RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 GRIPAP1Q4V328 841 aa21.45■■□□□ 1.02
LSM12-202ENST00000585388 LRP10Q7Z4F1 713 aa21.45■■□□□ 1.02
LSM12-202ENST00000585388 ZNF541Q9H0D2 1346 aa21.45■■□□□ 1.02
LSM12-202ENST00000585388 PDIA6Q15084 440 aa21.44■■□□□ 1.02
LSM12-202ENST00000585388 LDHDQ86WU2 507 aa21.44■■□□□ 1.02
LSM12-202ENST00000585388 SYNE4Q8N205 404 aa21.44■■□□□ 1.02
LSM12-202ENST00000585388 RBM17Q96I25 401 aaKnown RBP21.44■■□□□ 1.02
LSM12-202ENST00000585388 TAF1DQ9H5J8 278 aaPredicted RBP21.44■■□□□ 1.02
LSM12-202ENST00000585388 RNF123Q5XPI4 1314 aa21.44■■□□□ 1.02
LSM12-202ENST00000585388 JDP2Q8WYK2 163 aa21.43■■□□□ 1.02
LSM12-202ENST00000585388 CRAMP1Q96RY5 1269 aa21.43■■□□□ 1.02
LSM12-202ENST00000585388 FZD9O00144 591 aa21.42■■□□□ 1.02
LSM12-202ENST00000585388 POTEIP0CG38 1075 aa21.42■■□□□ 1.02
LSM12-202ENST00000585388 POTEJP0CG39 1038 aa21.42■■□□□ 1.02
LSM12-202ENST00000585388 HSP90AB3PQ58FF7 597 aa21.42■■□□□ 1.02
LSM12-202ENST00000585388 CCDC146Q8IYE0 955 aa21.42■■□□□ 1.02
LSM12-202ENST00000585388 RUNDC1Q96C34 613 aa21.42■■□□□ 1.02
LSM12-202ENST00000585388 HACL1Q9UJ83 578 aa21.42■■□□□ 1.02
LSM12-202ENST00000585388 PPEF1O14829 653 aaPredicted RBP21.41■■□□□ 1.02
LSM12-202ENST00000585388 NEUROD2Q15784 382 aa21.41■■□□□ 1.02
LSM12-202ENST00000585388 PROSER3Q2NL68 480 aa21.41■■□□□ 1.02
LSM12-202ENST00000585388 NLRP3Q96P20 1036 aa21.41■■□□□ 1.02
LSM12-202ENST00000585388 UTP14AQ9BVJ6 771 aaKnown RBP21.41■■□□□ 1.02
LSM12-202ENST00000585388 CREBZFQ9NS37 354 aa21.41■■□□□ 1.02
LSM12-202ENST00000585388 LAMB2P55268 1798 aa21.41■■□□□ 1.02
LSM12-202ENST00000585388 ADAMTSL1Q8N6G6 1762 aa21.41■■□□□ 1.02
LSM12-202ENST00000585388 ANXA1P04083 346 aa21.4■■□□□ 1.02
LSM12-202ENST00000585388 GPC2Q8N158 579 aa21.4■■□□□ 1.02
LSM12-202ENST00000585388 TMX4Q9H1E5 349 aaPredicted RBP21.4■■□□□ 1.02
LSM12-202ENST00000585388 CHL1O00533 1208 aa21.39■■□□□ 1.01
LSM12-202ENST00000585388 COL4A5P29400 1685 aa21.38■■□□□ 1.01
LSM12-202ENST00000585388 PCNTO95613 3336 aa21.38■■□□□ 1.01
LSM12-202ENST00000585388 EPHX2P34913 555 aa21.38■■□□□ 1.01
LSM12-202ENST00000585388 EIF6P56537 245 aaKnown RBP21.38■■□□□ 1.01
LSM12-202ENST00000585388 EAPPQ56P03 285 aaPredicted RBP21.38■■□□□ 1.01
LSM12-202ENST00000585388 COPS6Q7L5N1 327 aa21.38■■□□□ 1.01
LSM12-202ENST00000585388 PNMA8AQ86V59 439 aaPredicted RBP21.38■■□□□ 1.01
LSM12-202ENST00000585388 XAGE3Q8WTP9 111 aa21.38■■□□□ 1.01
LSM12-202ENST00000585388 NECTIN2Q92692 538 aa21.38■■□□□ 1.01
LSM12-202ENST00000585388 DDX21Q9NR30 783 aaKnown RBP eCLIP21.38■■□□□ 1.01
LSM12-202ENST00000585388 SLC10A5Q5PT55 438 aa21.37■■□□□ 1.01
LSM12-202ENST00000585388 C3orf67Q6ZVT6 689 aa21.37■■□□□ 1.01
LSM12-202ENST00000585388 LARGE2Q8N3Y3 721 aa21.37■■□□□ 1.01
LSM12-202ENST00000585388 TRIM35Q9UPQ4 493 aa21.37■■□□□ 1.01
LSM12-202ENST00000585388 LAS1LQ9Y4W2 734 aaKnown RBP21.37■■□□□ 1.01
LSM12-202ENST00000585388 HOXB7P09629 217 aa21.36■■□□□ 1.01
LSM12-202ENST00000585388 AIMP1Q12904 312 aaKnown RBP21.36■■□□□ 1.01
LSM12-202ENST00000585388 PASKQ96RG2 1323 aa21.35■■□□□ 1.01
LSM12-202ENST00000585388 TCERG1O14776 1098 aaKnown RBP21.35■■□□□ 1.01
LSM12-202ENST00000585388 HDGFL1Q5TGJ6 251 aa21.35■■□□□ 1.01
LSM12-202ENST00000585388 NLRP10Q86W26 655 aa21.35■■□□□ 1.01
LSM12-202ENST00000585388 CLEC11AQ9Y240 323 aa21.35■■□□□ 1.01
LSM12-202ENST00000585388 ABCC4O15439 1325 aa21.34■■□□□ 1.01
LSM12-202ENST00000585388 HSPA1AP0DMV8 641 aaKnown RBP21.34■■□□□ 1.01
LSM12-202ENST00000585388 HSPA1BP0DMV9 641 aaKnown RBP21.34■■□□□ 1.01
LSM12-202ENST00000585388 TCIRG1Q13488 830 aa21.34■■□□□ 1.01
LSM12-202ENST00000585388 KRT24Q2M2I5 525 aa21.34■■□□□ 1.01
LSM12-202ENST00000585388 CHPF2Q9P2E5 772 aa21.34■■□□□ 1.01
LSM12-202ENST00000585388 ADAMTS8Q9UP79 889 aa21.34■■□□□ 1.01
LSM12-202ENST00000585388 ATP6V0A2Q9Y487 856 aa21.34■■□□□ 1.01
LSM12-202ENST00000585388 SH3TC1Q8TE82 1336 aa21.33■■□□□ 1.01
LSM12-202ENST00000585388 LMOD1P29536 600 aaPredicted RBP21.33■■□□□ 1.01
LSM12-202ENST00000585388 NIM1KQ8IY84 436 aa21.33■■□□□ 1.01
LSM12-202ENST00000585388 VPS33BQ9H267 617 aa21.33■■□□□ 1.01
LSM12-202ENST00000585388 MKRN1Q9UHC7 482 aaKnown RBP21.33■■□□□ 1.01
LSM12-202ENST00000585388 TRMT112Q9UI30 125 aaKnown RBP21.33■■□□□ 1.01
LSM12-202ENST00000585388 GJA3Q9Y6H8 435 aa21.33■■□□□ 1.01
LSM12-202ENST00000585388 PPIP5K2O43314 1243 aa21.32■■□□□ 1
LSM12-202ENST00000585388 SUPT20HQ8NEM7 779 aa21.32■■□□□ 1
LSM12-202ENST00000585388 CFAP44Q96MT7 982 aa21.32■■□□□ 1
LSM12-202ENST00000585388 PRKRIP1Q9H875 184 aaPredicted RBP21.32■■□□□ 1
LSM12-202ENST00000585388 DBF4Q9UBU7 674 aaPredicted RBP21.32■■□□□ 1
LSM12-202ENST00000585388 CNTNAP1P78357 1384 aa21.32■■□□□ 1
LSM12-202ENST00000585388 LTBP1Q14766 1721 aa21.32■■□□□ 1
LSM12-202ENST00000585388 DDX60Q8IY21 1712 aaKnown RBP21.32■■□□□ 1
LSM12-202ENST00000585388 TMEM88BA6NKF7 163 aa21.31■■□□□ 1
LSM12-202ENST00000585388 BBOX1O75936 387 aa21.31■■□□□ 1
LSM12-202ENST00000585388 ITGBL1O95965 494 aaPredicted RBP21.31■■□□□ 1
LSM12-202ENST00000585388 COL13A1Q5TAT6 717 aaPredicted RBP21.31■■□□□ 1
LSM12-202ENST00000585388 LRRC37AA6NMS7 1700 aa21.3■■□□□ 1
LSM12-202ENST00000585388 HCLS1P14317 486 aaPredicted RBP21.3■■□□□ 1
LSM12-202ENST00000585388 DDX46Q7L014 1031 aaKnown RBP21.3■■□□□ 1
LSM12-202ENST00000585388 SLC51AQ86UW1 340 aa21.3■■□□□ 1
LSM12-202ENST00000585388 PLBD2Q8NHP8 589 aa21.3■■□□□ 1
LSM12-202ENST00000585388 AOC3Q16853 763 aa21.29■■□□□ 1
LSM12-202ENST00000585388 HYPKQ9NX55 129 aa21.29■■□□□ 1
LSM12-202ENST00000585388 SCNN1DP51172 638 aa21.28■■□□□ 1
LSM12-202ENST00000585388 CALD1Q05682 793 aaKnown RBP21.28■■□□□ 1
LSM12-202ENST00000585388 GRAPQ13588 217 aa21.28■■□□□ 1
LSM12-202ENST00000585388 MAP1SQ66K74 1059 aaPredicted RBP21.28■■□□□ 1
LSM12-202ENST00000585388 DPP8Q6V1X1 898 aaPredicted RBP21.28■■□□□ 1
LSM12-202ENST00000585388 ANKRD13DQ6ZTN6 518 aa21.28■■□□□ 1
LSM12-202ENST00000585388 TMC4Q7Z404 712 aa21.28■■□□□ 1
LSM12-202ENST00000585388 SP8Q8IXZ3 490 aa21.28■■□□□ 1
LSM12-202ENST00000585388 CNTROBQ8N137 903 aa21.28■■□□□ 1
LSM12-202ENST00000585388 GRAPLQ8TC17 118 aaPredicted RBP21.28■■□□□ 1
LSM12-202ENST00000585388 RTFDC1Q9BY42 306 aaPredicted RBP21.28■■□□□ 1
LSM12-202ENST00000585388 MBIPQ9NS73 344 aa21.27■■□□□ 1
LSM12-202ENST00000585388 DUSP27Q5VZP5 1158 aa21.26■□□□□ 0.99
LSM12-202ENST00000585388 USP50Q70EL3 339 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms