RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 XAGE3Q8WTP9 111 aa19.65■□□□□ 0.74
RAB40B-203ENST00000570676 CHPF2Q9P2E5 772 aa19.65■□□□□ 0.74
RAB40B-203ENST00000570676 HDGFL1Q5TGJ6 251 aa19.64■□□□□ 0.73
RAB40B-203ENST00000570676 OLFM4Q6UX06 510 aa19.64■□□□□ 0.73
RAB40B-203ENST00000570676 COPS6Q7L5N1 327 aa19.64■□□□□ 0.73
RAB40B-203ENST00000570676 RBM46Q8TBY0 533 aaKnown RBP19.64■□□□□ 0.73
RAB40B-203ENST00000570676 RRAGCQ9HB90 399 aa19.64■□□□□ 0.73
RAB40B-203ENST00000570676 C3orf67Q6ZVT6 689 aa19.63■□□□□ 0.73
RAB40B-203ENST00000570676 IFT57Q9NWB7 429 aa19.63■□□□□ 0.73
RAB40B-203ENST00000570676 AIMP1Q12904 312 aaKnown RBP19.62■□□□□ 0.73
RAB40B-203ENST00000570676 PPP1R42Q7Z4L9 355 aa19.62■□□□□ 0.73
RAB40B-203ENST00000570676 RNF123Q5XPI4 1314 aa19.61■□□□□ 0.73
RAB40B-203ENST00000570676 ALDH1B1P30837 517 aa19.61■□□□□ 0.73
RAB40B-203ENST00000570676 HOXA10P31260 410 aaPredicted RBP19.61■□□□□ 0.73
RAB40B-203ENST00000570676 DUSP27Q5VZP5 1158 aa19.61■□□□□ 0.73
RAB40B-203ENST00000570676 COL4A5P29400 1685 aa19.6■□□□□ 0.73
RAB40B-203ENST00000570676 GNAI1P63096 354 aa19.6■□□□□ 0.73
RAB40B-203ENST00000570676 FKBP4Q02790 459 aaKnown RBP eCLIP19.6■□□□□ 0.73
RAB40B-203ENST00000570676 HSP90AB3PQ58FF7 597 aa19.6■□□□□ 0.73
RAB40B-203ENST00000570676 NLRP10Q86W26 655 aa19.6■□□□□ 0.73
RAB40B-203ENST00000570676 LRRC37AA6NMS7 1700 aa19.59■□□□□ 0.73
RAB40B-203ENST00000570676 TAF1P21675 1872 aa19.59■□□□□ 0.73
RAB40B-203ENST00000570676 POTECB2RU33 542 aa19.59■□□□□ 0.73
RAB40B-203ENST00000570676 CALD1Q05682 793 aaKnown RBP19.59■□□□□ 0.73
RAB40B-203ENST00000570676 SLC51AQ86UW1 340 aa19.59■□□□□ 0.73
RAB40B-203ENST00000570676 C16orf71Q8IYS4 520 aaPredicted RBP19.59■□□□□ 0.73
RAB40B-203ENST00000570676 RPGRQ92834 1020 aaKnown RBP19.59■□□□□ 0.73
RAB40B-203ENST00000570676 UTP14AQ9BVJ6 771 aaKnown RBP19.59■□□□□ 0.73
RAB40B-203ENST00000570676 DBF4Q9UBU7 674 aaPredicted RBP19.59■□□□□ 0.73
RAB40B-203ENST00000570676 SCN4AP35499 1836 aa19.59■□□□□ 0.73
RAB40B-203ENST00000570676 TCIRG1Q13488 830 aa19.58■□□□□ 0.72
RAB40B-203ENST00000570676 SLC10A5Q5PT55 438 aa19.58■□□□□ 0.72
RAB40B-203ENST00000570676 FSTL1Q12841 308 aa19.57■□□□□ 0.72
RAB40B-203ENST00000570676 RTKN2Q8IZC4 609 aa19.57■□□□□ 0.72
RAB40B-203ENST00000570676 PLBD2Q8NHP8 589 aa19.57■□□□□ 0.72
RAB40B-203ENST00000570676 CRAMP1Q96RY5 1269 aa19.57■□□□□ 0.72
RAB40B-203ENST00000570676 ZNF277Q9NRM2 450 aaPredicted RBP19.57■□□□□ 0.72
RAB40B-203ENST00000570676 VEGFAP15692 232 aaPredicted RBP19.56■□□□□ 0.72
RAB40B-203ENST00000570676 DPY19L2Q6NUT2 758 aa19.56■□□□□ 0.72
RAB40B-203ENST00000570676 RBM17Q96I25 401 aaKnown RBP19.56■□□□□ 0.72
RAB40B-203ENST00000570676 COL4A1P02462 1669 aa19.56■□□□□ 0.72
RAB40B-203ENST00000570676 APLP1P51693 650 aa19.55■□□□□ 0.72
RAB40B-203ENST00000570676 CCDC27Q2M243 656 aa19.55■□□□□ 0.72
RAB40B-203ENST00000570676 SYNE4Q8N205 404 aa19.55■□□□□ 0.72
RAB40B-203ENST00000570676 NLRP3Q96P20 1036 aa19.55■□□□□ 0.72
RAB40B-203ENST00000570676 PSMD1Q99460 953 aa19.55■□□□□ 0.72
RAB40B-203ENST00000570676 HYPKQ9NX55 129 aa19.55■□□□□ 0.72
RAB40B-203ENST00000570676 ADAMTSL1Q8N6G6 1762 aa19.55■□□□□ 0.72
RAB40B-203ENST00000570676 ABCC4O15439 1325 aa19.54■□□□□ 0.72
RAB40B-203ENST00000570676 ZNF541Q9H0D2 1346 aa19.54■□□□□ 0.72
RAB40B-203ENST00000570676 PPEF1O14829 653 aaPredicted RBP19.54■□□□□ 0.72
RAB40B-203ENST00000570676 DDNO94850 711 aaPredicted RBP19.54■□□□□ 0.72
RAB40B-203ENST00000570676 CC2D2BQ6DHV5 1058 aa19.54■□□□□ 0.72
RAB40B-203ENST00000570676 ANKRD13DQ6ZTN6 518 aa19.54■□□□□ 0.72
RAB40B-203ENST00000570676 C8orf58Q8NAV2 365 aa19.54■□□□□ 0.72
RAB40B-203ENST00000570676 SMC1BQ8NDV3 1235 aa19.54■□□□□ 0.72
RAB40B-203ENST00000570676 ISCA1Q9BUE6 129 aa19.54■□□□□ 0.72
RAB40B-203ENST00000570676 SH3TC1Q8TE82 1336 aa19.53■□□□□ 0.72
RAB40B-203ENST00000570676 ELL2O00472 640 aaPredicted RBP19.53■□□□□ 0.72
RAB40B-203ENST00000570676 IARSP41252 1262 aaKnown RBP19.53■□□□□ 0.72
RAB40B-203ENST00000570676 YTHDC1Q96MU7 727 aaKnown RBP19.53■□□□□ 0.72
RAB40B-203ENST00000570676 TRMT112Q9UI30 125 aaKnown RBP19.53■□□□□ 0.72
RAB40B-203ENST00000570676 DUOX1Q9NRD9 1551 aa19.53■□□□□ 0.72
RAB40B-203ENST00000570676 HCLS1P14317 486 aaPredicted RBP19.52■□□□□ 0.72
RAB40B-203ENST00000570676 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
RAB40B-203ENST00000570676 PHAXQ9H814 394 aaKnown RBP19.52■□□□□ 0.72
RAB40B-203ENST00000570676 LTBP1Q14766 1721 aa19.51■□□□□ 0.71
RAB40B-203ENST00000570676 TSR2Q969E8 191 aaKnown RBP19.51■□□□□ 0.71
RAB40B-203ENST00000570676 L3MBTL3Q96JM7 780 aaPredicted RBP19.51■□□□□ 0.71
RAB40B-203ENST00000570676 ATP5J2-PTCD1G3V325 749 aa19.5■□□□□ 0.71
RAB40B-203ENST00000570676 FZD9O00144 591 aa19.5■□□□□ 0.71
RAB40B-203ENST00000570676 HNRNPUQ00839 825 aaKnown RBP eCLIP19.5■□□□□ 0.71
RAB40B-203ENST00000570676 TSPYL6Q8N831 410 aa19.5■□□□□ 0.71
RAB40B-203ENST00000570676 ZNF428Q96B54 188 aa19.5■□□□□ 0.71
RAB40B-203ENST00000570676 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
RAB40B-203ENST00000570676 GRIPAP1Q4V328 841 aa19.49■□□□□ 0.71
RAB40B-203ENST00000570676 NCBP3Q53F19 620 aaKnown RBP19.49■□□□□ 0.71
RAB40B-203ENST00000570676 ATP6V0A2Q9Y487 856 aa19.49■□□□□ 0.71
RAB40B-203ENST00000570676 GOLGA2Q08379 1002 aa19.48■□□□□ 0.71
RAB40B-203ENST00000570676 TRIM28Q13263 835 aaKnown RBP19.48■□□□□ 0.71
RAB40B-203ENST00000570676 CACNA1FO60840 1977 aa19.48■□□□□ 0.71
RAB40B-203ENST00000570676 IL16Q14005 1332 aa19.48■□□□□ 0.71
RAB40B-203ENST00000570676 POTEIP0CG38 1075 aa19.47■□□□□ 0.71
RAB40B-203ENST00000570676 POTEJP0CG39 1038 aa19.47■□□□□ 0.71
RAB40B-203ENST00000570676 HTRA3P83110 453 aa19.47■□□□□ 0.71
RAB40B-203ENST00000570676 DNAJC5GQ8N7S2 189 aa19.47■□□□□ 0.71
RAB40B-203ENST00000570676 FAM89AQ96GI7 184 aa19.47■□□□□ 0.71
RAB40B-203ENST00000570676 CEP350Q5VT06 3117 aa19.47■□□□□ 0.71
RAB40B-203ENST00000570676 MYH3P11055 1940 aa19.47■□□□□ 0.71
RAB40B-203ENST00000570676 GRAPQ13588 217 aa19.46■□□□□ 0.71
RAB40B-203ENST00000570676 CCDC30Q5VVM6 783 aa19.46■□□□□ 0.71
RAB40B-203ENST00000570676 GRAPLQ8TC17 118 aaPredicted RBP19.46■□□□□ 0.71
RAB40B-203ENST00000570676 IQCA1LA6NCM1 817 aa19.45■□□□□ 0.7
RAB40B-203ENST00000570676 DDX46Q7L014 1031 aaKnown RBP19.45■□□□□ 0.7
RAB40B-203ENST00000570676 RIC3Q7Z5B4 369 aa19.45■□□□□ 0.7
RAB40B-203ENST00000570676 SALL2Q9Y467 1007 aaPredicted RBP19.45■□□□□ 0.7
RAB40B-203ENST00000570676 BBOX1O75936 387 aa19.44■□□□□ 0.7
RAB40B-203ENST00000570676 SF3B3Q15393 1217 aaKnown RBP19.44■□□□□ 0.7
RAB40B-203ENST00000570676 SP8Q8IXZ3 490 aa19.44■□□□□ 0.7
RAB40B-203ENST00000570676 JDP2Q8WYK2 163 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms