RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 GJA3Q9Y6H8 435 aa16.3■□□□□ 0.2
CDK5RAP3-216ENST00000579853 PDE4DIPQ5VU43 2346 aa16.3■□□□□ 0.2
CDK5RAP3-216ENST00000579853 PRAMEF22A3QJZ6 481 aa16.29■□□□□ 0.2
CDK5RAP3-216ENST00000579853 NBPF26B4DH59 902 aa16.29■□□□□ 0.2
CDK5RAP3-216ENST00000579853 HTATSF1O43719 755 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-216ENST00000579853 NBPF10Q6P3W6 841 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-216ENST00000579853 PAXIP1Q6ZW49 1069 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-216ENST00000579853 NBPF15Q8N660 670 aa16.29■□□□□ 0.2
CDK5RAP3-216ENST00000579853 CAPNS2Q96L46 248 aa16.29■□□□□ 0.2
CDK5RAP3-216ENST00000579853 GPR101Q96P66 508 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-216ENST00000579853 RSPH6AQ9H0K4 717 aa16.29■□□□□ 0.2
CDK5RAP3-216ENST00000579853 ERVV-1B6SEH8 477 aa16.28■□□□□ 0.2
CDK5RAP3-216ENST00000579853 MLLT1Q03111 559 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-216ENST00000579853 LARGE2Q8N3Y3 721 aa16.28■□□□□ 0.2
CDK5RAP3-216ENST00000579853 RPGRQ92834 1020 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-216ENST00000579853 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
CDK5RAP3-216ENST00000579853 CA12O43570 354 aa16.27■□□□□ 0.2
CDK5RAP3-216ENST00000579853 HOXA10P31260 410 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-216ENST00000579853 MAP2K2P36507 400 aa16.27■□□□□ 0.2
CDK5RAP3-216ENST00000579853 HLFQ16534 295 aa16.27■□□□□ 0.2
CDK5RAP3-216ENST00000579853 TMX4Q9H1E5 349 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-216ENST00000579853 RIC1Q4ADV7 1423 aa16.27■□□□□ 0.19
CDK5RAP3-216ENST00000579853 TRPM7Q96QT4 1865 aa16.27■□□□□ 0.19
CDK5RAP3-216ENST00000579853 THSD7BQ9C0I4 1608 aa16.27■□□□□ 0.19
CDK5RAP3-216ENST00000579853 TNRC18O15417 2968 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-216ENST00000579853 RGS19P49795 217 aa16.26■□□□□ 0.19
CDK5RAP3-216ENST00000579853 SCNN1DP51172 638 aa16.26■□□□□ 0.19
CDK5RAP3-216ENST00000579853 TAF7Q15545 349 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-216ENST00000579853 MCM10Q7L590 875 aa16.26■□□□□ 0.19
CDK5RAP3-216ENST00000579853 VPS33BQ9H267 617 aa16.26■□□□□ 0.19
CDK5RAP3-216ENST00000579853 IBTKQ9P2D0 1353 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-216ENST00000579853 CCDC85CA6NKD9 419 aa16.25■□□□□ 0.19
CDK5RAP3-216ENST00000579853 EPS15P42566 896 aa16.25■□□□□ 0.19
CDK5RAP3-216ENST00000579853 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-216ENST00000579853 CRAMP1Q96RY5 1269 aa16.25■□□□□ 0.19
CDK5RAP3-216ENST00000579853 TLL2Q9Y6L7 1015 aa16.25■□□□□ 0.19
CDK5RAP3-216ENST00000579853 U2AF1L5P0DN76 240 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-216ENST00000579853 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.19
CDK5RAP3-216ENST00000579853 CYP4F22Q6NT55 531 aa16.24■□□□□ 0.19
CDK5RAP3-216ENST00000579853 KIF6Q6ZMV9 814 aa16.24■□□□□ 0.19
CDK5RAP3-216ENST00000579853 NIM1KQ8IY84 436 aa16.24■□□□□ 0.19
CDK5RAP3-216ENST00000579853 ADARB2Q9NS39 739 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-216ENST00000579853 MAP3K15Q6ZN16 1313 aa16.23■□□□□ 0.19
CDK5RAP3-216ENST00000579853 GRM1Q13255 1194 aa16.23■□□□□ 0.19
CDK5RAP3-216ENST00000579853 CST9Q5W186 159 aa16.23■□□□□ 0.19
CDK5RAP3-216ENST00000579853 NUTM1Q86Y26 1132 aa16.23■□□□□ 0.19
CDK5RAP3-216ENST00000579853 CCER1Q8TC90 406 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-216ENST00000579853 PNISRQ8TF01 805 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-216ENST00000579853 HHIPL1Q96JK4 782 aa16.23■□□□□ 0.19
CDK5RAP3-216ENST00000579853 ABCC12Q96J65 1359 aa16.23■□□□□ 0.19
CDK5RAP3-216ENST00000579853 NUP98P52948 1817 aa16.22■□□□□ 0.19
CDK5RAP3-216ENST00000579853 PPEF1O14829 653 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-216ENST00000579853 CNGB1Q14028 1251 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-216ENST00000579853 SUPT20HQ8NEM7 779 aa16.22■□□□□ 0.19
CDK5RAP3-216ENST00000579853 PCDH10Q9P2E7 1040 aa16.22■□□□□ 0.19
CDK5RAP3-216ENST00000579853 LAMB4A4D0S4 1761 aa16.22■□□□□ 0.19
CDK5RAP3-216ENST00000579853 LTBP1Q14766 1721 aa16.22■□□□□ 0.19
CDK5RAP3-216ENST00000579853 PPIP5K2O43314 1243 aa16.21■□□□□ 0.19
CDK5RAP3-216ENST00000579853 NEFMP07197 916 aa16.21■□□□□ 0.19
CDK5RAP3-216ENST00000579853 SAPCD2Q86UD0 394 aa16.21■□□□□ 0.19
CDK5RAP3-216ENST00000579853 GPRC5DQ9NZD1 345 aa16.21■□□□□ 0.19
CDK5RAP3-216ENST00000579853 COL4A5P29400 1685 aa16.21■□□□□ 0.18
CDK5RAP3-216ENST00000579853 CDHR2Q9BYE9 1310 aa16.2■□□□□ 0.18
CDK5RAP3-216ENST00000579853 TRAF5O00463 557 aa16.2■□□□□ 0.18
CDK5RAP3-216ENST00000579853 DCTN1Q14203 1278 aa16.2■□□□□ 0.18
CDK5RAP3-216ENST00000579853 NGEFQ8N5V2 710 aa16.2■□□□□ 0.18
CDK5RAP3-216ENST00000579853 BRPF1P55201 1214 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-216ENST00000579853 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.18
CDK5RAP3-216ENST00000579853 PARP10Q53GL7 1025 aa16.19■□□□□ 0.18
CDK5RAP3-216ENST00000579853 PPP1R42Q7Z4L9 355 aa16.19■□□□□ 0.18
CDK5RAP3-216ENST00000579853 ZC3H15Q8WU90 426 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-216ENST00000579853 NLRP3Q96P20 1036 aa16.19■□□□□ 0.18
CDK5RAP3-216ENST00000579853 ZNRF3Q9ULT6 936 aa16.19■□□□□ 0.18
CDK5RAP3-216ENST00000579853 RRP7AQ9Y3A4 280 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-216ENST00000579853 CELF2O95319 508 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-216ENST00000579853 GPTP24298 496 aa16.18■□□□□ 0.18
CDK5RAP3-216ENST00000579853 GIGYF2Q6Y7W6 1299 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-216ENST00000579853 ZNF34Q8IZ26 560 aa16.18■□□□□ 0.18
CDK5RAP3-216ENST00000579853 PGAP2Q9UHJ9 254 aa16.18■□□□□ 0.18
CDK5RAP3-216ENST00000579853 ATP6V0A2Q9Y487 856 aa16.18■□□□□ 0.18
CDK5RAP3-216ENST00000579853 ERBB4Q15303 1308 aa16.18■□□□□ 0.18
CDK5RAP3-216ENST00000579853 AOC2O75106 756 aa16.17■□□□□ 0.18
CDK5RAP3-216ENST00000579853 AOC3Q16853 763 aa16.17■□□□□ 0.18
CDK5RAP3-216ENST00000579853 SUSD4Q5VX71 490 aa16.17■□□□□ 0.18
CDK5RAP3-216ENST00000579853 RTFDC1Q9BY42 306 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-216ENST00000579853 UBN2Q6ZU65 1347 aa16.17■□□□□ 0.18
CDK5RAP3-216ENST00000579853 CASP8AP2Q9UKL3 1982 aa16.17■□□□□ 0.18
CDK5RAP3-216ENST00000579853 TCERG1O14776 1098 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-216ENST00000579853 NTSR2O95665 410 aa16.16■□□□□ 0.18
CDK5RAP3-216ENST00000579853 MYL6BP14649 208 aa16.16■□□□□ 0.18
CDK5RAP3-216ENST00000579853 CXCL9Q07325 125 aa16.16■□□□□ 0.18
CDK5RAP3-216ENST00000579853 NOGQ13253 232 aa16.16■□□□□ 0.18
CDK5RAP3-216ENST00000579853 TNIP1Q15025 636 aa16.16■□□□□ 0.18
CDK5RAP3-216ENST00000579853 TTLL7Q6ZT98 887 aa16.16■□□□□ 0.18
CDK5RAP3-216ENST00000579853 CDC37L1Q7L3B6 337 aa16.16■□□□□ 0.18
CDK5RAP3-216ENST00000579853 MCOLN1Q9GZU1 580 aa16.16■□□□□ 0.18
CDK5RAP3-216ENST00000579853 ZBTB3Q9H5J0 574 aa16.16■□□□□ 0.18
CDK5RAP3-216ENST00000579853 MIS18AQ9NYP9 233 aa16.16■□□□□ 0.18
CDK5RAP3-216ENST00000579853 TSKSQ9UJT2 592 aa16.16■□□□□ 0.18
CDK5RAP3-216ENST00000579853 BBOX1O75936 387 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms