RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 DIAPH1O60610 1272 aaKnown RBP15.17■□□□□ 0.02
SUPT4H1-203ENST00000579289 PHACTR3Q96KR7 559 aa15.17■□□□□ 0.02
SUPT4H1-203ENST00000579289 TIMELESSQ9UNS1 1208 aa15.17■□□□□ 0.02
SUPT4H1-203ENST00000579289 NIP7Q9Y221 180 aaKnown RBP eCLIP15.17■□□□□ 0.02
SUPT4H1-203ENST00000579289 CA12O43570 354 aa15.16■□□□□ 0.02
SUPT4H1-203ENST00000579289 TEFQ10587 303 aa15.16■□□□□ 0.02
SUPT4H1-203ENST00000579289 GRM1Q13255 1194 aa15.16■□□□□ 0.02
SUPT4H1-203ENST00000579289 DGKZQ13574 1117 aa15.16■□□□□ 0.02
SUPT4H1-203ENST00000579289 EIF6P56537 245 aaKnown RBP15.15■□□□□ 0.02
SUPT4H1-203ENST00000579289 CIAPIN1Q6FI81 312 aa15.15■□□□□ 0.02
SUPT4H1-203ENST00000579289 C3orf67Q6ZVT6 689 aa15.15■□□□□ 0.02
SUPT4H1-203ENST00000579289 JDP2Q8WYK2 163 aa15.15■□□□□ 0.02
SUPT4H1-203ENST00000579289 BEGAINQ9BUH8 593 aa15.15■□□□□ 0.02
SUPT4H1-203ENST00000579289 GLIS2Q9BZE0 524 aaPredicted RBP15.15■□□□□ 0.02
SUPT4H1-203ENST00000579289 GPRC5DQ9NZD1 345 aa15.15■□□□□ 0.02
SUPT4H1-203ENST00000579289 FAM155AB1AL88 458 aaPredicted RBP15.14■□□□□ 0.01
SUPT4H1-203ENST00000579289 CELF2O95319 508 aaKnown RBP15.14■□□□□ 0.01
SUPT4H1-203ENST00000579289 CC2D2BQ6DHV5 1058 aa15.14■□□□□ 0.01
SUPT4H1-203ENST00000579289 DLK2Q6UY11 383 aa15.14■□□□□ 0.01
SUPT4H1-203ENST00000579289 ADARB2Q9NS39 739 aaKnown RBP15.14■□□□□ 0.01
SUPT4H1-203ENST00000579289 KNSTRNQ9Y448 316 aa15.14■□□□□ 0.01
SUPT4H1-203ENST00000579289 MKI67P46013 3256 aaKnown RBP15.14■□□□□ 0.01
SUPT4H1-203ENST00000579289 KIF7Q2M1P5 1343 aa15.14■□□□□ 0.01
SUPT4H1-203ENST00000579289 FAM177BA6PVY3 158 aa15.13■□□□□ 0.01
SUPT4H1-203ENST00000579289 BTBD11A6QL63 1104 aa15.13■□□□□ 0.01
SUPT4H1-203ENST00000579289 NPHP1O15259 732 aa15.13■□□□□ 0.01
SUPT4H1-203ENST00000579289 CXCL9Q07325 125 aa15.13■□□□□ 0.01
SUPT4H1-203ENST00000579289 PAXIP1Q6ZW49 1069 aaPredicted RBP15.13■□□□□ 0.01
SUPT4H1-203ENST00000579289 NUTM1Q86Y26 1132 aa15.13■□□□□ 0.01
SUPT4H1-203ENST00000579289 GAS2L2Q8NHY3 880 aa15.13■□□□□ 0.01
SUPT4H1-203ENST00000579289 UBN2Q6ZU65 1347 aa15.13■□□□□ 0.01
SUPT4H1-203ENST00000579289 NPC1L1Q9UHC9 1359 aa15.12■□□□□ 0.01
SUPT4H1-203ENST00000579289 SNRPA1P09661 255 aaKnown RBP15.12■□□□□ 0.01
SUPT4H1-203ENST00000579289 LMOD1P29536 600 aaPredicted RBP15.12■□□□□ 0.01
SUPT4H1-203ENST00000579289 RTFDC1Q9BY42 306 aaPredicted RBP15.12■□□□□ 0.01
SUPT4H1-203ENST00000579289 ZNF652Q9Y2D9 606 aa15.12■□□□□ 0.01
SUPT4H1-203ENST00000579289 NUP98P52948 1817 aa15.12■□□□□ 0.01
SUPT4H1-203ENST00000579289 SHTN1A0MZ66 631 aa15.11■□□□□ 0.01
SUPT4H1-203ENST00000579289 EIF4G2P78344 907 aaKnown RBP eCLIP15.11■□□□□ 0.01
SUPT4H1-203ENST00000579289 LARGE2Q8N3Y3 721 aa15.11■□□□□ 0.01
SUPT4H1-203ENST00000579289 TRPM4Q8TD43 1214 aa15.11■□□□□ 0.01
SUPT4H1-203ENST00000579289 CRAMP1Q96RY5 1269 aa15.11■□□□□ 0.01
SUPT4H1-203ENST00000579289 RSPH6AQ9H0K4 717 aa15.1■□□□□ 0.01
SUPT4H1-203ENST00000579289 IBTKQ9P2D0 1353 aaPredicted RBP15.1■□□□□ 0.01
SUPT4H1-203ENST00000579289 GMPSP49915 693 aaPredicted RBP15.09■□□□□ 0.01
SUPT4H1-203ENST00000579289 SOX10P56693 466 aa15.09■□□□□ 0.01
SUPT4H1-203ENST00000579289 AOC3Q16853 763 aa15.09■□□□□ 0.01
SUPT4H1-203ENST00000579289 GRIPAP1Q4V328 841 aa15.09■□□□□ 0.01
SUPT4H1-203ENST00000579289 ZC3H15Q8WU90 426 aaKnown RBP15.09■□□□□ 0.01
SUPT4H1-203ENST00000579289 CFAP44Q96MT7 982 aa15.09■□□□□ 0.01
SUPT4H1-203ENST00000579289 CLSPNQ9HAW4 1339 aa15.09■□□□□ 0.01
SUPT4H1-203ENST00000579289 ERVV-1B6SEH8 477 aa15.08■□□□□ 0
SUPT4H1-203ENST00000579289 NTSR2O95665 410 aa15.08■□□□□ 0
SUPT4H1-203ENST00000579289 PRPF38BQ5VTL8 546 aaKnown RBP15.08■□□□□ 0
SUPT4H1-203ENST00000579289 SUSD4Q5VX71 490 aa15.08■□□□□ 0
SUPT4H1-203ENST00000579289 TTLL7Q6ZT98 887 aa15.08■□□□□ 0
SUPT4H1-203ENST00000579289 ZNF34Q8IZ26 560 aa15.08■□□□□ 0
SUPT4H1-203ENST00000579289 HTTP42858 3142 aa15.08■□□□□ 0
SUPT4H1-203ENST00000579289 DUOX1Q9NRD9 1551 aa15.07■□□□□ 0
SUPT4H1-203ENST00000579289 LAMB4A4D0S4 1761 aa15.07■□□□□ 0
SUPT4H1-203ENST00000579289 YDJCA8MPS7 323 aa15.07■□□□□ 0
SUPT4H1-203ENST00000579289 NOGQ13253 232 aa15.07■□□□□ 0
SUPT4H1-203ENST00000579289 CCER1Q8TC90 406 aaPredicted RBP15.07■□□□□ 0
SUPT4H1-203ENST00000579289 VPS33BQ9H267 617 aa15.07■□□□□ 0
SUPT4H1-203ENST00000579289 ZNRF3Q9ULT6 936 aa15.07■□□□□ 0
SUPT4H1-203ENST00000579289 PPEF1O14829 653 aaPredicted RBP15.06■□□□□ 0
SUPT4H1-203ENST00000579289 PPIP5K2O43314 1243 aa15.06■□□□□ 0
SUPT4H1-203ENST00000579289 MCM10Q7L590 875 aa15.06■□□□□ 0
SUPT4H1-203ENST00000579289 LRP10Q7Z4F1 713 aa15.06■□□□□ 0
SUPT4H1-203ENST00000579289 NPM2Q86SE8 214 aaKnown RBP15.06■□□□□ 0
SUPT4H1-203ENST00000579289 NIM1KQ8IY84 436 aa15.06■□□□□ 0
SUPT4H1-203ENST00000579289 SAGE1Q9NXZ1 904 aa15.06■□□□□ 0
SUPT4H1-203ENST00000579289 ATP6V0A2Q9Y487 856 aa15.06■□□□□ 0
SUPT4H1-203ENST00000579289 CDHR2Q9BYE9 1310 aa15.06■□□□□ 0
SUPT4H1-203ENST00000579289 BRCA2P51587 3418 aa15.05■□□□□ -0
SUPT4H1-203ENST00000579289 EGFRP00533 1210 aa15.05■□□□□ -0
SUPT4H1-203ENST00000579289 DCTN1Q14203 1278 aa15.05■□□□□ -0
SUPT4H1-203ENST00000579289 CDC37L1Q7L3B6 337 aa15.05■□□□□ -0
SUPT4H1-203ENST00000579289 NYXQ9GZU5 481 aa15.05■□□□□ -0
SUPT4H1-203ENST00000579289 RNF186Q9NXI6 227 aa15.05■□□□□ -0
SUPT4H1-203ENST00000579289 MAP3K15Q6ZN16 1313 aa15.05■□□□□ -0
SUPT4H1-203ENST00000579289 TCERG1O14776 1098 aaKnown RBP15.04■□□□□ -0
SUPT4H1-203ENST00000579289 PRKAR2BP31323 418 aa15.04■□□□□ -0
SUPT4H1-203ENST00000579289 KIAA2012Q0VF49 1180 aa15.04■□□□□ -0
SUPT4H1-203ENST00000579289 SLC10A5Q5PT55 438 aa15.04■□□□□ -0
SUPT4H1-203ENST00000579289 USP48Q86UV5 1035 aa15.04■□□□□ -0
SUPT4H1-203ENST00000579289 ABCC4O15439 1325 aa15.03■□□□□ -0
SUPT4H1-203ENST00000579289 U2SURPO15042 1029 aaKnown RBP15.03■□□□□ -0
SUPT4H1-203ENST00000579289 HUNKP57058 714 aa15.03■□□□□ -0
SUPT4H1-203ENST00000579289 KIF23Q02241 960 aaPredicted RBP15.03■□□□□ -0
SUPT4H1-203ENST00000579289 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
SUPT4H1-203ENST00000579289 CSRNP1Q96S65 589 aa15.03■□□□□ -0
SUPT4H1-203ENST00000579289 POLR2AP24928 1970 aaKnown RBP15.03■□□□□ -0
SUPT4H1-203ENST00000579289 LAMB2P55268 1798 aa15.03■□□□□ -0
SUPT4H1-203ENST00000579289 KDM3BQ7LBC6 1761 aa15.03■□□□□ -0
SUPT4H1-203ENST00000579289 RGMBQ6NW40 437 aa15.02■□□□□ -0
SUPT4H1-203ENST00000579289 RPGRQ92834 1020 aaKnown RBP15.02■□□□□ -0
SUPT4H1-203ENST00000579289 RBM17Q96I25 401 aaKnown RBP15.02■□□□□ -0
SUPT4H1-203ENST00000579289 ZNF408Q9H9D4 720 aa15.02■□□□□ -0
SUPT4H1-203ENST00000579289 MIS18AQ9NYP9 233 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms