RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ZNF211Q13398 564 aaPredicted RBP8.63□□□□□ -1.03
SF3B3-214ENST00000572365 SF3B2Q13435 895 aaKnown RBP8.63□□□□□ -1.03
SF3B3-214ENST00000572365 PPARGC1BQ86YN6 1023 aaKnown RBP8.63□□□□□ -1.03
SF3B3-214ENST00000572365 TSEN34Q9BSV6 310 aaKnown RBP8.63□□□□□ -1.03
SF3B3-214ENST00000572365 ZNF395Q9H8N7 513 aaPredicted RBP8.63□□□□□ -1.03
SF3B3-214ENST00000572365 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.63□□□□□ -1.033e-25■■■■■ 109.6
SF3B3-214ENST00000572365 CEP170BQ9Y4F5 1589 aaPredicted RBP8.63□□□□□ -1.03
SF3B3-214ENST00000572365 KIDINS220Q9ULH0 1771 aa8.63□□□□□ -1.03
SF3B3-214ENST00000572365 CDC42BPBQ9Y5S2 1711 aa8.63□□□□□ -1.03
SF3B3-214ENST00000572365 PTPRKQ15262 1439 aa8.63□□□□□ -1.03
SF3B3-214ENST00000572365 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.62□□□□□ -1.03
SF3B3-214ENST00000572365 GPC1P35052 558 aa8.62□□□□□ -1.03
SF3B3-214ENST00000572365 HNRNPMP52272 730 aaKnown RBP eCLIP8.62□□□□□ -1.03
SF3B3-214ENST00000572365 FKBP4Q02790 459 aaKnown RBP eCLIP8.62□□□□□ -1.03
SF3B3-214ENST00000572365 TEAD4Q15561 434 aa8.62□□□□□ -1.03
SF3B3-214ENST00000572365 HELQQ8TDG4 1101 aa8.62□□□□□ -1.03
SF3B3-214ENST00000572365 VTI1AQ96AJ9 217 aa8.62□□□□□ -1.03
SF3B3-214ENST00000572365 H3BRB1 525 aa8.61□□□□□ -1.03
SF3B3-214ENST00000572365 NAA30Q147X3 362 aaPredicted RBP8.61□□□□□ -1.03
SF3B3-214ENST00000572365 ECM1Q16610 540 aa8.61□□□□□ -1.03
SF3B3-214ENST00000572365 ANKLE2Q86XL3 938 aa8.61□□□□□ -1.03
SF3B3-214ENST00000572365 TUT1Q9H6E5 874 aaKnown RBP8.61□□□□□ -1.03
SF3B3-214ENST00000572365 NPATQ14207 1427 aa8.61□□□□□ -1.03
SF3B3-214ENST00000572365 DNMT1P26358 1616 aaKnown RBP8.61□□□□□ -1.03
SF3B3-214ENST00000572365 KDM5CP41229 1560 aa8.61□□□□□ -1.03
SF3B3-214ENST00000572365 POLR1AO95602 1720 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-214ENST00000572365 CPS1P31327 1500 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 PLA2R1Q13018 1463 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 SERTM1A2A2V5 107 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 EML1O00423 815 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 CAPN5O15484 640 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-214ENST00000572365 SPINT1O43278 529 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 NPR3P17342 541 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 C16orf46Q6P387 395 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 GLYCTKQ8IVS8 523 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 ZDHHC1Q8WTX9 485 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 ZSCAN10Q96SZ4 725 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-214ENST00000572365 GRIP2Q9C0E4 1043 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 ANO2Q9NQ90 1003 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 PDZRN3Q9UPQ7 1066 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 CHMP3Q9Y3E7 222 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 CNTLNQ9NXG0 1405 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 VWDEQ8N2E2 1590 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 NEURL4Q96JN8 1562 aa8.6□□□□□ -1.03
SF3B3-214ENST00000572365 AGLP35573 1532 aa8.59□□□□□ -1.03
SF3B3-214ENST00000572365 ZNF142P52746 1687 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-214ENST00000572365 NOS2P35228 1153 aa8.59□□□□□ -1.03
SF3B3-214ENST00000572365 RNF144AP50876 292 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-214ENST00000572365 MTMR3Q13615 1198 aa8.59□□□□□ -1.03
SF3B3-214ENST00000572365 LINC00528Q8N1L1 170 aa8.59□□□□□ -1.03
SF3B3-214ENST00000572365 MYO19Q96H55 970 aa8.59□□□□□ -1.03
SF3B3-214ENST00000572365 BIN2Q9UBW5 565 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-214ENST00000572365 AVPP01185 164 aa8.58□□□□□ -1.04
SF3B3-214ENST00000572365 DNAJC14Q6Y2X3 702 aaPredicted RBP8.58□□□□□ -1.04
SF3B3-214ENST00000572365 RHBDD1Q8TEB9 315 aa8.58□□□□□ -1.04
SF3B3-214ENST00000572365 L3MBTL2Q969R5 705 aa8.58□□□□□ -1.04
SF3B3-214ENST00000572365 INSM2Q96T92 566 aaPredicted RBP8.58□□□□□ -1.04
SF3B3-214ENST00000572365 NIFKQ9BYG3 293 aaKnown RBP8.58□□□□□ -1.04
SF3B3-214ENST00000572365 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
SF3B3-214ENST00000572365 QTRT2Q9H974 415 aaKnown RBP8.58□□□□□ -1.04
SF3B3-214ENST00000572365 MROH2AA6NES4 1674 aa8.58□□□□□ -1.04
SF3B3-214ENST00000572365 LRRC7Q96NW7 1537 aa8.58□□□□□ -1.04
SF3B3-214ENST00000572365 MLH3Q9UHC1 1453 aa8.57□□□□□ -1.04
SF3B3-214ENST00000572365 UPP2O95045 317 aa8.57□□□□□ -1.04
SF3B3-214ENST00000572365 MARSP56192 900 aaKnown RBP8.57□□□□□ -1.04
SF3B3-214ENST00000572365 ARHGAP4P98171 946 aa8.57□□□□□ -1.04
SF3B3-214ENST00000572365 COX20Q5RI15 118 aa8.57□□□□□ -1.04
SF3B3-214ENST00000572365 TMEM214Q6NUQ4 689 aaKnown RBP8.57□□□□□ -1.04
SF3B3-214ENST00000572365 NPM2Q86SE8 214 aaKnown RBP8.57□□□□□ -1.04
SF3B3-214ENST00000572365 IRX2Q9BZI1 471 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-214ENST00000572365 CABP1Q9NZU7 370 aa8.57□□□□□ -1.04
SF3B3-214ENST00000572365 REREQ9P2R6 1566 aa8.56□□□□□ -1.04
SF3B3-214ENST00000572365 SPAG9O60271 1321 aaKnown RBP8.56□□□□□ -1.04
SF3B3-214ENST00000572365 ITSN2Q9NZM3 1697 aa8.56□□□□□ -1.04
SF3B3-214ENST00000572365 TNFRSF10BO14763 440 aa8.56□□□□□ -1.04
SF3B3-214ENST00000572365 FAM13AO94988 1023 aa8.56□□□□□ -1.04
SF3B3-214ENST00000572365 ERCC3P19447 782 aa8.56□□□□□ -1.04
SF3B3-214ENST00000572365 GTF2E1P29083 439 aaPredicted RBP8.56□□□□□ -1.04
SF3B3-214ENST00000572365 SH3PXD2AQ5TCZ1 1133 aa8.56□□□□□ -1.04
SF3B3-214ENST00000572365 FOXD4L5Q5VV16 416 aaPredicted RBP8.56□□□□□ -1.04
SF3B3-214ENST00000572365 ZNF232Q9UNY5 417 aa8.56□□□□□ -1.04
SF3B3-214ENST00000572365 XIRP1Q702N8 1843 aaKnown RBP8.56□□□□□ -1.04
SF3B3-214ENST00000572365 A2ML1A8K2U0 1454 aa8.56□□□□□ -1.04
SF3B3-214ENST00000572365 SPATA31C2B4DYI2 1134 aa8.55□□□□□ -1.04
SF3B3-214ENST00000572365 CTSOP43234 321 aaPredicted RBP8.55□□□□□ -1.04
SF3B3-214ENST00000572365 GNASQ5JWF2 1037 aa8.55□□□□□ -1.04
SF3B3-214ENST00000572365 SLC27A3Q5K4L6 730 aa8.55□□□□□ -1.04
SF3B3-214ENST00000572365 ALDH16A1Q8IZ83 802 aa8.55□□□□□ -1.04
SF3B3-214ENST00000572365 FOXD4L4Q8WXT5 416 aaPredicted RBP8.55□□□□□ -1.04
SF3B3-214ENST00000572365 LRFN2Q9ULH4 789 aa8.55□□□□□ -1.04
SF3B3-214ENST00000572365 AMOTL2Q9Y2J4 779 aa8.55□□□□□ -1.04
SF3B3-214ENST00000572365 NPHP4O75161 1426 aaPredicted RBP8.54□□□□□ -1.04
SF3B3-214ENST00000572365 FAM187AA6NFU0 413 aa8.54□□□□□ -1.04
SF3B3-214ENST00000572365 RTN1Q16799 776 aa8.54□□□□□ -1.04
SF3B3-214ENST00000572365 NOM1Q5C9Z4 860 aaKnown RBP8.54□□□□□ -1.04
SF3B3-214ENST00000572365 C1orf53Q5VUE5 145 aa8.54□□□□□ -1.04
SF3B3-214ENST00000572365 MRPL14Q6P1L8 145 aaKnown RBP8.54□□□□□ -1.04
SF3B3-214ENST00000572365 POLMQ9NP87 494 aaPredicted RBP8.54□□□□□ -1.04
SF3B3-214ENST00000572365 STIM2Q9P246 746 aa8.54□□□□□ -1.04
SF3B3-214ENST00000572365 CDK11AQ9UQ88 783 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms