RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
CDK5RAP3-237ENST00000585163 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-237ENST00000585163 G3BP1Q13283 466 aaKnown RBP eCLIP16.98■□□□□ 0.31
CDK5RAP3-237ENST00000585163 ANKLE2Q86XL3 938 aa16.98■□□□□ 0.31
CDK5RAP3-237ENST00000585163 ANKRD24Q8TF21 1146 aa16.98■□□□□ 0.31
CDK5RAP3-237ENST00000585163 FAM227BQ96M60 508 aa16.98■□□□□ 0.31
CDK5RAP3-237ENST00000585163 CAMTA1Q9Y6Y1 1673 aa16.97■□□□□ 0.31
CDK5RAP3-237ENST00000585163 HCLS1P14317 486 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-237ENST00000585163 DNM1Q05193 864 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP3-237ENST00000585163 USP25Q9UHP3 1055 aa16.97■□□□□ 0.31
CDK5RAP3-237ENST00000585163 LMTK3Q96Q04 1460 aa16.97■□□□□ 0.31
CDK5RAP3-237ENST00000585163 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-237ENST00000585163 FUCA2Q9BTY2 467 aa16.97■□□□□ 0.31
CDK5RAP3-237ENST00000585163 PDCL3Q9H2J4 239 aa16.97■□□□□ 0.31
CDK5RAP3-237ENST00000585163 ADAMTS7Q9UKP4 1686 aa16.96■□□□□ 0.31
CDK5RAP3-237ENST00000585163 KIAA2012Q0VF49 1180 aa16.96■□□□□ 0.31
CDK5RAP3-237ENST00000585163 PDIA6Q15084 440 aa16.96■□□□□ 0.31
CDK5RAP3-237ENST00000585163 CCDC8Q9H0W5 538 aaPredicted RBP16.96■□□□□ 0.3
CDK5RAP3-237ENST00000585163 TPCN1Q9ULQ1 816 aa16.96■□□□□ 0.3
CDK5RAP3-237ENST00000585163 PSMA5P28066 241 aa16.95■□□□□ 0.3
CDK5RAP3-237ENST00000585163 KCNJ4P48050 445 aa16.95■□□□□ 0.3
CDK5RAP3-237ENST00000585163 SLC27A2O14975 620 aa16.95■□□□□ 0.3
CDK5RAP3-237ENST00000585163 ADCY5O95622 1261 aa16.95■□□□□ 0.3
CDK5RAP3-237ENST00000585163 IGKV5-2P06315 115 aa16.95■□□□□ 0.3
CDK5RAP3-237ENST00000585163 NECAB1Q8N987 351 aa16.95■□□□□ 0.3
CDK5RAP3-237ENST00000585163 AIMP1Q12904 312 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP3-237ENST00000585163 TPRNQ4KMQ1 711 aa16.94■□□□□ 0.3
CDK5RAP3-237ENST00000585163 DDX54Q8TDD1 881 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP3-237ENST00000585163 TLR7Q9NYK1 1049 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP3-237ENST00000585163 UQCRHLA0A096LP55 91 aa16.94■□□□□ 0.3
CDK5RAP3-237ENST00000585163 A0A0D9SFI3 127 aa16.94■□□□□ 0.3
CDK5RAP3-237ENST00000585163 VPS37CA5D8V6 355 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-237ENST00000585163 DTNBO60941 627 aa16.94■□□□□ 0.3
CDK5RAP3-237ENST00000585163 UQCRHP07919 91 aa16.94■□□□□ 0.3
CDK5RAP3-237ENST00000585163 AXIN2Q9Y2T1 843 aa16.94■□□□□ 0.3
CDK5RAP3-237ENST00000585163 NPHP4O75161 1426 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 MED23Q9ULK4 1368 aa16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 KDM4AO75164 1064 aa16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 RNF20Q5VTR2 975 aa16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 GIMAP6Q6P9H5 292 aa16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 ORAI2Q96SN7 254 aa16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 BCL11BQ9C0K0 894 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 ALDH8A1Q9H2A2 487 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 MRC1P22897 1456 aa16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 LARP1BQ659C4 914 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 LARP1Q6PKG0 1096 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 SASS6Q6UVJ0 657 aa16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 FSD1Q9BTV5 496 aa16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 BOLA2Q9H3K6 86 aa16.93■□□□□ 0.3
CDK5RAP3-237ENST00000585163 A0A0U1RQG5 324 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-237ENST00000585163 COL9A3Q14050 684 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-237ENST00000585163 ANKRD1Q15327 319 aa16.92■□□□□ 0.3
CDK5RAP3-237ENST00000585163 RIC3Q7Z5B4 369 aa16.92■□□□□ 0.3
CDK5RAP3-237ENST00000585163 SIL1Q9H173 461 aa16.92■□□□□ 0.3
CDK5RAP3-237ENST00000585163 JCADQ9P266 1359 aa16.92■□□□□ 0.3
CDK5RAP3-237ENST00000585163 BLOC1S2Q6QNY1 142 aa16.92■□□□□ 0.3
CDK5RAP3-237ENST00000585163 NEURL1BA8MQ27 555 aa16.91■□□□□ 0.3
CDK5RAP3-237ENST00000585163 PDCP20941 246 aa16.91■□□□□ 0.3
CDK5RAP3-237ENST00000585163 ZNF790Q6PG37 636 aa16.91■□□□□ 0.3
CDK5RAP3-237ENST00000585163 AEBP2Q6ZN18 517 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP3-237ENST00000585163 PIBF1Q8WXW3 757 aa16.91■□□□□ 0.3
CDK5RAP3-237ENST00000585163 DNAJC5Q9H3Z4 198 aa16.91■□□□□ 0.3
CDK5RAP3-237ENST00000585163 NEXNQ0ZGT2 675 aa16.91■□□□□ 0.3
CDK5RAP3-237ENST00000585163 TSGA10IPQ3SY00 556 aa16.91■□□□□ 0.3
CDK5RAP3-237ENST00000585163 ELP1O95163 1332 aa16.9■□□□□ 0.3
CDK5RAP3-237ENST00000585163 DYNC1I1O14576 645 aa16.9■□□□□ 0.3
CDK5RAP3-237ENST00000585163 RPS6KB1P23443 525 aa16.9■□□□□ 0.3
CDK5RAP3-237ENST00000585163 KRT85P78386 507 aa16.9■□□□□ 0.3
CDK5RAP3-237ENST00000585163 GCKRQ14397 625 aa16.9■□□□□ 0.3
CDK5RAP3-237ENST00000585163 CDC37L1Q7L3B6 337 aa16.9■□□□□ 0.3
CDK5RAP3-237ENST00000585163 KLHDC4Q8TBB5 520 aa16.9■□□□□ 0.3
CDK5RAP3-237ENST00000585163 HMG20BQ9P0W2 317 aa16.9■□□□□ 0.3
CDK5RAP3-237ENST00000585163 LMOD2Q6P5Q4 547 aa16.9■□□□□ 0.3
CDK5RAP3-237ENST00000585163 TTC6Q86TZ1 520 aa16.9■□□□□ 0.3
CDK5RAP3-237ENST00000585163 ZNF589Q86UQ0 364 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-237ENST00000585163 ZNF830Q96NB3 372 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-237ENST00000585163 TAF6LQ9Y6J9 622 aa16.89■□□□□ 0.29
CDK5RAP3-237ENST00000585163 ERBB3P21860 1342 aa16.89■□□□□ 0.29
CDK5RAP3-237ENST00000585163 C5P01031 1676 aa16.89■□□□□ 0.29
CDK5RAP3-237ENST00000585163 RBM10P98175 930 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-237ENST00000585163 SLC39A6Q13433 755 aa16.89■□□□□ 0.29
CDK5RAP3-237ENST00000585163 TOB2Q14106 344 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-237ENST00000585163 EPHA10Q5JZY3 1008 aa16.89■□□□□ 0.29
CDK5RAP3-237ENST00000585163 MPNDQ8N594 471 aa16.89■□□□□ 0.29
CDK5RAP3-237ENST00000585163 METTL22Q9BUU2 404 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-237ENST00000585163 TRPM3Q9HCF6 1732 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 ZNF142P52746 1687 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 CCDC192P0DO97 292 aa16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 TCEANC2Q96MN5 208 aa16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 TTC12Q9H892 705 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 SLC52A2Q9HAB3 445 aa16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 COPRSQ9NQ92 184 aa16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 TAF5LO75529 589 aa16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 MYL6BP14649 208 aa16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 NOLC1Q14978 699 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 XAGE3Q8WTP9 111 aa16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 MAP7D2Q96T17 732 aa16.88■□□□□ 0.29
CDK5RAP3-237ENST00000585163 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
CDK5RAP3-237ENST00000585163 COPS6Q7L5N1 327 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms