RNA–Protein interactions for RNA: ENST00000583899.5

EIF4A1-230, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 3

Gene EIF4A1, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-230ENST00000583899 STK32BQ9NY57 414 aa8.47□□□□□ -1.05
EIF4A1-230ENST00000583899 TSR3Q9UJK0 312 aaKnown RBP8.47□□□□□ -1.05
EIF4A1-230ENST00000583899 CCNL1Q9UK58 526 aaPredicted RBP8.47□□□□□ -1.05
EIF4A1-230ENST00000583899 SCN7AQ01118 1682 aa8.46□□□□□ -1.05
EIF4A1-230ENST00000583899 N4BP2Q86UW6 1770 aaPredicted RBP8.46□□□□□ -1.05
EIF4A1-230ENST00000583899 PLCB2Q00722 1185 aa8.46□□□□□ -1.06
EIF4A1-230ENST00000583899 RSPH6AQ9H0K4 717 aa8.46□□□□□ -1.06
EIF4A1-230ENST00000583899 LGR6Q9HBX8 967 aa8.46□□□□□ -1.06
EIF4A1-230ENST00000583899 CHD4Q14839 1912 aa8.46□□□□□ -1.06
EIF4A1-230ENST00000583899 NBPF26B4DH59 902 aa8.45□□□□□ -1.06
EIF4A1-230ENST00000583899 RGS20O76081 388 aa8.45□□□□□ -1.06
EIF4A1-230ENST00000583899 PLEKHO1Q53GL0 409 aaPredicted RBP8.45□□□□□ -1.06
EIF4A1-230ENST00000583899 COL23A1Q86Y22 540 aaPredicted RBP8.45□□□□□ -1.06
EIF4A1-230ENST00000583899 DCAF5Q96JK2 942 aa8.45□□□□□ -1.06
EIF4A1-230ENST00000583899 PHACTR3Q96KR7 559 aa8.45□□□□□ -1.06
EIF4A1-230ENST00000583899 TMOD3Q9NYL9 352 aa8.45□□□□□ -1.06
EIF4A1-230ENST00000583899 HPS5Q9UPZ3 1129 aa8.45□□□□□ -1.06
EIF4A1-230ENST00000583899 NRXN2Q9P2S2 1712 aa8.45□□□□□ -1.06
EIF4A1-230ENST00000583899 LOC102724428A0A0B4J2F2 783 aa8.44□□□□□ -1.06
EIF4A1-230ENST00000583899 ERVV-2B6SEH9 535 aa8.44□□□□□ -1.06
EIF4A1-230ENST00000583899 SIK1P57059 783 aa8.44□□□□□ -1.06
EIF4A1-230ENST00000583899 AMOTQ4VCS5 1084 aa8.44□□□□□ -1.06
EIF4A1-230ENST00000583899 AKAP4Q5JQC9 854 aa8.44□□□□□ -1.06
EIF4A1-230ENST00000583899 SAMD7Q7Z3H4 446 aa8.44□□□□□ -1.06
EIF4A1-230ENST00000583899 MTFR1LQ9H019 292 aa8.44□□□□□ -1.06
EIF4A1-230ENST00000583899 SPON1Q9HCB6 807 aa8.44□□□□□ -1.06
EIF4A1-230ENST00000583899 CEMIPQ8WUJ3 1361 aa8.44□□□□□ -1.06
EIF4A1-230ENST00000583899 RNMTO43148 476 aaKnown RBP8.43□□□□□ -1.06
EIF4A1-230ENST00000583899 PADI6Q6TGC4 694 aa8.43□□□□□ -1.06
EIF4A1-230ENST00000583899 PNMA3Q9UL41 463 aa8.43□□□□□ -1.06
EIF4A1-230ENST00000583899 MAP3K5Q99683 1374 aa8.43□□□□□ -1.06
EIF4A1-230ENST00000583899 DLEC1Q9Y238 1755 aa8.43□□□□□ -1.06
EIF4A1-230ENST00000583899 ANKRD31Q8N7Z5 1873 aa8.43□□□□□ -1.06
EIF4A1-230ENST00000583899 NUDT18Q6ZVK8 323 aa8.42□□□□□ -1.06
EIF4A1-230ENST00000583899 NFATC2IPQ8NCF5 419 aa8.42□□□□□ -1.06
EIF4A1-230ENST00000583899 SMARCC1Q92922 1105 aaPredicted RBP8.42□□□□□ -1.06
EIF4A1-230ENST00000583899 SLC52A2Q9HAB3 445 aa8.42□□□□□ -1.06
EIF4A1-230ENST00000583899 U2SURPO15042 1029 aaKnown RBP8.41□□□□□ -1.06
EIF4A1-230ENST00000583899 HSP90AB1P08238 724 aaKnown RBP8.41□□□□□ -1.06
EIF4A1-230ENST00000583899 PRKAR2BP31323 418 aa8.41□□□□□ -1.06
EIF4A1-230ENST00000583899 PTGDRQ13258 359 aa8.41□□□□□ -1.06
EIF4A1-230ENST00000583899 SLC39A6Q13433 755 aa8.41□□□□□ -1.06
EIF4A1-230ENST00000583899 C1orf141Q5JVX7 400 aa8.41□□□□□ -1.06
EIF4A1-230ENST00000583899 IL17REQ8NFR9 667 aa8.41□□□□□ -1.06
EIF4A1-230ENST00000583899 TFCP2L1Q9NZI6 479 aa8.41□□□□□ -1.06
EIF4A1-230ENST00000583899 COL11A2P13942 1736 aaPredicted RBP8.4□□□□□ -1.06
EIF4A1-230ENST00000583899 CNTNAP4Q9C0A0 1308 aa8.4□□□□□ -1.06
EIF4A1-230ENST00000583899 CCER2I3L3R5 266 aa8.4□□□□□ -1.06
EIF4A1-230ENST00000583899 ATP6V1AP38606 617 aa8.4□□□□□ -1.06
EIF4A1-230ENST00000583899 CABP4P57796 275 aa8.4□□□□□ -1.06
EIF4A1-230ENST00000583899 PLEKHF1Q96S99 279 aa8.4□□□□□ -1.06
EIF4A1-230ENST00000583899 FHDC1Q9C0D6 1143 aaPredicted RBP8.4□□□□□ -1.06
EIF4A1-230ENST00000583899 ARFGEF1Q9Y6D6 1849 aa8.4□□□□□ -1.07
EIF4A1-230ENST00000583899 CACNA1SQ13698 1873 aa8.39□□□□□ -1.07
EIF4A1-230ENST00000583899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.39□□□□□ -1.07
EIF4A1-230ENST00000583899 ANP32CO43423 234 aa8.39□□□□□ -1.07
EIF4A1-230ENST00000583899 MSL1Q68DK7 614 aa8.39□□□□□ -1.07
EIF4A1-230ENST00000583899 SLC16A10Q8TF71 515 aa8.39□□□□□ -1.07
EIF4A1-230ENST00000583899 NUP98P52948 1817 aa8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 KCNQ3O43525 872 aa8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 PTCD1O75127 700 aaKnown RBP8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 CENPBP07199 599 aaPredicted RBP8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 SSFA2P28290 1259 aa8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 PPP4CP60510 307 aa8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 KCNC4Q03721 635 aa8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 INTS5Q6P9B9 1019 aaKnown RBP8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 ERICH6Q7L0X2 663 aa8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 DNAJC10Q8IXB1 793 aa8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 NLGN2Q8NFZ4 835 aa8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 ARXQ96QS3 562 aa8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 SYT17Q9BSW7 474 aa8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 ARFGEF2Q9Y6D5 1785 aa8.38□□□□□ -1.07
EIF4A1-230ENST00000583899 GNAT3A8MTJ3 354 aa8.37□□□□□ -1.07
EIF4A1-230ENST00000583899 SEMA3EO15041 775 aa8.37□□□□□ -1.07
EIF4A1-230ENST00000583899 GNPATO15228 680 aa8.37□□□□□ -1.07
EIF4A1-230ENST00000583899 U2AF1L5P0DN76 240 aaPredicted RBP8.37□□□□□ -1.07
EIF4A1-230ENST00000583899 U2AF1Q01081 240 aaKnown RBP eCLIP8.37□□□□□ -1.071e-10■■■■□ 21.4
EIF4A1-230ENST00000583899 DCTN1Q14203 1278 aa8.37□□□□□ -1.07
EIF4A1-230ENST00000583899 TJAP1Q5JTD0 557 aa8.37□□□□□ -1.07
EIF4A1-230ENST00000583899 RC3H1Q5TC82 1133 aaKnown RBP8.37□□□□□ -1.07
EIF4A1-230ENST00000583899 GAS2L2Q8NHY3 880 aa8.37□□□□□ -1.07
EIF4A1-230ENST00000583899 AK7Q96M32 723 aa8.37□□□□□ -1.07
EIF4A1-230ENST00000583899 CFAP53Q96M91 514 aa8.37□□□□□ -1.07
EIF4A1-230ENST00000583899 ANKRD36CQ5JPF3 1778 aa8.37□□□□□ -1.07
EIF4A1-230ENST00000583899 C10orf71Q711Q0 1435 aa8.37□□□□□ -1.07
EIF4A1-230ENST00000583899 HEG1Q9ULI3 1381 aa8.36□□□□□ -1.07
EIF4A1-230ENST00000583899 MYBBP1AQ9BQG0 1328 aaKnown RBP8.36□□□□□ -1.07
EIF4A1-230ENST00000583899 FCHSD2O94868 740 aa8.36□□□□□ -1.07
EIF4A1-230ENST00000583899 CYP19A1P11511 503 aaPredicted RBP8.36□□□□□ -1.07
EIF4A1-230ENST00000583899 CRKLP46109 303 aaKnown RBP8.36□□□□□ -1.07
EIF4A1-230ENST00000583899 RALBP1Q15311 655 aa8.36□□□□□ -1.07
EIF4A1-230ENST00000583899 MCM10Q7L590 875 aa8.36□□□□□ -1.07
EIF4A1-230ENST00000583899 ZNF496Q96IT1 587 aaPredicted RBP8.36□□□□□ -1.07
EIF4A1-230ENST00000583899 PRKRIP1Q9H875 184 aaPredicted RBP8.36□□□□□ -1.07
EIF4A1-230ENST00000583899 PPP1R1BQ9UD71 204 aaPredicted RBP8.36□□□□□ -1.07
EIF4A1-230ENST00000583899 PXDNLA1KZ92 1463 aa8.36□□□□□ -1.07
EIF4A1-230ENST00000583899 SOS1Q07889 1333 aaPredicted RBP8.35□□□□□ -1.07
EIF4A1-230ENST00000583899 SBF1O95248 1867 aa8.35□□□□□ -1.07
EIF4A1-230ENST00000583899 TNRC6CQ9HCJ0 1690 aaKnown RBP8.35□□□□□ -1.07
EIF4A1-230ENST00000583899 PRAMEF22A3QJZ6 481 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms