RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 SCNN1DP51172 638 aa14.54□□□□□ -0.08
ABR-220ENST00000573325 NPM2Q86SE8 214 aaKnown RBP14.54□□□□□ -0.08
ABR-220ENST00000573325 NGEFQ8N5V2 710 aa14.54□□□□□ -0.08
ABR-220ENST00000573325 CHL1O00533 1208 aa14.53□□□□□ -0.08
ABR-220ENST00000573325 ANXA1P04083 346 aa14.53□□□□□ -0.08
ABR-220ENST00000573325 MYL6BP14649 208 aa14.53□□□□□ -0.08
ABR-220ENST00000573325 TMPOP42166 694 aaKnown RBP14.53□□□□□ -0.08
ABR-220ENST00000573325 KRT24Q2M2I5 525 aa14.53□□□□□ -0.08
ABR-220ENST00000573325 CC2D2BQ6DHV5 1058 aa14.53□□□□□ -0.08
ABR-220ENST00000573325 GPC2Q8N158 579 aa14.53□□□□□ -0.08
ABR-220ENST00000573325 NYXQ9GZU5 481 aa14.53□□□□□ -0.08
ABR-220ENST00000573325 BABAM1Q9NWV8 329 aa14.53□□□□□ -0.08
ABR-220ENST00000573325 TRIM35Q9UPQ4 493 aa14.53□□□□□ -0.08
ABR-220ENST00000573325 RNF123Q5XPI4 1314 aa14.52□□□□□ -0.08
ABR-220ENST00000573325 EPHX2P34913 555 aa14.52□□□□□ -0.09
ABR-220ENST00000573325 RTFDC1Q9BY42 306 aaPredicted RBP14.52□□□□□ -0.09
ABR-220ENST00000573325 MKRN1Q9UHC7 482 aaKnown RBP14.52□□□□□ -0.09
ABR-220ENST00000573325 HACL1Q9UJ83 578 aa14.52□□□□□ -0.09
ABR-220ENST00000573325 COL4A1P02462 1669 aa14.52□□□□□ -0.09
ABR-220ENST00000573325 NPHP1O15259 732 aa14.51□□□□□ -0.09
ABR-220ENST00000573325 FOXN1O15353 648 aa14.51□□□□□ -0.09
ABR-220ENST00000573325 VEGFBP49765 207 aa14.51□□□□□ -0.09
ABR-220ENST00000573325 FMR1Q06787 632 aaKnown RBP eCLIP14.51□□□□□ -0.09
ABR-220ENST00000573325 RASSF10A6NK89 507 aa14.5□□□□□ -0.09
ABR-220ENST00000573325 EPS15P42566 896 aa14.5□□□□□ -0.09
ABR-220ENST00000573325 RIPK4P57078 832 aa14.5□□□□□ -0.09
ABR-220ENST00000573325 MAP1SQ66K74 1059 aaPredicted RBP14.5□□□□□ -0.09
ABR-220ENST00000573325 TSPYL4Q9UJ04 414 aa14.5□□□□□ -0.09
ABR-220ENST00000573325 DUOX1Q9NRD9 1551 aa14.49□□□□□ -0.09
ABR-220ENST00000573325 TMEM88BA6NKF7 163 aa14.49□□□□□ -0.09
ABR-220ENST00000573325 PARP10Q53GL7 1025 aa14.49□□□□□ -0.09
ABR-220ENST00000573325 NLRP10Q86W26 655 aa14.49□□□□□ -0.09
ABR-220ENST00000573325 CNTROBQ8N137 903 aa14.49□□□□□ -0.09
ABR-220ENST00000573325 WBP1LQ9NX94 342 aa14.49□□□□□ -0.09
ABR-220ENST00000573325 ATP6V0A2Q9Y487 856 aa14.49□□□□□ -0.09
ABR-220ENST00000573325 ABCC4O15439 1325 aa14.48□□□□□ -0.09
ABR-220ENST00000573325 RALBP1Q15311 655 aa14.48□□□□□ -0.09
ABR-220ENST00000573325 CST9Q5W186 159 aa14.48□□□□□ -0.09
ABR-220ENST00000573325 KIF6Q6ZMV9 814 aa14.48□□□□□ -0.09
ABR-220ENST00000573325 COPS6Q7L5N1 327 aa14.48□□□□□ -0.09
ABR-220ENST00000573325 TNS4Q8IZW8 715 aa14.48□□□□□ -0.09
ABR-220ENST00000573325 PPEF1O14829 653 aaPredicted RBP14.47□□□□□ -0.09
ABR-220ENST00000573325 TCIRG1Q13488 830 aa14.47□□□□□ -0.09
ABR-220ENST00000573325 GRIPAP1Q4V328 841 aa14.47□□□□□ -0.09
ABR-220ENST00000573325 PNMA8AQ86V59 439 aaPredicted RBP14.47□□□□□ -0.09
ABR-220ENST00000573325 XAGE3Q8WTP9 111 aa14.47□□□□□ -0.09
ABR-220ENST00000573325 DDX21Q9NR30 783 aaKnown RBP eCLIP14.47□□□□□ -0.09
ABR-220ENST00000573325 PGAP2Q9UHJ9 254 aa14.47□□□□□ -0.09
ABR-220ENST00000573325 THSD7BQ9C0I4 1608 aa14.46□□□□□ -0.09
ABR-220ENST00000573325 ZNF853P0CG23 659 aa14.46□□□□□ -0.09
ABR-220ENST00000573325 GTF2E1P29083 439 aaPredicted RBP14.46□□□□□ -0.09
ABR-220ENST00000573325 CXCL9Q07325 125 aa14.46□□□□□ -0.09
ABR-220ENST00000573325 EAPPQ56P03 285 aaPredicted RBP14.46□□□□□ -0.09
ABR-220ENST00000573325 ISCA1Q9BUE6 129 aa14.46□□□□□ -0.09
ABR-220ENST00000573325 UTP14AQ9BVJ6 771 aaKnown RBP14.46□□□□□ -0.09
ABR-220ENST00000573325 LAMB2P55268 1798 aa14.46□□□□□ -0.09
ABR-220ENST00000573325 YDJCA8MPS7 323 aa14.45□□□□□ -0.1
ABR-220ENST00000573325 HCLS1P14317 486 aaPredicted RBP14.45□□□□□ -0.1
ABR-220ENST00000573325 EIF2S2P20042 333 aaKnown RBP14.45□□□□□ -0.1
ABR-220ENST00000573325 HIRAP54198 1017 aaPredicted RBP14.45□□□□□ -0.1
ABR-220ENST00000573325 PPP1R42Q7Z4L9 355 aa14.45□□□□□ -0.1
ABR-220ENST00000573325 RPGRQ92834 1020 aaKnown RBP14.45□□□□□ -0.1
ABR-220ENST00000573325 RBM17Q96I25 401 aaKnown RBP14.45□□□□□ -0.1
ABR-220ENST00000573325 VPS33BQ9H267 617 aa14.45□□□□□ -0.1
ABR-220ENST00000573325 MAPK8IP3Q9UPT6 1336 aa14.44□□□□□ -0.1
ABR-220ENST00000573325 AOC3Q16853 763 aa14.44□□□□□ -0.1
ABR-220ENST00000573325 SP8Q8IXZ3 490 aa14.44□□□□□ -0.1
ABR-220ENST00000573325 LARGE2Q8N3Y3 721 aa14.44□□□□□ -0.1
ABR-220ENST00000573325 NLRP3Q96P20 1036 aa14.44□□□□□ -0.1
ABR-220ENST00000573325 PNNQ9H307 717 aaKnown RBP14.44□□□□□ -0.1
ABR-220ENST00000573325 PRDM10Q9NQV6 1147 aa14.44□□□□□ -0.1
ABR-220ENST00000573325 GPRC5DQ9NZD1 345 aa14.44□□□□□ -0.1
ABR-220ENST00000573325 ADAMTS8Q9UP79 889 aa14.44□□□□□ -0.1
ABR-220ENST00000573325 ANKRD36CQ5JPF3 1778 aa14.44□□□□□ -0.1
ABR-220ENST00000573325 LRRC37AA6NMS7 1700 aa14.44□□□□□ -0.1
ABR-220ENST00000573325 TRAF5O00463 557 aa14.43□□□□□ -0.1
ABR-220ENST00000573325 KIAA2012Q0VF49 1180 aa14.43□□□□□ -0.1
ABR-220ENST00000573325 CCDC146Q8IYE0 955 aa14.43□□□□□ -0.1
ABR-220ENST00000573325 JDP2Q8WYK2 163 aa14.43□□□□□ -0.1
ABR-220ENST00000573325 CHPF2Q9P2E5 772 aa14.43□□□□□ -0.1
ABR-220ENST00000573325 MYBBP1AQ9BQG0 1328 aaKnown RBP14.42□□□□□ -0.1
ABR-220ENST00000573325 TAF1P21675 1872 aa14.42□□□□□ -0.1
ABR-220ENST00000573325 TCERG1O14776 1098 aaKnown RBP14.42□□□□□ -0.1
ABR-220ENST00000573325 BBOX1O75936 387 aa14.42□□□□□ -0.1
ABR-220ENST00000573325 TRIM28Q13263 835 aaKnown RBP14.42□□□□□ -0.1
ABR-220ENST00000573325 USP50Q70EL3 339 aaPredicted RBP14.42□□□□□ -0.1
ABR-220ENST00000573325 NECTIN2Q92692 538 aa14.42□□□□□ -0.1
ABR-220ENST00000573325 ZNRF3Q9ULT6 936 aa14.42□□□□□ -0.1
ABR-220ENST00000573325 GJA3Q9Y6H8 435 aa14.42□□□□□ -0.1
ABR-220ENST00000573325 DDX60Q8IY21 1712 aaKnown RBP14.41□□□□□ -0.1
ABR-220ENST00000573325 SHTN1A0MZ66 631 aa14.41□□□□□ -0.1
ABR-220ENST00000573325 PPIP5K2O43314 1243 aa14.41□□□□□ -0.1
ABR-220ENST00000573325 NEFMP07197 916 aa14.41□□□□□ -0.1
ABR-220ENST00000573325 HOXB7P09629 217 aa14.41□□□□□ -0.1
ABR-220ENST00000573325 HSPA8P11142 646 aaKnown RBP14.41□□□□□ -0.1
ABR-220ENST00000573325 EIF6P56537 245 aaKnown RBP14.41□□□□□ -0.1
ABR-220ENST00000573325 GRAPQ13588 217 aa14.41□□□□□ -0.1
ABR-220ENST00000573325 SF3B3Q15393 1217 aaKnown RBP14.41□□□□□ -0.1
ABR-220ENST00000573325 PLBD2Q8NHP8 589 aa14.41□□□□□ -0.1
ABR-220ENST00000573325 GRAPLQ8TC17 118 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms