RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 SCN4AP35499 1836 aa13.78□□□□□ -0.2
SUPT4H1-204ENST00000580947 CALD1Q05682 793 aaKnown RBP13.78□□□□□ -0.2
SUPT4H1-204ENST00000580947 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
SUPT4H1-204ENST00000580947 PARP10Q53GL7 1025 aa13.78□□□□□ -0.2
SUPT4H1-204ENST00000580947 SLC10A5Q5PT55 438 aa13.78□□□□□ -0.2
SUPT4H1-204ENST00000580947 NLRP10Q86W26 655 aa13.78□□□□□ -0.2
SUPT4H1-204ENST00000580947 C8orf58Q8NAV2 365 aa13.78□□□□□ -0.2
SUPT4H1-204ENST00000580947 TAOK3Q9H2K8 898 aa13.78□□□□□ -0.2
SUPT4H1-204ENST00000580947 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
SUPT4H1-204ENST00000580947 DBF4Q9UBU7 674 aaPredicted RBP13.78□□□□□ -0.2
SUPT4H1-204ENST00000580947 COL4A1P02462 1669 aa13.78□□□□□ -0.2
SUPT4H1-204ENST00000580947 COL4A5P29400 1685 aa13.78□□□□□ -0.2
SUPT4H1-204ENST00000580947 ANP32CO43423 234 aa13.77□□□□□ -0.21
SUPT4H1-204ENST00000580947 MYH3P11055 1940 aa13.77□□□□□ -0.21
SUPT4H1-204ENST00000580947 AIMP1Q12904 312 aaKnown RBP13.77□□□□□ -0.21
SUPT4H1-204ENST00000580947 TCIRG1Q13488 830 aa13.77□□□□□ -0.21
SUPT4H1-204ENST00000580947 SOGA3Q5TF21 947 aa13.77□□□□□ -0.21
SUPT4H1-204ENST00000580947 RNF123Q5XPI4 1314 aa13.77□□□□□ -0.21
SUPT4H1-204ENST00000580947 SLC51AQ86UW1 340 aa13.77□□□□□ -0.21
SUPT4H1-204ENST00000580947 WWC1Q8IX03 1113 aa13.77□□□□□ -0.21
SUPT4H1-204ENST00000580947 KDM2BQ8NHM5 1336 aa13.77□□□□□ -0.21
SUPT4H1-204ENST00000580947 PCNTO95613 3336 aa13.76□□□□□ -0.21
SUPT4H1-204ENST00000580947 GLTPD2A6NH11 291 aa13.76□□□□□ -0.21
SUPT4H1-204ENST00000580947 TOMM70O94826 608 aa13.76□□□□□ -0.21
SUPT4H1-204ENST00000580947 GTF2E1P29083 439 aaPredicted RBP13.76□□□□□ -0.21
SUPT4H1-204ENST00000580947 CCDC93Q567U6 631 aa13.76□□□□□ -0.21
SUPT4H1-204ENST00000580947 HSP90AB3PQ58FF7 597 aa13.76□□□□□ -0.21
SUPT4H1-204ENST00000580947 PPP1R42Q7Z4L9 355 aa13.76□□□□□ -0.21
SUPT4H1-204ENST00000580947 PLBD2Q8NHP8 589 aa13.76□□□□□ -0.21
SUPT4H1-204ENST00000580947 ISCA1Q9BUE6 129 aa13.76□□□□□ -0.21
SUPT4H1-204ENST00000580947 UTP14AQ9BVJ6 771 aaKnown RBP13.76□□□□□ -0.21
SUPT4H1-204ENST00000580947 LTBP1Q14766 1721 aa13.76□□□□□ -0.21
SUPT4H1-204ENST00000580947 POTECB2RU33 542 aa13.75□□□□□ -0.21
SUPT4H1-204ENST00000580947 ALDH1B1P30837 517 aa13.75□□□□□ -0.21
SUPT4H1-204ENST00000580947 SYNE4Q8N205 404 aa13.75□□□□□ -0.21
SUPT4H1-204ENST00000580947 TSPYL6Q8N831 410 aa13.75□□□□□ -0.21
SUPT4H1-204ENST00000580947 HYPKQ9NX55 129 aa13.75□□□□□ -0.21
SUPT4H1-204ENST00000580947 IL16Q14005 1332 aa13.74□□□□□ -0.21
SUPT4H1-204ENST00000580947 ELL2O00472 640 aaPredicted RBP13.74□□□□□ -0.21
SUPT4H1-204ENST00000580947 FKBP4Q02790 459 aaKnown RBP eCLIP13.74□□□□□ -0.21
SUPT4H1-204ENST00000580947 ANKRD13DQ6ZTN6 518 aa13.74□□□□□ -0.21
SUPT4H1-204ENST00000580947 TSR2Q969E8 191 aaKnown RBP13.74□□□□□ -0.21
SUPT4H1-204ENST00000580947 CRAMP1Q96RY5 1269 aa13.74□□□□□ -0.21
SUPT4H1-204ENST00000580947 RRAGCQ9HB90 399 aa13.74□□□□□ -0.21
SUPT4H1-204ENST00000580947 HSPA6P17066 643 aa13.73□□□□□ -0.21
SUPT4H1-204ENST00000580947 RBM46Q8TBY0 533 aaKnown RBP13.73□□□□□ -0.21
SUPT4H1-204ENST00000580947 PHAXQ9H814 394 aaKnown RBP13.73□□□□□ -0.21
SUPT4H1-204ENST00000580947 ADAMTSL1Q8N6G6 1762 aa13.73□□□□□ -0.21
SUPT4H1-204ENST00000580947 ABCC4O15439 1325 aa13.72□□□□□ -0.21
SUPT4H1-204ENST00000580947 DUOX1Q9NRD9 1551 aa13.72□□□□□ -0.21
SUPT4H1-204ENST00000580947 TRIM28Q13263 835 aaKnown RBP13.72□□□□□ -0.21
SUPT4H1-204ENST00000580947 RTKN2Q8IZC4 609 aa13.72□□□□□ -0.21
SUPT4H1-204ENST00000580947 RPGRQ92834 1020 aaKnown RBP13.72□□□□□ -0.21
SUPT4H1-204ENST00000580947 ZNF277Q9NRM2 450 aaPredicted RBP13.72□□□□□ -0.21
SUPT4H1-204ENST00000580947 SH3TC1Q8TE82 1336 aa13.71□□□□□ -0.21
SUPT4H1-204ENST00000580947 ATP5J2-PTCD1G3V325 749 aa13.71□□□□□ -0.21
SUPT4H1-204ENST00000580947 HCLS1P14317 486 aaPredicted RBP13.71□□□□□ -0.21
SUPT4H1-204ENST00000580947 RBM17Q96I25 401 aaKnown RBP13.71□□□□□ -0.21
SUPT4H1-204ENST00000580947 NLRP3Q96P20 1036 aa13.71□□□□□ -0.21
SUPT4H1-204ENST00000580947 PSMD1Q99460 953 aa13.71□□□□□ -0.21
SUPT4H1-204ENST00000580947 TRMT112Q9UI30 125 aaKnown RBP13.71□□□□□ -0.21
SUPT4H1-204ENST00000580947 SPEF2Q9C093 1822 aa13.71□□□□□ -0.22
SUPT4H1-204ENST00000580947 VEGFAP15692 232 aaPredicted RBP13.7□□□□□ -0.22
SUPT4H1-204ENST00000580947 CC2D2BQ6DHV5 1058 aa13.7□□□□□ -0.22
SUPT4H1-204ENST00000580947 ZNF428Q96B54 188 aa13.7□□□□□ -0.22
SUPT4H1-204ENST00000580947 ZNF541Q9H0D2 1346 aa13.69□□□□□ -0.22
SUPT4H1-204ENST00000580947 FANCIQ9NVI1 1328 aa13.69□□□□□ -0.22
SUPT4H1-204ENST00000580947 PPEF1O14829 653 aaPredicted RBP13.69□□□□□ -0.22
SUPT4H1-204ENST00000580947 IARSP41252 1262 aaKnown RBP13.69□□□□□ -0.22
SUPT4H1-204ENST00000580947 CCDC30Q5VVM6 783 aa13.69□□□□□ -0.22
SUPT4H1-204ENST00000580947 FZD9O00144 591 aa13.68□□□□□ -0.22
SUPT4H1-204ENST00000580947 DDNO94850 711 aaPredicted RBP13.68□□□□□ -0.22
SUPT4H1-204ENST00000580947 FSTL1Q12841 308 aa13.68□□□□□ -0.22
SUPT4H1-204ENST00000580947 WDR63Q8IWG1 891 aa13.68□□□□□ -0.22
SUPT4H1-204ENST00000580947 FAM89AQ96GI7 184 aa13.68□□□□□ -0.22
SUPT4H1-204ENST00000580947 L3MBTL3Q96JM7 780 aaPredicted RBP13.68□□□□□ -0.22
SUPT4H1-204ENST00000580947 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
SUPT4H1-204ENST00000580947 ATP6V0A2Q9Y487 856 aa13.68□□□□□ -0.22
SUPT4H1-204ENST00000580947 ZNF521Q96K83 1311 aa13.67□□□□□ -0.22
SUPT4H1-204ENST00000580947 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
SUPT4H1-204ENST00000580947 SF3B3Q15393 1217 aaKnown RBP13.67□□□□□ -0.22
SUPT4H1-204ENST00000580947 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
SUPT4H1-204ENST00000580947 GRIPAP1Q4V328 841 aa13.67□□□□□ -0.22
SUPT4H1-204ENST00000580947 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
SUPT4H1-204ENST00000580947 SCN9AQ15858 1988 aa13.67□□□□□ -0.22
SUPT4H1-204ENST00000580947 PSME4Q14997 1843 aa13.67□□□□□ -0.22
SUPT4H1-204ENST00000580947 G2E3Q7L622 706 aa13.66□□□□□ -0.22
SUPT4H1-204ENST00000580947 RIC3Q7Z5B4 369 aa13.66□□□□□ -0.22
SUPT4H1-204ENST00000580947 C16orf71Q8IYS4 520 aaPredicted RBP13.66□□□□□ -0.22
SUPT4H1-204ENST00000580947 METTL22Q9BUU2 404 aaPredicted RBP13.66□□□□□ -0.22
SUPT4H1-204ENST00000580947 RTFDC1Q9BY42 306 aaPredicted RBP13.66□□□□□ -0.22
SUPT4H1-204ENST00000580947 TCERG1O14776 1098 aaKnown RBP13.65□□□□□ -0.22
SUPT4H1-204ENST00000580947 BBOX1O75936 387 aa13.65□□□□□ -0.22
SUPT4H1-204ENST00000580947 IGKV5-2P06315 115 aa13.65□□□□□ -0.22
SUPT4H1-204ENST00000580947 GRAPQ13588 217 aa13.65□□□□□ -0.22
SUPT4H1-204ENST00000580947 SP8Q8IXZ3 490 aa13.65□□□□□ -0.22
SUPT4H1-204ENST00000580947 ZBTB38Q8NAP3 1195 aaPredicted RBP13.65□□□□□ -0.22
SUPT4H1-204ENST00000580947 GRAPLQ8TC17 118 aaPredicted RBP13.65□□□□□ -0.22
SUPT4H1-204ENST00000580947 MYD88Q99836 296 aa13.65□□□□□ -0.22
SUPT4H1-204ENST00000580947 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms