000585652 SERPINC1P01008 464 aa15.32■□□□□ 0.04
AP3D1-203ENST00000585652 SLC5A1P13866 664 aa15.32■□□□□ 0.04
AP3D1-203ENST00000585652 IKQ13123 557 aaPredicted RBP15.32■□□□□ 0.04
AP3D1-203ENST00000585652 CFAP74Q9C0B2 1584 aa15.32■□□□□ 0.04
AP3D1-203ENST00000585652 RTL1A6NKG5 1358 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 IPO7O95373 1038 aaKnown RBP15.31■□□□□ 0.04
AP3D1-203ENST00000585652 ARHGEF10O15013 1369 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 HMG20BQ9P0W2 317 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 USP16Q9Y5T5 823 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 MAP3K4Q9Y6R4 1608 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 ZPR1O75312 459 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 IL15P40933 162 aaPredicted RBP15.31■□□□□ 0.04
AP3D1-203ENST00000585652 HMGN5P82970 282 aaKnown RBP15.31■□□□□ 0.04
AP3D1-203ENST00000585652 PDE4CQ08493 712 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 ATP2B3Q16720 1220 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 CAVIN4Q5BKX8 364 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 MICU3Q86XE3 530 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 CEP57L1Q8IYX8 460 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 HELBQ8NG08 1087 aaPredicted RBP15.31■□□□□ 0.04
AP3D1-203ENST00000585652 BABAM1Q9NWV8 329 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 NDUFB9Q9Y6M9 179 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 FAM135BQ49AJ0 1406 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 CROCC2H7BZ55 1655 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 AATKQ6ZMQ8 1374 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 A1BGP04217 495 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 POLR3DP05423 398 aaPredicted RBP15.31■□□□□ 0.04
AP3D1-203ENST00000585652 MCMDC2Q4G0Z9 681 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 GIMAP6Q6P9H5 292 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 CHST3Q7LGC8 479 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 SHROOM2Q13796 1616 aa15.31■□□□□ 0.04
AP3D1-203ENST00000585652 HCLS1P14317 486 aaPredicted RBP15.3■□□□□ 0.04
AP3D1-203ENST00000585652 USP48Q86UV5 1035 aa15.3■□□□□ 0.04
AP3D1-203ENST00000585652 IFIT3O14879 490 aaKnown RBP15.3■□□□□ 0.04
AP3D1-203ENST00000585652 RANBP6O60518 1105 aaKnown RBP15.3■□□□□ 0.04
AP3D1-203ENST00000585652 HOXB7P09629 217 aa15.3■□□□□ 0.04
AP3D1-203ENST00000585652 KLHL34Q8N239 644 aa15.3■□□□□ 0.04
AP3D1-203ENST00000585652 SUCLG2Q96I99 432 aa15.3■□□□□ 0.04
AP3D1-203ENST00000585652 DNM1Q05193 864 aaKnown RBP15.29■□□□□ 0.04
AP3D1-203ENST00000585652 CREB3L3Q68CJ9 461 aa15.29■□□□□ 0.04
AP3D1-203ENST00000585652 TTLL5Q6EMB2 1281 aa15.29■□□□□ 0.04
AP3D1-203ENST00000585652 FAM89AQ96GI7 184 aa15.29■□□□□ 0.04
AP3D1-203ENST00000585652 ORC3Q9UBD5 711 aaPredicted RBP15.29■□□□□ 0.04
AP3D1-203ENST00000585652 UBE2HP62256 183 aa15.29■□□□□ 0.04
AP3D1-203ENST00000585652 SLC52A2Q9HAB3 445 aa15.29■□□□□ 0.04
AP3D1-203ENST00000585652 PAG1Q9NWQ8 432 aa15.29■□□□□ 0.04
AP3D1-203ENST00000585652 Q6ZUG5 572 aa15.28■□□□□ 0.04
AP3D1-203ENST00000585652 RNF17Q9BXT8 1623 aaKnown RBP15.28■□□□□ 0.04
AP3D1-203ENST00000585652 GIGYF1O75420 1035 aaPredicted RBP15.28■□□□□ 0.04
AP3D1-203ENST00000585652 FAM227BQ96M60 508 aa15.28■□□□□ 0.04
AP3D1-203ENST00000585652 DBNDD2Q9BQY9 259 aa15.28■□□□□ 0.04
AP3D1-203ENST00000585652 ZNF853P0CG23 659 aa15.28■□□□□ 0.04
AP3D1-203ENST00000585652 ANKIB1Q9P2G1 1089 aa15.28■□□□□ 0.04
AP3D1-203ENST00000585652 SLC12A7Q9Y666 1083 aa15.28■□□□□ 0.04
AP3D1-203ENST00000585652 METTL22Q9BUU2 404 aaPredicted RBP15.27■□□□□ 0.04
AP3D1-203ENST00000585652 PRIM1P49642 420 aaKnown RBP15.27■□□□□ 0.04
AP3D1-203ENST00000585652 AEBP2Q6ZN18 517 aaPredicted RBP15.27■□□□□ 0.04
AP3D1-203ENST00000585652 ATP7BP35670 1465 aa15.27■□□□□ 0.04
AP3D1-203ENST00000585652 ATP6V1AP38606 617 aa15.27■□□□□ 0.03
AP3D1-203ENST00000585652 SLC9C2Q5TAH2 1124 aa15.27■□□□□ 0.03
AP3D1-203ENST00000585652 SIRT2Q8IXJ6 389 aa15.27■□□□□ 0.03
AP3D1-203ENST00000585652 BTG4Q9NY30 223 aa15.27■□□□□ 0.03
AP3D1-203ENST00000585652 ARAP3Q8WWN8 1544 aa15.27■□□□□ 0.03
AP3D1-203ENST00000585652 TXLNAP40222 546 aa15.27■□□□□ 0.03
AP3D1-203ENST00000585652 SLC4A8Q2Y0W8 1093 aa15.27■□□□□ 0.03
AP3D1-203ENST00000585652 MNS1Q8NEH6 495 aa15.27■□□□□ 0.03
AP3D1-203ENST00000585652 ZNF594Q96JF6 807 aaPredicted RBP15.27■□□□□ 0.03
AP3D1-203ENST00000585652 USP6P35125 1406 aa15.26■□□□□ 0.03
AP3D1-203ENST00000585652 KLF18A0A0U1RQI7 1052 aa15.26■□□□□ 0.03
AP3D1-203ENST00000585652 CCDC129Q6ZRS4 1044 aa15.26■□□□□ 0.03
AP3D1-203ENST00000585652 FSIP1Q8NA03 581 aa15.26■□□□□ 0.03
AP3D1-203ENST00000585652 NOC3LQ8WTT2 800 aaKnown RBP15.26■□□□□ 0.03
AP3D1-203ENST00000585652 PLEKHG1Q9ULL1 1385 aa15.26■□□□□ 0.03
AP3D1-203ENST00000585652 GOLGA8AA7E2F4 631 aa15.26■□□□□ 0.03
AP3D1-203ENST00000585652 CCDC171Q6TFL3 1326 aa15.26■□□□□ 0.03
AP3D1-203ENST00000585652 SGSM2O43147 1006 aa15.26■□□□□ 0.03
AP3D1-203ENST00000585652 NCOA7Q8NI08 942 aa15.26■□□□□ 0.03
AP3D1-203ENST00000585652 BIN1O00499 593 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms