RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 ZNF827Q17R98 1081 aa18.03■□□□□ 0.48
MKS1-211ENST00000581761 KIF6Q6ZMV9 814 aa18.03■□□□□ 0.48
MKS1-211ENST00000581761 RHPN1Q8TCX5 695 aa18.03■□□□□ 0.48
MKS1-211ENST00000581761 KIF1BPQ96EK5 621 aa18.03■□□□□ 0.48
MKS1-211ENST00000581761 A0A087WZG4 1122 aa18.02■□□□□ 0.48
MKS1-211ENST00000581761 LOC102724428A0A0B4J2F2 783 aa18.02■□□□□ 0.48
MKS1-211ENST00000581761 SIK1P57059 783 aa18.02■□□□□ 0.48
MKS1-211ENST00000581761 JARID2Q92833 1246 aaPredicted RBP18.02■□□□□ 0.48
MKS1-211ENST00000581761 AKT1S1Q96B36 256 aa18.02■□□□□ 0.48
MKS1-211ENST00000581761 OSBPL3Q9H4L5 887 aa18.02■□□□□ 0.48
MKS1-211ENST00000581761 CWC25Q9NXE8 425 aaPredicted RBP18.02■□□□□ 0.48
MKS1-211ENST00000581761 STK32BQ9NY57 414 aa18.02■□□□□ 0.48
MKS1-211ENST00000581761 SALL3Q9BXA9 1300 aa18.01■□□□□ 0.47
MKS1-211ENST00000581761 TJP1Q07157 1748 aa18.01■□□□□ 0.47
MKS1-211ENST00000581761 CYP19A1P11511 503 aaPredicted RBP18.01■□□□□ 0.47
MKS1-211ENST00000581761 MX1P20591 662 aa18.01■□□□□ 0.47
MKS1-211ENST00000581761 ITPK1Q13572 414 aa18.01■□□□□ 0.47
MKS1-211ENST00000581761 SLC15A2Q16348 729 aa18.01■□□□□ 0.47
MKS1-211ENST00000581761 TBC1D9Q6ZT07 1266 aa18.01■□□□□ 0.47
MKS1-211ENST00000581761 UBE3BQ7Z3V4 1068 aa18.01■□□□□ 0.47
MKS1-211ENST00000581761 TBC1D32Q96NH3 1257 aa18.01■□□□□ 0.47
MKS1-211ENST00000581761 PDGFDQ9GZP0 370 aaPredicted RBP18.01■□□□□ 0.47
MKS1-211ENST00000581761 IL1RAPL2Q9NP60 686 aa18.01■□□□□ 0.47
MKS1-211ENST00000581761 COL15A1P39059 1388 aa18.01■□□□□ 0.47
MKS1-211ENST00000581761 EPHA10Q5JZY3 1008 aa18■□□□□ 0.47
MKS1-211ENST00000581761 ERC1Q8IUD2 1116 aa18■□□□□ 0.47
MKS1-211ENST00000581761 PA2G4Q9UQ80 394 aaKnown RBP18■□□□□ 0.47
MKS1-211ENST00000581761 CCDC191Q8NCU4 936 aa17.99■□□□□ 0.47
MKS1-211ENST00000581761 ZBTB1Q9Y2K1 713 aa17.99■□□□□ 0.47
MKS1-211ENST00000581761 AOX1Q06278 1338 aa17.98■□□□□ 0.47
MKS1-211ENST00000581761 H7C1W4 665 aa17.98■□□□□ 0.47
MKS1-211ENST00000581761 EIF5BO60841 1220 aaKnown RBP17.98■□□□□ 0.47
MKS1-211ENST00000581761 SDSP20132 328 aa17.98■□□□□ 0.47
MKS1-211ENST00000581761 ATP6V1AP38606 617 aa17.98■□□□□ 0.47
MKS1-211ENST00000581761 CASP7P55210 303 aa17.98■□□□□ 0.47
MKS1-211ENST00000581761 G3BP1Q13283 466 aaKnown RBP eCLIP17.98■□□□□ 0.47
MKS1-211ENST00000581761 TCIRG1Q13488 830 aa17.98■□□□□ 0.47
MKS1-211ENST00000581761 LINC00116Q8NCU8 138 aa17.98■□□□□ 0.47
MKS1-211ENST00000581761 ARXQ96QS3 562 aa17.98■□□□□ 0.47
MKS1-211ENST00000581761 ISCA1Q9BUE6 129 aa17.98■□□□□ 0.47
MKS1-211ENST00000581761 C22orf23Q9BZE7 217 aa17.98■□□□□ 0.47
MKS1-211ENST00000581761 SPON1Q9HCB6 807 aa17.98■□□□□ 0.47
MKS1-211ENST00000581761 STAP2Q9UGK3 403 aa17.98■□□□□ 0.47
MKS1-211ENST00000581761 TSHZ3Q63HK5 1081 aa17.97■□□□□ 0.47
MKS1-211ENST00000581761 NUTM1Q86Y26 1132 aa17.97■□□□□ 0.47
MKS1-211ENST00000581761 MAP3K15Q6ZN16 1313 aa17.97■□□□□ 0.47
MKS1-211ENST00000581761 RABL6Q3YEC7 729 aaPredicted RBP17.96■□□□□ 0.47
MKS1-211ENST00000581761 CASC1Q6TDU7 716 aa17.96■□□□□ 0.47
MKS1-211ENST00000581761 AMIGO3Q86WK7 504 aa17.96■□□□□ 0.47
MKS1-211ENST00000581761 PPP1R1BQ9UD71 204 aaPredicted RBP17.96■□□□□ 0.47
MKS1-211ENST00000581761 ZBTB7AO95365 584 aa17.95■□□□□ 0.46
MKS1-211ENST00000581761 IL6STP40189 918 aaPredicted RBP17.95■□□□□ 0.46
MKS1-211ENST00000581761 DAXXQ9UER7 740 aaPredicted RBP17.95■□□□□ 0.46
MKS1-211ENST00000581761 HSP90AB3PQ58FF7 597 aa17.94■□□□□ 0.46
MKS1-211ENST00000581761 SMIM5Q71RC9 77 aa17.94■□□□□ 0.46
MKS1-211ENST00000581761 CLASRPQ8N2M8 674 aaKnown RBP17.94■□□□□ 0.46
MKS1-211ENST00000581761 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
MKS1-211ENST00000581761 PNPLA7Q6ZV29 1317 aa17.94■□□□□ 0.46
MKS1-211ENST00000581761 CASZ1Q86V15 1759 aa17.94■□□□□ 0.46
MKS1-211ENST00000581761 RFX5P48382 616 aaPredicted RBP17.93■□□□□ 0.46
MKS1-211ENST00000581761 TRIM28Q13263 835 aaKnown RBP17.93■□□□□ 0.46
MKS1-211ENST00000581761 RTL5Q5HYW3 569 aaPredicted RBP17.93■□□□□ 0.46
MKS1-211ENST00000581761 GIGYF2Q6Y7W6 1299 aaKnown RBP17.93■□□□□ 0.46
MKS1-211ENST00000581761 SIL1Q9H173 461 aa17.93■□□□□ 0.46
MKS1-211ENST00000581761 COPRSQ9NQ92 184 aa17.93■□□□□ 0.46
MKS1-211ENST00000581761 TAF1LQ8IZX4 1826 aa17.93■□□□□ 0.46
MKS1-211ENST00000581761 CICQ96RK0 1608 aaPredicted RBP17.92■□□□□ 0.46
MKS1-211ENST00000581761 FOXO4P98177 505 aa17.92■□□□□ 0.46
MKS1-211ENST00000581761 LMBR1LQ6UX01 489 aa17.92■□□□□ 0.46
MKS1-211ENST00000581761 KLHDC4Q8TBB5 520 aa17.92■□□□□ 0.46
MKS1-211ENST00000581761 TFCP2L1Q9NZI6 479 aa17.92■□□□□ 0.46
MKS1-211ENST00000581761 CHMP3Q9Y3E7 222 aa17.92■□□□□ 0.46
MKS1-211ENST00000581761 C4BP0C0L5 1744 aa17.92■□□□□ 0.46
MKS1-211ENST00000581761 TRIM6-TRIM34B2RNG4 842 aa17.91■□□□□ 0.46
MKS1-211ENST00000581761 SASH1O94885 1247 aa17.91■□□□□ 0.46
MKS1-211ENST00000581761 IFIT2P09913 472 aaKnown RBP17.91■□□□□ 0.46
MKS1-211ENST00000581761 CRKLP46109 303 aaKnown RBP17.91■□□□□ 0.46
MKS1-211ENST00000581761 BECN1Q14457 450 aa17.91■□□□□ 0.46
MKS1-211ENST00000581761 HLFQ16534 295 aa17.91■□□□□ 0.46
MKS1-211ENST00000581761 INTS5Q6P9B9 1019 aaKnown RBP17.91■□□□□ 0.46
MKS1-211ENST00000581761 AACSQ86V21 672 aa17.91■□□□□ 0.46
MKS1-211ENST00000581761 DZIP3Q86Y13 1208 aaKnown RBP17.91■□□□□ 0.46
MKS1-211ENST00000581761 GPATCH3Q96I76 525 aa17.91■□□□□ 0.46
MKS1-211ENST00000581761 ATF5Q9Y2D1 282 aaPredicted RBP17.91■□□□□ 0.46
MKS1-211ENST00000581761 USP42Q9H9J4 1324 aaKnown RBP17.91■□□□□ 0.46
MKS1-211ENST00000581761 ZNF831Q5JPB2 1677 aa17.9■□□□□ 0.46
MKS1-211ENST00000581761 ERVV-1B6SEH8 477 aa17.9■□□□□ 0.46
MKS1-211ENST00000581761 PCCAP05165 728 aaPredicted RBP17.9■□□□□ 0.46
MKS1-211ENST00000581761 PTPN12Q05209 780 aaKnown RBP17.9■□□□□ 0.46
MKS1-211ENST00000581761 COL23A1Q86Y22 540 aaPredicted RBP17.9■□□□□ 0.46
MKS1-211ENST00000581761 PI4K2BQ8TCG2 481 aa17.9■□□□□ 0.46
MKS1-211ENST00000581761 RILPL2Q969X0 211 aa17.9■□□□□ 0.46
MKS1-211ENST00000581761 TUBGCP6Q96RT7 1819 aa17.9■□□□□ 0.46
MKS1-211ENST00000581761 TTC41PQ6P2S7 1318 aa17.9■□□□□ 0.46
MKS1-211ENST00000581761 GPTP24298 496 aa17.89■□□□□ 0.45
MKS1-211ENST00000581761 SLC4A3P48751 1232 aa17.89■□□□□ 0.45
MKS1-211ENST00000581761 RBM25P49756 843 aaKnown RBP17.89■□□□□ 0.45
MKS1-211ENST00000581761 EIF5P55010 431 aaKnown RBP17.89■□□□□ 0.45
MKS1-211ENST00000581761 TBC1D2BQ9UPU7 963 aa17.89■□□□□ 0.45
MKS1-211ENST00000581761 ERC2O15083 957 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms