RNA–Protein interactions for RNA: ENST00000579954.1

SSH2-209, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 3 BASIC

Gene SSH2, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-209ENST00000579954 ABCC12Q96J65 1359 aa11.66□□□□□ -0.54
SSH2-209ENST00000579954 UTRNP46939 3433 aa11.65□□□□□ -0.54
SSH2-209ENST00000579954 ATP5J2-PTCD1G3V325 749 aa11.65□□□□□ -0.54
SSH2-209ENST00000579954 TCIRG1Q13488 830 aa11.65□□□□□ -0.54
SSH2-209ENST00000579954 ZNF526Q8TF50 670 aaPredicted RBP11.65□□□□□ -0.54
SSH2-209ENST00000579954 RPGRQ92834 1020 aaKnown RBP11.65□□□□□ -0.54
SSH2-209ENST00000579954 MASTLQ96GX5 879 aa11.65□□□□□ -0.54
SSH2-209ENST00000579954 SBF1O95248 1867 aa11.65□□□□□ -0.54
SSH2-209ENST00000579954 IBTKQ9P2D0 1353 aaPredicted RBP11.65□□□□□ -0.55
SSH2-209ENST00000579954 TIAM2Q8IVF5 1701 aa11.64□□□□□ -0.55
SSH2-209ENST00000579954 DDX60Q8IY21 1712 aaKnown RBP11.64□□□□□ -0.55
SSH2-209ENST00000579954 C21orf2O43822 256 aa11.64□□□□□ -0.55
SSH2-209ENST00000579954 NTSR2O95665 410 aa11.64□□□□□ -0.55
SSH2-209ENST00000579954 SRGNP10124 158 aa11.64□□□□□ -0.55
SSH2-209ENST00000579954 CNKSR1Q969H4 720 aa11.64□□□□□ -0.55
SSH2-209ENST00000579954 MYD88Q99836 296 aa11.64□□□□□ -0.55
SSH2-209ENST00000579954 SPINK5Q9NQ38 1064 aaPredicted RBP11.64□□□□□ -0.55
SSH2-209ENST00000579954 TRMT112Q9UI30 125 aaKnown RBP11.64□□□□□ -0.55
SSH2-209ENST00000579954 SLC4A2P04920 1241 aa11.63□□□□□ -0.55
SSH2-209ENST00000579954 RTL5Q5HYW3 569 aaPredicted RBP11.63□□□□□ -0.55
SSH2-209ENST00000579954 STYK1Q6J9G0 422 aa11.63□□□□□ -0.55
SSH2-209ENST00000579954 PRPF40BQ6NWY9 871 aaKnown RBP11.63□□□□□ -0.55
SSH2-209ENST00000579954 TAF1P21675 1872 aa11.63□□□□□ -0.55
SSH2-209ENST00000579954 FER1L6Q2WGJ9 1857 aa11.63□□□□□ -0.55
SSH2-209ENST00000579954 NPR1P16066 1061 aa11.62□□□□□ -0.55
SSH2-209ENST00000579954 RASSF7Q02833 373 aa11.62□□□□□ -0.55
SSH2-209ENST00000579954 FKBP5Q13451 457 aaPredicted RBP11.62□□□□□ -0.55
SSH2-209ENST00000579954 NLRP10Q86W26 655 aa11.62□□□□□ -0.55
SSH2-209ENST00000579954 RNF181Q9P0P0 153 aa11.62□□□□□ -0.55
SSH2-209ENST00000579954 MAP3K2Q9Y2U5 619 aa11.62□□□□□ -0.55
SSH2-209ENST00000579954 SH3TC1Q8TE82 1336 aa11.61□□□□□ -0.55
SSH2-209ENST00000579954 MYH3P11055 1940 aa11.61□□□□□ -0.55
SSH2-209ENST00000579954 E9PSI1 815 aa11.61□□□□□ -0.55
SSH2-209ENST00000579954 NEXNQ0ZGT2 675 aa11.61□□□□□ -0.55
SSH2-209ENST00000579954 MAPK8IP2Q13387 824 aaPredicted RBP11.61□□□□□ -0.55
SSH2-209ENST00000579954 ZNF784Q8NCA9 323 aaPredicted RBP11.61□□□□□ -0.55
SSH2-209ENST00000579954 NLRP3Q96P20 1036 aa11.61□□□□□ -0.55
SSH2-209ENST00000579954 SPEF2Q9C093 1822 aa11.6□□□□□ -0.55
SSH2-209ENST00000579954 DICER1Q9UPY3 1922 aaKnown RBP11.6□□□□□ -0.55
SSH2-209ENST00000579954 PI4KAP2A4QPH2 592 aa11.6□□□□□ -0.55
SSH2-209ENST00000579954 VAMP4O75379 141 aa11.6□□□□□ -0.55
SSH2-209ENST00000579954 HCLS1P14317 486 aaPredicted RBP11.6□□□□□ -0.55
SSH2-209ENST00000579954 ALDH1B1P30837 517 aa11.6□□□□□ -0.55
SSH2-209ENST00000579954 C9orf131Q5VYM1 1079 aa11.6□□□□□ -0.55
SSH2-209ENST00000579954 G2E3Q7L622 706 aa11.6□□□□□ -0.55
SSH2-209ENST00000579954 SYNE4Q8N205 404 aa11.6□□□□□ -0.55
SSH2-209ENST00000579954 PI4KAP1Q8N8J0 262 aa11.6□□□□□ -0.55
SSH2-209ENST00000579954 FAM89AQ96GI7 184 aa11.6□□□□□ -0.55
SSH2-209ENST00000579954 RBM17Q96I25 401 aaKnown RBP11.6□□□□□ -0.55
SSH2-209ENST00000579954 RIC1Q4ADV7 1423 aa11.6□□□□□ -0.55
SSH2-209ENST00000579954 RNF123Q5XPI4 1314 aa11.6□□□□□ -0.55
SSH2-209ENST00000579954 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
SSH2-209ENST00000579954 HNRNPUQ00839 825 aaKnown RBP eCLIP11.59□□□□□ -0.55
SSH2-209ENST00000579954 FLIIQ13045 1269 aa11.59□□□□□ -0.55
SSH2-209ENST00000579954 SOGA3Q5TF21 947 aa11.59□□□□□ -0.55
SSH2-209ENST00000579954 KSR2Q6VAB6 950 aa11.59□□□□□ -0.55
SSH2-209ENST00000579954 C3orf67Q6ZVT6 689 aa11.59□□□□□ -0.55
SSH2-209ENST00000579954 CDCA7LQ96GN5 454 aa11.59□□□□□ -0.55
SSH2-209ENST00000579954 ISCA1Q9BUE6 129 aa11.59□□□□□ -0.55
SSH2-209ENST00000579954 TMX4Q9H1E5 349 aaPredicted RBP11.59□□□□□ -0.55
SSH2-209ENST00000579954 CWC25Q9NXE8 425 aaPredicted RBP11.59□□□□□ -0.55
SSH2-209ENST00000579954 ADCY9O60503 1353 aa11.58□□□□□ -0.56
SSH2-209ENST00000579954 PPEF1O14829 653 aaPredicted RBP11.58□□□□□ -0.56
SSH2-209ENST00000579954 CCDC93Q567U6 631 aa11.58□□□□□ -0.56
SSH2-209ENST00000579954 JARID2Q92833 1246 aaPredicted RBP11.58□□□□□ -0.56
SSH2-209ENST00000579954 METTL22Q9BUU2 404 aaPredicted RBP11.58□□□□□ -0.56
SSH2-209ENST00000579954 TAOK3Q9H2K8 898 aa11.58□□□□□ -0.56
SSH2-209ENST00000579954 GPBP1L1Q9HC44 474 aaPredicted RBP11.58□□□□□ -0.56
SSH2-209ENST00000579954 IRS4O14654 1257 aaPredicted RBP11.57□□□□□ -0.56
SSH2-209ENST00000579954 LMNB1P20700 586 aa11.57□□□□□ -0.56
SSH2-209ENST00000579954 SLFN5Q08AF3 891 aa11.57□□□□□ -0.56
SSH2-209ENST00000579954 OLFM4Q6UX06 510 aa11.57□□□□□ -0.56
SSH2-209ENST00000579954 DDX46Q7L014 1031 aaKnown RBP11.57□□□□□ -0.56
SSH2-209ENST00000579954 CCDC191Q8NCU4 936 aa11.57□□□□□ -0.56
SSH2-209ENST00000579954 KLRG2A4D1S0 409 aaPredicted RBP11.56□□□□□ -0.56
SSH2-209ENST00000579954 CWF19L2Q2TBE0 894 aaKnown RBP11.56□□□□□ -0.56
SSH2-209ENST00000579954 CRY2Q49AN0 593 aa11.56□□□□□ -0.56
SSH2-209ENST00000579954 SLC4A10Q6U841 1118 aa11.56□□□□□ -0.56
SSH2-209ENST00000579954 ZBTB38Q8NAP3 1195 aaPredicted RBP11.56□□□□□ -0.56
SSH2-209ENST00000579954 BCL2L13Q9BXK5 485 aa11.56□□□□□ -0.56
SSH2-209ENST00000579954 ABCC4O15439 1325 aa11.56□□□□□ -0.56
SSH2-209ENST00000579954 F6X3S4 739 aa11.55□□□□□ -0.56
SSH2-209ENST00000579954 NFKBIEO00221 500 aa11.55□□□□□ -0.56
SSH2-209ENST00000579954 HSP90B1P14625 803 aaKnown RBP11.55□□□□□ -0.56
SSH2-209ENST00000579954 SLC10A5Q5PT55 438 aa11.55□□□□□ -0.56
SSH2-209ENST00000579954 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
SSH2-209ENST00000579954 DNAAF4Q8WXU2 420 aa11.55□□□□□ -0.56
SSH2-209ENST00000579954 CCDC85AQ96PX6 553 aaPredicted RBP11.55□□□□□ -0.56
SSH2-209ENST00000579954 CRAMP1Q96RY5 1269 aa11.55□□□□□ -0.56
SSH2-209ENST00000579954 NEURL1BA8MQ27 555 aa11.54□□□□□ -0.56
SSH2-209ENST00000579954 PCCAP05165 728 aaPredicted RBP11.54□□□□□ -0.56
SSH2-209ENST00000579954 HOXA10P31260 410 aaPredicted RBP11.54□□□□□ -0.56
SSH2-209ENST00000579954 FKBP4Q02790 459 aaKnown RBP eCLIP11.54□□□□□ -0.56
SSH2-209ENST00000579954 SMC4Q9NTJ3 1288 aa11.54□□□□□ -0.56
SSH2-209ENST00000579954 IGKV5-2P06315 115 aa11.53□□□□□ -0.56
SSH2-209ENST00000579954 TRIM28Q13263 835 aaKnown RBP11.53□□□□□ -0.56
SSH2-209ENST00000579954 GRAPQ13588 217 aa11.53□□□□□ -0.56
SSH2-209ENST00000579954 UBE3BQ7Z3V4 1068 aa11.53□□□□□ -0.56
SSH2-209ENST00000579954 GRAPLQ8TC17 118 aaPredicted RBP11.53□□□□□ -0.56
SSH2-209ENST00000579954 ZNF277Q9NRM2 450 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms