RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 STK31Q9BXU1 1019 aa23.2■■□□□ 1.3
ERBB2-211ENST00000582648 ZNF521Q96K83 1311 aa23.19■■□□□ 1.3
ERBB2-211ENST00000582648 ATP5J2-PTCD1G3V325 749 aa23.19■■□□□ 1.3
ERBB2-211ENST00000582648 PRPF40BQ6NWY9 871 aaKnown RBP23.19■■□□□ 1.3
ERBB2-211ENST00000582648 RIC3Q7Z5B4 369 aa23.19■■□□□ 1.3
ERBB2-211ENST00000582648 MIER1Q8N108 512 aa23.19■■□□□ 1.3
ERBB2-211ENST00000582648 CNKSR1Q969H4 720 aa23.19■■□□□ 1.3
ERBB2-211ENST00000582648 MYH16Q9H6N6 1097 aa23.19■■□□□ 1.3
ERBB2-211ENST00000582648 SBF1O95248 1867 aa23.19■■□□□ 1.3
ERBB2-211ENST00000582648 LAMB2P55268 1798 aa23.19■■□□□ 1.3
ERBB2-211ENST00000582648 RIC1Q4ADV7 1423 aa23.18■■□□□ 1.3
ERBB2-211ENST00000582648 C21orf2O43822 256 aa23.18■■□□□ 1.3
ERBB2-211ENST00000582648 NPR1P16066 1061 aa23.18■■□□□ 1.3
ERBB2-211ENST00000582648 CHMP4AQ9BY43 222 aa23.18■■□□□ 1.3
ERBB2-211ENST00000582648 KLRG2A4D1S0 409 aaPredicted RBP23.17■■□□□ 1.3
ERBB2-211ENST00000582648 FER1L6Q2WGJ9 1857 aa23.16■■□□□ 1.3
ERBB2-211ENST00000582648 CCDC88AQ3V6T2 1871 aa23.16■■□□□ 1.3
ERBB2-211ENST00000582648 C9orf131Q5VYM1 1079 aa23.16■■□□□ 1.3
ERBB2-211ENST00000582648 C3orf67Q6ZVT6 689 aa23.16■■□□□ 1.3
ERBB2-211ENST00000582648 ZNF526Q8TF50 670 aaPredicted RBP23.16■■□□□ 1.3
ERBB2-211ENST00000582648 TRMT112Q9UI30 125 aaKnown RBP23.16■■□□□ 1.3
ERBB2-211ENST00000582648 SYNE4Q8N205 404 aa23.15■■□□□ 1.3
ERBB2-211ENST00000582648 MYD88Q99836 296 aa23.15■■□□□ 1.3
ERBB2-211ENST00000582648 ISCA1Q9BUE6 129 aa23.15■■□□□ 1.3
ERBB2-211ENST00000582648 DDX60Q8IY21 1712 aaKnown RBP23.15■■□□□ 1.3
ERBB2-211ENST00000582648 CRY2Q49AN0 593 aa23.14■■□□□ 1.29
ERBB2-211ENST00000582648 G2E3Q7L622 706 aa23.14■■□□□ 1.29
ERBB2-211ENST00000582648 RPGRQ92834 1020 aaKnown RBP23.14■■□□□ 1.29
ERBB2-211ENST00000582648 RNF181Q9P0P0 153 aa23.14■■□□□ 1.29
ERBB2-211ENST00000582648 TIAM2Q8IVF5 1701 aa23.13■■□□□ 1.29
ERBB2-211ENST00000582648 RNF123Q5XPI4 1314 aa23.13■■□□□ 1.29
ERBB2-211ENST00000582648 SH3TC1Q8TE82 1336 aa23.13■■□□□ 1.29
ERBB2-211ENST00000582648 NFKBIEO00221 500 aa23.13■■□□□ 1.29
ERBB2-211ENST00000582648 VAMP4O75379 141 aa23.13■■□□□ 1.29
ERBB2-211ENST00000582648 DDX58O95786 925 aaKnown RBP23.13■■□□□ 1.29
ERBB2-211ENST00000582648 SLC4A2P04920 1241 aa23.13■■□□□ 1.29
ERBB2-211ENST00000582648 HCLS1P14317 486 aaPredicted RBP23.13■■□□□ 1.29
ERBB2-211ENST00000582648 CACNA1FO60840 1977 aa23.12■■□□□ 1.29
ERBB2-211ENST00000582648 RTL5Q5HYW3 569 aaPredicted RBP23.12■■□□□ 1.29
ERBB2-211ENST00000582648 MAP3K2Q9Y2U5 619 aa23.12■■□□□ 1.29
ERBB2-211ENST00000582648 OLFM4Q6UX06 510 aa23.11■■□□□ 1.29
ERBB2-211ENST00000582648 NLRP3Q96P20 1036 aa23.11■■□□□ 1.29
ERBB2-211ENST00000582648 PI4KAP2A4QPH2 592 aa23.1■■□□□ 1.29
ERBB2-211ENST00000582648 PRELPP51888 382 aa23.1■■□□□ 1.29
ERBB2-211ENST00000582648 PI4KAP1Q8N8J0 262 aa23.1■■□□□ 1.29
ERBB2-211ENST00000582648 FAM89AQ96GI7 184 aa23.1■■□□□ 1.29
ERBB2-211ENST00000582648 ALDH1B1P30837 517 aa23.09■■□□□ 1.29
ERBB2-211ENST00000582648 FLIIQ13045 1269 aa23.09■■□□□ 1.29
ERBB2-211ENST00000582648 RBM17Q96I25 401 aaKnown RBP23.09■■□□□ 1.29
ERBB2-211ENST00000582648 METTL22Q9BUU2 404 aaPredicted RBP23.09■■□□□ 1.29
ERBB2-211ENST00000582648 CCDC93Q567U6 631 aa23.08■■□□□ 1.29
ERBB2-211ENST00000582648 SLC10A5Q5PT55 438 aa23.08■■□□□ 1.29
ERBB2-211ENST00000582648 KSR2Q6VAB6 950 aa23.08■■□□□ 1.29
ERBB2-211ENST00000582648 SLC51AQ86UW1 340 aa23.08■■□□□ 1.29
ERBB2-211ENST00000582648 TAOK3Q9H2K8 898 aa23.08■■□□□ 1.29
ERBB2-211ENST00000582648 GPBP1L1Q9HC44 474 aaPredicted RBP23.08■■□□□ 1.29
ERBB2-211ENST00000582648 TAF1P21675 1872 aa23.07■■□□□ 1.28
ERBB2-211ENST00000582648 E9PSI1 815 aa23.07■■□□□ 1.28
ERBB2-211ENST00000582648 LMNB1P20700 586 aa23.07■■□□□ 1.28
ERBB2-211ENST00000582648 FKBP5Q13451 457 aaPredicted RBP23.07■■□□□ 1.28
ERBB2-211ENST00000582648 SOGA3Q5TF21 947 aa23.07■■□□□ 1.28
ERBB2-211ENST00000582648 C7orf43Q8WVR3 580 aa23.07■■□□□ 1.28
ERBB2-211ENST00000582648 CDCA7LQ96GN5 454 aa23.07■■□□□ 1.28
ERBB2-211ENST00000582648 HOXA10P31260 410 aaPredicted RBP23.06■■□□□ 1.28
ERBB2-211ENST00000582648 TRIM28Q13263 835 aaKnown RBP23.06■■□□□ 1.28
ERBB2-211ENST00000582648 DICER1Q9UPY3 1922 aaKnown RBP23.06■■□□□ 1.28
ERBB2-211ENST00000582648 ABCC4O15439 1325 aa23.06■■□□□ 1.28
ERBB2-211ENST00000582648 PPEF1O14829 653 aaPredicted RBP23.05■■□□□ 1.28
ERBB2-211ENST00000582648 JARID2Q92833 1246 aaPredicted RBP23.05■■□□□ 1.28
ERBB2-211ENST00000582648 CWC25Q9NXE8 425 aaPredicted RBP23.05■■□□□ 1.28
ERBB2-211ENST00000582648 SLFN5Q08AF3 891 aa23.04■■□□□ 1.28
ERBB2-211ENST00000582648 NEXNQ0ZGT2 675 aa23.04■■□□□ 1.28
ERBB2-211ENST00000582648 CCDC191Q8NCU4 936 aa23.04■■□□□ 1.28
ERBB2-211ENST00000582648 CRAMP1Q96RY5 1269 aa23.04■■□□□ 1.28
ERBB2-211ENST00000582648 IRS4O14654 1257 aaPredicted RBP23.03■■□□□ 1.28
ERBB2-211ENST00000582648 IGKV5-2P06315 115 aa23.03■■□□□ 1.28
ERBB2-211ENST00000582648 CWF19L2Q2TBE0 894 aaKnown RBP23.03■■□□□ 1.28
ERBB2-211ENST00000582648 ZBTB38Q8NAP3 1195 aaPredicted RBP23.03■■□□□ 1.28
ERBB2-211ENST00000582648 LTBP3Q9NS15 1303 aa23.03■■□□□ 1.28
ERBB2-211ENST00000582648 COL4A1P02462 1669 aa23.01■■□□□ 1.27
ERBB2-211ENST00000582648 DDX46Q7L014 1031 aaKnown RBP23.01■■□□□ 1.27
ERBB2-211ENST00000582648 DNAAF4Q8WXU2 420 aa23.01■■□□□ 1.27
ERBB2-211ENST00000582648 SNED1Q8TER0 1413 aa23■■□□□ 1.27
ERBB2-211ENST00000582648 PCCAP05165 728 aaPredicted RBP23■■□□□ 1.27
ERBB2-211ENST00000582648 FKBP4Q02790 459 aaKnown RBP eCLIP23■■□□□ 1.27
ERBB2-211ENST00000582648 ZNF277Q9NRM2 450 aaPredicted RBP23■■□□□ 1.27
ERBB2-211ENST00000582648 NEURL1BA8MQ27 555 aa22.99■■□□□ 1.27
ERBB2-211ENST00000582648 F6X3S4 739 aa22.99■■□□□ 1.27
ERBB2-211ENST00000582648 RTKN2Q8IZC4 609 aa22.99■■□□□ 1.27
ERBB2-211ENST00000582648 MYH3P11055 1940 aa22.98■■□□□ 1.27
ERBB2-211ENST00000582648 GRAPQ13588 217 aa22.98■■□□□ 1.27
ERBB2-211ENST00000582648 GRAPLQ8TC17 118 aaPredicted RBP22.98■■□□□ 1.27
ERBB2-211ENST00000582648 CCDC85AQ96PX6 553 aaPredicted RBP22.97■■□□□ 1.27
ERBB2-211ENST00000582648 BCL2L13Q9BXK5 485 aa22.97■■□□□ 1.27
ERBB2-211ENST00000582648 NMRK2Q9NPI5 230 aa22.97■■□□□ 1.27
ERBB2-211ENST00000582648 ZC3H4Q9UPT8 1303 aaKnown RBP22.97■■□□□ 1.27
ERBB2-211ENST00000582648 HNRNPUQ00839 825 aaKnown RBP eCLIP22.96■■□□□ 1.27
ERBB2-211ENST00000582648 SF3B3Q15393 1217 aaKnown RBP22.96■■□□□ 1.27
ERBB2-211ENST00000582648 LRRC37AA6NMS7 1700 aa22.96■■□□□ 1.27
ERBB2-211ENST00000582648 CC2D2BQ6DHV5 1058 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms