RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 NGDNQ8NEJ9 315 aaKnown RBP6.62□□□□□ -1.35
VAPA-203ENST00000577539 RTF1Q92541 710 aaKnown RBP6.62□□□□□ -1.35
VAPA-203ENST00000577539 GCC1Q96CN9 775 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 USP32Q8NFA0 1604 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 VPS9D1Q9Y2B5 631 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 USP17L3A6NCW0 530 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 USP17L4A6NCW7 530 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 FAM196BA6NMK8 535 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 MCM4P33991 863 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 EIF4A2Q14240 407 aaKnown RBP6.62□□□□□ -1.35
VAPA-203ENST00000577539 USP17L2Q6R6M4 530 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 USP17L1Q7RTZ2 530 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 SAMD7Q7Z3H4 446 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 ANTXR1Q9H6X2 564 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 A2ML1A8K2U0 1454 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 NLRP1Q9C000 1473 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 FAM135BQ49AJ0 1406 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 EDC4Q6P2E9 1401 aaKnown RBP6.62□□□□□ -1.35
VAPA-203ENST00000577539 TMEM131LA2VDJ0 1609 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 ZMYM3Q14202 1370 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 MYO5BQ9ULV0 1848 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 ACEP12821 1306 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 AMPHP49418 695 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 NUTM2GQ5VZR2 741 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 LTV1Q96GA3 475 aaPredicted RBP6.61□□□□□ -1.35
VAPA-203ENST00000577539 LRRC7Q96NW7 1537 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 TSPOAP1O95153 1857 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 ARHGAP45Q92619 1136 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 TTC21BQ7Z4L5 1316 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 PRR36Q9H6K5 1346 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 PREX1Q8TCU6 1659 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 MED14O60244 1454 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 CFHP08603 1231 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 BMP2KLQ5H9B9 411 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 RETREG3Q86VR2 466 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 ADGRB2O60241 1585 aa6.61□□□□□ -1.35
VAPA-203ENST00000577539 PSDA5PKW4 1024 aaPredicted RBP6.6□□□□□ -1.35
VAPA-203ENST00000577539 MAP10Q9P2G4 905 aa6.6□□□□□ -1.35
VAPA-203ENST00000577539 KIAA1024Q9UPX6 916 aa6.6□□□□□ -1.35
VAPA-203ENST00000577539 EID1Q9Y6B2 187 aa6.6□□□□□ -1.35
VAPA-203ENST00000577539 PATL2C9JE40 543 aaKnown RBP6.6□□□□□ -1.35
VAPA-203ENST00000577539 SMARCA5O60264 1052 aaPredicted RBP6.6□□□□□ -1.35
VAPA-203ENST00000577539 NR1H3Q13133 447 aa6.6□□□□□ -1.35
VAPA-203ENST00000577539 L1TD1Q5T7N2 865 aaKnown RBP6.6□□□□□ -1.35
VAPA-203ENST00000577539 SIRT2Q8IXJ6 389 aa6.6□□□□□ -1.35
VAPA-203ENST00000577539 C16orf71Q8IYS4 520 aaPredicted RBP6.6□□□□□ -1.35
VAPA-203ENST00000577539 TSPYL4Q9UJ04 414 aa6.6□□□□□ -1.35
VAPA-203ENST00000577539 ATP7BP35670 1465 aa6.6□□□□□ -1.35
VAPA-203ENST00000577539 GOLGA6L3A6NEY3 463 aa6.6□□□□□ -1.35
VAPA-203ENST00000577539 FOXO3O43524 673 aa6.6□□□□□ -1.35
VAPA-203ENST00000577539 CDC45O75419 566 aa6.6□□□□□ -1.35
VAPA-203ENST00000577539 ZNF853P0CG23 659 aa6.6□□□□□ -1.35
VAPA-203ENST00000577539 RICTORQ6R327 1708 aa6.6□□□□□ -1.35
VAPA-203ENST00000577539 CSB-PGBD3P0DP91 1061 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 ATP6V1AP38606 617 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 NPAS4Q8IUM7 802 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 CLP1Q92989 425 aaKnown RBP6.59□□□□□ -1.35
VAPA-203ENST00000577539 TNRQ92752 1358 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 SOWAHDA6NJG2 315 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 USP17L15C9J2P7 530 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 USP17L10C9JJH3 530 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 USP17L13C9JLJ4 530 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 USP17L12C9JPN9 530 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 USP17L11C9JVI0 530 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 USP17L21D6R901 530 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 USP17L18D6R9N7 530 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 USP17L22D6RA61 530 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 USP17L17D6RBQ6 530 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 USP17L19D6RCP7 530 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 USP17L20D6RJB6 530 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 F6X3S4 739 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 USP17L24Q0WX57 530 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 BRICD5Q6PL45 260 aa6.59□□□□□ -1.35
VAPA-203ENST00000577539 NOVA2Q9UNW9 492 aaKnown RBP6.59□□□□□ -1.35
VAPA-203ENST00000577539 FBXO33Q7Z6M2 555 aa6.59□□□□□ -1.36
VAPA-203ENST00000577539 MEIS3Q99687 375 aa6.59□□□□□ -1.36
VAPA-203ENST00000577539 ABCC4O15439 1325 aa6.58□□□□□ -1.36
VAPA-203ENST00000577539 HRO43593 1189 aa6.58□□□□□ -1.36
VAPA-203ENST00000577539 LTKP29376 864 aa6.58□□□□□ -1.36
VAPA-203ENST00000577539 PDE4CQ08493 712 aa6.58□□□□□ -1.36
VAPA-203ENST00000577539 OTUD7AQ8TE49 926 aaPredicted RBP6.58□□□□□ -1.36
VAPA-203ENST00000577539 STK31Q9BXU1 1019 aa6.58□□□□□ -1.36
VAPA-203ENST00000577539 ROBO2Q9HCK4 1378 aa6.58□□□□□ -1.36
VAPA-203ENST00000577539 FAM98CQ17RN3 349 aaKnown RBP6.58□□□□□ -1.36
VAPA-203ENST00000577539 PUS10Q3MIT2 529 aaKnown RBP6.58□□□□□ -1.36
VAPA-203ENST00000577539 HELBQ8NG08 1087 aaPredicted RBP6.58□□□□□ -1.36
VAPA-203ENST00000577539 USP17L5A8MUK1 530 aa6.58□□□□□ -1.36
VAPA-203ENST00000577539 CASC1Q6TDU7 716 aa6.58□□□□□ -1.36
VAPA-203ENST00000577539 GBP4Q96PP9 640 aa6.58□□□□□ -1.36
VAPA-203ENST00000577539 FKBPLQ9UIM3 349 aa6.58□□□□□ -1.36
VAPA-203ENST00000577539 CPSF1Q10570 1443 aaKnown RBP6.58□□□□□ -1.36
VAPA-203ENST00000577539 CPS1P31327 1500 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 AATKQ6ZMQ8 1374 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 C6orf229H3BNL8 230 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 TAGLNQ01995 201 aaKnown RBP6.57□□□□□ -1.36
VAPA-203ENST00000577539 KCNH2Q12809 1159 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 OTUD5Q96G74 571 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 HMMRO75330 724 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 ZNF16P17020 682 aaPredicted RBP6.57□□□□□ -1.36
VAPA-203ENST00000577539 NCLP19338 710 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms