RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 UBE3BQ7Z3V4 1068 aa34.98■■■■□ 3.19
CTDNEP1-210ENST00000574322 ZBTB3Q9H5J0 574 aa34.98■■■■□ 3.19
CTDNEP1-210ENST00000574322 IL1RAPL2Q9NP60 686 aa34.97■■■■□ 3.19
CTDNEP1-210ENST00000574322 RBM25P49756 843 aaKnown RBP34.96■■■■□ 3.19
CTDNEP1-210ENST00000574322 TCIRG1Q13488 830 aa34.96■■■■□ 3.19
CTDNEP1-210ENST00000574322 BCL11AQ9H165 835 aa34.96■■■■□ 3.19
CTDNEP1-210ENST00000574322 USP42Q9H9J4 1324 aaKnown RBP34.95■■■■□ 3.19
CTDNEP1-210ENST00000574322 PLSCR1O15162 318 aa34.95■■■■□ 3.18
CTDNEP1-210ENST00000574322 KIF6Q6ZMV9 814 aa34.95■■■■□ 3.18
CTDNEP1-210ENST00000574322 BAG6P46379 1132 aa34.94■■■■□ 3.18
CTDNEP1-210ENST00000574322 COPRSQ9NQ92 184 aa34.93■■■■□ 3.18
CTDNEP1-210ENST00000574322 PA2G4Q9UQ80 394 aaKnown RBP34.93■■■■□ 3.18
CTDNEP1-210ENST00000574322 MAP3K15Q6ZN16 1313 aa34.93■■■■□ 3.18
CTDNEP1-210ENST00000574322 OS9Q13438 667 aaPredicted RBP34.92■■■■□ 3.18
CTDNEP1-210ENST00000574322 IL6STP40189 918 aaPredicted RBP34.92■■■■□ 3.18
CTDNEP1-210ENST00000574322 ZNF831Q5JPB2 1677 aa34.92■■■■□ 3.18
CTDNEP1-210ENST00000574322 RREB1Q92766 1687 aa34.92■■■■□ 3.18
CTDNEP1-210ENST00000574322 RFX5P48382 616 aaPredicted RBP34.91■■■■□ 3.18
CTDNEP1-210ENST00000574322 ERICH6Q7L0X2 663 aa34.91■■■■□ 3.18
CTDNEP1-210ENST00000574322 EN1Q05925 392 aaPredicted RBP34.9■■■■□ 3.18
CTDNEP1-210ENST00000574322 G3BP1Q13283 466 aaKnown RBP eCLIP34.9■■■■□ 3.18
CTDNEP1-210ENST00000574322 CLASRPQ8N2M8 674 aaKnown RBP34.9■■■■□ 3.18
CTDNEP1-210ENST00000574322 LOC102724428A0A0B4J2F2 783 aa34.89■■■■□ 3.18
CTDNEP1-210ENST00000574322 SIK1P57059 783 aa34.89■■■■□ 3.18
CTDNEP1-210ENST00000574322 CASC1Q6TDU7 716 aa34.89■■■■□ 3.18
CTDNEP1-210ENST00000574322 GIGYF2Q6Y7W6 1299 aaKnown RBP34.89■■■■□ 3.18
CTDNEP1-210ENST00000574322 DEFB132Q7Z7B7 95 aa34.89■■■■□ 3.18
CTDNEP1-210ENST00000574322 ZBTB1Q9Y2K1 713 aa34.89■■■■□ 3.18
CTDNEP1-210ENST00000574322 FOXO4P98177 505 aa34.89■■■■□ 3.18
CTDNEP1-210ENST00000574322 TTC41PQ6P2S7 1318 aa34.89■■■■□ 3.18
CTDNEP1-210ENST00000574322 NUTM1Q86Y26 1132 aa34.88■■■■□ 3.17
CTDNEP1-210ENST00000574322 SASH1O94885 1247 aa34.87■■■■□ 3.17
CTDNEP1-210ENST00000574322 JARID2Q92833 1246 aaPredicted RBP34.87■■■■□ 3.17
CTDNEP1-210ENST00000574322 HSP90AB3PQ58FF7 597 aa34.86■■■■□ 3.17
CTDNEP1-210ENST00000574322 PI4K2BQ8TCG2 481 aa34.86■■■■□ 3.17
CTDNEP1-210ENST00000574322 CCNL1Q9UK58 526 aaPredicted RBP34.86■■■■□ 3.17
CTDNEP1-210ENST00000574322 ERVV-1B6SEH8 477 aa34.86■■■■□ 3.17
CTDNEP1-210ENST00000574322 TXNRD1Q16881 649 aa34.86■■■■□ 3.17
CTDNEP1-210ENST00000574322 TSHZ3Q63HK5 1081 aa34.86■■■■□ 3.17
CTDNEP1-210ENST00000574322 ATP6V1AP38606 617 aa34.85■■■■□ 3.17
CTDNEP1-210ENST00000574322 PTPN12Q05209 780 aaKnown RBP34.85■■■■□ 3.17
CTDNEP1-210ENST00000574322 CAMKK2Q96RR4 588 aa34.85■■■■□ 3.17
CTDNEP1-210ENST00000574322 ANKRD36CQ5JPF3 1778 aa34.84■■■■□ 3.17
CTDNEP1-210ENST00000574322 EZH2Q15910 746 aaKnown RBP34.84■■■■□ 3.17
CTDNEP1-210ENST00000574322 ZNF330Q9Y3S2 320 aaPredicted RBP34.84■■■■□ 3.17
CTDNEP1-210ENST00000574322 KCNQ4P56696 695 aa34.83■■■■□ 3.17
CTDNEP1-210ENST00000574322 BECN1Q14457 450 aa34.83■■■■□ 3.17
CTDNEP1-210ENST00000574322 SLC27A3Q5K4L6 730 aa34.83■■■■□ 3.17
CTDNEP1-210ENST00000574322 INTS5Q6P9B9 1019 aaKnown RBP34.83■■■■□ 3.17
CTDNEP1-210ENST00000574322 PROM2Q8N271 834 aa34.83■■■■□ 3.17
CTDNEP1-210ENST00000574322 DAXXQ9UER7 740 aaPredicted RBP34.83■■■■□ 3.17
CTDNEP1-210ENST00000574322 EIF5P55010 431 aaKnown RBP34.82■■■■□ 3.16
CTDNEP1-210ENST00000574322 CCDC87Q9NVE4 849 aa34.82■■■■□ 3.16
CTDNEP1-210ENST00000574322 LY75O60449 1722 aa34.82■■■■□ 3.16
CTDNEP1-210ENST00000574322 PCCAP05165 728 aaPredicted RBP34.81■■■■□ 3.16
CTDNEP1-210ENST00000574322 LMBR1LQ6UX01 489 aa34.81■■■■□ 3.16
CTDNEP1-210ENST00000574322 PLA2G12BQ9BX93 195 aa34.81■■■■□ 3.16
CTDNEP1-210ENST00000574322 LRRC4BQ9NT99 713 aa34.8■■■■□ 3.16
CTDNEP1-210ENST00000574322 RGPD3A6NKT7 1758 aaPredicted RBP34.8■■■■□ 3.16
CTDNEP1-210ENST00000574322 RGPD4Q7Z3J3 1758 aa34.8■■■■□ 3.16
CTDNEP1-210ENST00000574322 GLRX3O76003 335 aaKnown RBP34.79■■■■□ 3.16
CTDNEP1-210ENST00000574322 NUP98P52948 1817 aa34.79■■■■□ 3.16
CTDNEP1-210ENST00000574322 COL5A3P25940 1745 aaPredicted RBP34.78■■■■□ 3.16
CTDNEP1-210ENST00000574322 ITPK1Q13572 414 aa34.78■■■■□ 3.16
CTDNEP1-210ENST00000574322 HLFQ16534 295 aa34.78■■■■□ 3.16
CTDNEP1-210ENST00000574322 ECHDC1Q9NTX5 307 aa34.78■■■■□ 3.16
CTDNEP1-210ENST00000574322 ERC2O15083 957 aa34.78■■■■□ 3.16
CTDNEP1-210ENST00000574322 IFIT2P09913 472 aaKnown RBP34.78■■■■□ 3.16
CTDNEP1-210ENST00000574322 CRKLP46109 303 aaKnown RBP34.78■■■■□ 3.16
CTDNEP1-210ENST00000574322 ZBTB38Q8NAP3 1195 aaPredicted RBP34.78■■■■□ 3.16
CTDNEP1-210ENST00000574322 KLHDC4Q8TBB5 520 aa34.78■■■■□ 3.16
CTDNEP1-210ENST00000574322 GPATCH3Q96I76 525 aa34.78■■■■□ 3.16
CTDNEP1-210ENST00000574322 DZIP3Q86Y13 1208 aaKnown RBP34.77■■■■□ 3.16
CTDNEP1-210ENST00000574322 CDHR2Q9BYE9 1310 aa34.77■■■■□ 3.16
CTDNEP1-210ENST00000574322 AACSQ86V21 672 aa34.76■■■■□ 3.16
CTDNEP1-210ENST00000574322 EAF2Q96CJ1 260 aaPredicted RBP34.76■■■■□ 3.16
CTDNEP1-210ENST00000574322 USP26Q9BXU7 913 aa34.76■■■■□ 3.16
CTDNEP1-210ENST00000574322 SIL1Q9H173 461 aa34.76■■■■□ 3.16
CTDNEP1-210ENST00000574322 TRIM6-TRIM34B2RNG4 842 aa34.75■■■■□ 3.15
CTDNEP1-210ENST00000574322 REC8O95072 547 aa34.75■■■■□ 3.15
CTDNEP1-210ENST00000574322 NLRP10Q86W26 655 aa34.75■■■■□ 3.15
CTDNEP1-210ENST00000574322 CHMLP26374 656 aa34.75■■■■□ 3.15
CTDNEP1-210ENST00000574322 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.75■■■■□ 3.15
CTDNEP1-210ENST00000574322 KIF2CQ99661 725 aa34.74■■■■□ 3.15
CTDNEP1-210ENST00000574322 MYH14Q7Z406 1995 aaKnown RBP34.74■■■■□ 3.15
CTDNEP1-210ENST00000574322 SLC4A3P48751 1232 aa34.73■■■■□ 3.15
CTDNEP1-210ENST00000574322 AK9Q5TCS8 1911 aa34.73■■■■□ 3.15
CTDNEP1-210ENST00000574322 RILPL2Q969X0 211 aa34.72■■■■□ 3.15
CTDNEP1-210ENST00000574322 LINC00116Q8NCU8 138 aa34.72■■■■□ 3.15
CTDNEP1-210ENST00000574322 ZNF34Q8IZ26 560 aa34.71■■■■□ 3.15
CTDNEP1-210ENST00000574322 ARXQ96QS3 562 aa34.71■■■■□ 3.15
CTDNEP1-210ENST00000574322 ESYT1Q9BSJ8 1104 aa34.71■■■■□ 3.15
CTDNEP1-210ENST00000574322 HMGB2P26583 209 aaKnown RBP34.7■■■■□ 3.15
CTDNEP1-210ENST00000574322 RTL5Q5HYW3 569 aaPredicted RBP34.7■■■■□ 3.15
CTDNEP1-210ENST00000574322 CNTROBQ8N137 903 aa34.7■■■■□ 3.15
CTDNEP1-210ENST00000574322 TBC1D2Q9BYX2 928 aa34.7■■■■□ 3.15
CTDNEP1-210ENST00000574322 CSF1RP07333 972 aa34.69■■■■□ 3.14
CTDNEP1-210ENST00000574322 TBC1D2BQ9UPU7 963 aa34.69■■■■□ 3.14
CTDNEP1-210ENST00000574322 ANP32EQ9BTT0 268 aa34.69■■■■□ 3.14
CTDNEP1-210ENST00000574322 FBXO3Q9UK99 471 aa34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms