RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 KCNG4Q8TDN1 519 aa19.05■□□□□ 0.64
TSC2-222ENST00000568454 DDX12PQ92771 950 aa19.05■□□□□ 0.64
TSC2-222ENST00000568454 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
TSC2-222ENST00000568454 CNPY2Q9Y2B0 182 aa19.05■□□□□ 0.64
TSC2-222ENST00000568454 EPRSP07814 1512 aaKnown RBP19.05■□□□□ 0.64
TSC2-222ENST00000568454 CETN1Q12798 172 aa19.04■□□□□ 0.64
TSC2-222ENST00000568454 UBA5Q9GZZ9 404 aa19.04■□□□□ 0.64
TSC2-222ENST00000568454 TTC12Q9H892 705 aaPredicted RBP19.04■□□□□ 0.64
TSC2-222ENST00000568454 RMND1Q9NWS8 449 aa19.04■□□□□ 0.64
TSC2-222ENST00000568454 TCP11L1Q9NUJ3 509 aa19.04■□□□□ 0.64
TSC2-222ENST00000568454 ZFP91Q96JP5 570 aaPredicted RBP19.04■□□□□ 0.64
TSC2-222ENST00000568454 AKR1B10O60218 316 aa19.04■□□□□ 0.64
TSC2-222ENST00000568454 TRIM21P19474 475 aaKnown RBP19.04■□□□□ 0.64
TSC2-222ENST00000568454 NOP2P46087 812 aaKnown RBP19.04■□□□□ 0.64
TSC2-222ENST00000568454 TUBBP07437 444 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 PIP4K2BP78356 416 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 RAB3GAP1Q15042 981 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 FBF1Q8TES7 1133 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 CALML4Q96GE6 196 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 PRIM1P49642 420 aaKnown RBP19.03■□□□□ 0.64
TSC2-222ENST00000568454 CCDC61Q9Y6R9 512 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 SMC5Q8IY18 1101 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 C8orf34Q49A92 452 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 CATIPQ7Z7H3 387 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 MRPS27Q92552 414 aaKnown RBP19.03■□□□□ 0.64
TSC2-222ENST00000568454 CC2D2AQ9P2K1 1620 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 KIAA0586Q9BVV6 1533 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 EBAG9O00559 213 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 FAM69CQ0P6D2 419 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 TTC31Q49AM3 519 aaPredicted RBP19.03■□□□□ 0.64
TSC2-222ENST00000568454 DNAI2Q9GZS0 605 aa19.03■□□□□ 0.64
TSC2-222ENST00000568454 MACROD2A1Z1Q3 448 aa19.02■□□□□ 0.64
TSC2-222ENST00000568454 POLR3DP05423 398 aaPredicted RBP19.02■□□□□ 0.64
TSC2-222ENST00000568454 PRPF4BQ13523 1007 aaKnown RBP19.02■□□□□ 0.64
TSC2-222ENST00000568454 TOM1L2Q6ZVM7 507 aa19.02■□□□□ 0.64
TSC2-222ENST00000568454 ARHGAP45Q92619 1136 aa19.02■□□□□ 0.64
TSC2-222ENST00000568454 MKNK2Q9HBH9 465 aa19.02■□□□□ 0.64
TSC2-222ENST00000568454 CCDC82Q8N4S0 544 aa19.02■□□□□ 0.64
TSC2-222ENST00000568454 NSD2O96028 1365 aa19.02■□□□□ 0.63
TSC2-222ENST00000568454 FLIIQ13045 1269 aa19.02■□□□□ 0.63
TSC2-222ENST00000568454 MEX3CQ5U5Q3 659 aaKnown RBP19.02■□□□□ 0.63
TSC2-222ENST00000568454 MICALL1Q8N3F8 863 aa19.02■□□□□ 0.63
TSC2-222ENST00000568454 MYD88Q99836 296 aa19.02■□□□□ 0.63
TSC2-222ENST00000568454 F13A1P00488 732 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 STRN4Q9NRL3 753 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 SNAPC4Q5SXM2 1469 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 ATRIPQ8WXE1 791 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 LRRC27Q9C0I9 530 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 BMP15O95972 392 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 KIAA0753Q2KHM9 967 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 MSL1Q68DK7 614 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 ISM2Q6H9L7 571 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 NBPF11Q86T75 865 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 DACT1Q9NYF0 836 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 CTAGE9A4FU28 777 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 SDSP20132 328 aa19.01■□□□□ 0.63
TSC2-222ENST00000568454 CCDC85AQ96PX6 553 aaPredicted RBP19.01■□□□□ 0.63
TSC2-222ENST00000568454 SYT1P21579 422 aa19■□□□□ 0.63
TSC2-222ENST00000568454 UBA7P41226 1012 aa19■□□□□ 0.63
TSC2-222ENST00000568454 IRX3P78415 501 aaPredicted RBP19■□□□□ 0.63
TSC2-222ENST00000568454 ANKRD18BA2A2Z9 1011 aa19■□□□□ 0.63
TSC2-222ENST00000568454 RANBP6O60518 1105 aaKnown RBP19■□□□□ 0.63
TSC2-222ENST00000568454 ZSCAN29Q8IWY8 852 aaPredicted RBP19■□□□□ 0.63
TSC2-222ENST00000568454 TRIM47Q96LD4 638 aa19■□□□□ 0.63
TSC2-222ENST00000568454 ATP2C2O75185 946 aa19■□□□□ 0.63
TSC2-222ENST00000568454 CTNNA2P26232 953 aa19■□□□□ 0.63
TSC2-222ENST00000568454 METAP2P50579 478 aaKnown RBP eCLIP19■□□□□ 0.631e-7■■■■■ 29
TSC2-222ENST00000568454 NUDT16Q96DE0 195 aaKnown RBP19■□□□□ 0.63
TSC2-222ENST00000568454 MPHOSPH10O00566 681 aaKnown RBP19■□□□□ 0.63
TSC2-222ENST00000568454 AOPEPQ8N6M6 819 aa19■□□□□ 0.63
TSC2-222ENST00000568454 DNAJC25Q9H1X3 360 aa19■□□□□ 0.63
TSC2-222ENST00000568454 HYPKQ9NX55 129 aa18.99■□□□□ 0.63
TSC2-222ENST00000568454 CAVIN4Q5BKX8 364 aa18.99■□□□□ 0.63
TSC2-222ENST00000568454 NCOA7Q8NI08 942 aa18.99■□□□□ 0.63
TSC2-222ENST00000568454 RNF216Q9NWF9 866 aaPredicted RBP18.99■□□□□ 0.63
TSC2-222ENST00000568454 DBF4Q9UBU7 674 aaPredicted RBP18.99■□□□□ 0.63
TSC2-222ENST00000568454 TYRO3Q06418 890 aa18.99■□□□□ 0.63
TSC2-222ENST00000568454 CCDC121Q6ZUS5 278 aa18.99■□□□□ 0.63
TSC2-222ENST00000568454 STMN4Q9H169 189 aaPredicted RBP18.99■□□□□ 0.63
TSC2-222ENST00000568454 PCF11O94913 1555 aaKnown RBP18.99■□□□□ 0.63
TSC2-222ENST00000568454 MYO1BO43795 1136 aa18.99■□□□□ 0.63
TSC2-222ENST00000568454 CCDC6Q16204 474 aa18.99■□□□□ 0.63
TSC2-222ENST00000568454 ANKS4BQ8N8V4 417 aa18.99■□□□□ 0.63
TSC2-222ENST00000568454 TACC1O75410 805 aa18.99■□□□□ 0.63
TSC2-222ENST00000568454 STARD3NLO95772 234 aa18.99■□□□□ 0.63
TSC2-222ENST00000568454 TMEM67Q5HYA8 995 aa18.99■□□□□ 0.63
TSC2-222ENST00000568454 V9GYY5 206 aaPredicted RBP18.99■□□□□ 0.63
TSC2-222ENST00000568454 RBM5P52756 815 aaKnown RBP eCLIP18.98■□□□□ 0.633e-6■□□□□ 9.3
TSC2-222ENST00000568454 IDEP14735 1019 aa18.98■□□□□ 0.63
TSC2-222ENST00000568454 IFIT5Q13325 482 aaKnown RBP18.98■□□□□ 0.63
TSC2-222ENST00000568454 CCDC96Q2M329 555 aa18.98■□□□□ 0.63
TSC2-222ENST00000568454 PROSER2Q86WR7 435 aaPredicted RBP18.98■□□□□ 0.63
TSC2-222ENST00000568454 OTUD6BQ8N6M0 293 aa18.98■□□□□ 0.63
TSC2-222ENST00000568454 HOMER2Q9NSB8 354 aa18.98■□□□□ 0.63
TSC2-222ENST00000568454 PLVAPQ9BX97 442 aa18.98■□□□□ 0.63
TSC2-222ENST00000568454 CCDC172P0C7W6 258 aa18.98■□□□□ 0.63
TSC2-222ENST00000568454 KCNH5Q8NCM2 988 aa18.98■□□□□ 0.63
TSC2-222ENST00000568454 ESYT1Q9BSJ8 1104 aa18.98■□□□□ 0.63
TSC2-222ENST00000568454 RASSF4Q9H2L5 321 aa18.98■□□□□ 0.63
TSC2-222ENST00000568454 TCERG1LQ5VWI1 586 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms