RNA–Protein interactions for RNA: ENST00000567306.5

PDXDC1-215, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-215ENST00000567306 KAZALD1Q96I82 304 aa9.34□□□□□ -0.91
PDXDC1-215ENST00000567306 SUCLG2Q96I99 432 aa9.34□□□□□ -0.91
PDXDC1-215ENST00000567306 ARXQ96QS3 562 aa9.34□□□□□ -0.91
PDXDC1-215ENST00000567306 ISCA1Q9BUE6 129 aa9.34□□□□□ -0.91
PDXDC1-215ENST00000567306 LRRC4BQ9NT99 713 aa9.34□□□□□ -0.91
PDXDC1-215ENST00000567306 C9orf78Q9NZ63 289 aaPredicted RBP9.34□□□□□ -0.91
PDXDC1-215ENST00000567306 TBC1D2BQ9UPU7 963 aa9.34□□□□□ -0.91
PDXDC1-215ENST00000567306 RGPD3A6NKT7 1758 aaPredicted RBP9.33□□□□□ -0.92
PDXDC1-215ENST00000567306 RGPD4Q7Z3J3 1758 aa9.33□□□□□ -0.92
PDXDC1-215ENST00000567306 PNMA6EA0A0J9YXQ4 647 aa9.33□□□□□ -0.92
PDXDC1-215ENST00000567306 CAMTA2O94983 1202 aa9.33□□□□□ -0.92
PDXDC1-215ENST00000567306 VASPP50552 380 aaPredicted RBP9.33□□□□□ -0.92
PDXDC1-215ENST00000567306 CASP7P55210 303 aa9.33□□□□□ -0.92
PDXDC1-215ENST00000567306 TCIRG1Q13488 830 aa9.33□□□□□ -0.92
PDXDC1-215ENST00000567306 GIGYF2Q6Y7W6 1299 aaKnown RBP9.33□□□□□ -0.92
PDXDC1-215ENST00000567306 JARID2Q92833 1246 aaPredicted RBP9.33□□□□□ -0.92
PDXDC1-215ENST00000567306 CWC25Q9NXE8 425 aaPredicted RBP9.33□□□□□ -0.92
PDXDC1-215ENST00000567306 PDZRN3Q9UPQ7 1066 aa9.33□□□□□ -0.92
PDXDC1-215ENST00000567306 UBN2Q6ZU65 1347 aa9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 A0A087WZG4 1122 aa9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 ERVV-1B6SEH8 477 aa9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 GNPATO15228 680 aa9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 GPTP24298 496 aa9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 ATP8B2P98198 1209 aa9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 EPHA10Q5JZY3 1008 aa9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 RC3H1Q5TC82 1133 aaKnown RBP9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 UBE3BQ7Z3V4 1068 aa9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 PPP1R42Q7Z4L9 355 aa9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 CCDC191Q8NCU4 936 aa9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 BICC1Q9H694 974 aaKnown RBP9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 NUP98P52948 1817 aa9.32□□□□□ -0.92
PDXDC1-215ENST00000567306 HMMRO75330 724 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 RPS6KA4O75676 772 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 PDE4AP27815 886 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 RGS3P49796 1198 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 NUCB1Q02818 461 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 TRIM28Q13263 835 aaKnown RBP9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 MTX1Q13505 466 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 SLC27A3Q5K4L6 730 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 NLRP10Q86W26 655 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 SSH3Q8TE77 659 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 GCC1Q96CN9 775 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 DCTPP1Q9H773 170 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 CREBZFQ9NS37 354 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 UBR3Q6ZT12 1888 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 COL24A1Q17RW2 1714 aa9.31□□□□□ -0.92
PDXDC1-215ENST00000567306 H7C1W4 665 aa9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 SRGAP3O43295 1099 aa9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 APBA3O96018 575 aa9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 TXNRD1Q16881 649 aa9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 HSP90AB3PQ58FF7 597 aa9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 RTL5Q5HYW3 569 aaPredicted RBP9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 NPM2Q86SE8 214 aaKnown RBP9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 CHD1LQ86WJ1 897 aa9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 ZNF34Q8IZ26 560 aa9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 PELP1Q8IZL8 1130 aaKnown RBP9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 AK7Q96M32 723 aa9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 BCL2L12Q9HB09 334 aa9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 SRP68Q9UHB9 627 aaKnown RBP9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 EXOC6BQ9Y2D4 811 aa9.3□□□□□ -0.92
PDXDC1-215ENST00000567306 LAMB2P55268 1798 aa9.29□□□□□ -0.92
PDXDC1-215ENST00000567306 TUBGCP6Q96RT7 1819 aa9.29□□□□□ -0.92
PDXDC1-215ENST00000567306 PHF14O94880 888 aa9.29□□□□□ -0.92
PDXDC1-215ENST00000567306 FOXO4P98177 505 aa9.29□□□□□ -0.92
PDXDC1-215ENST00000567306 RABL6Q3YEC7 729 aaPredicted RBP9.29□□□□□ -0.92
PDXDC1-215ENST00000567306 KLHL34Q8N239 644 aa9.29□□□□□ -0.92
PDXDC1-215ENST00000567306 LNPKQ9C0E8 428 aa9.29□□□□□ -0.92
PDXDC1-215ENST00000567306 RTCBQ9Y3I0 505 aaKnown RBP9.29□□□□□ -0.92
PDXDC1-215ENST00000567306 APBB1O00213 710 aa9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 PLSCR1O15162 318 aa9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 SMARCA5O60264 1052 aaPredicted RBP9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 PCCAP05165 728 aaPredicted RBP9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 ZNF827Q17R98 1081 aa9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 ANKRD45Q5TZF3 282 aa9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 POTEHQ6S545 545 aa9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 SYNE4Q8N205 404 aa9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 ZBTB38Q8NAP3 1195 aaPredicted RBP9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 FAM89AQ96GI7 184 aa9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 NARFQ9UHQ1 456 aa9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 HDAC5Q9UQL6 1122 aa9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 ZNF652Q9Y2D9 606 aa9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 CDHR2Q9BYE9 1310 aa9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 USP42Q9H9J4 1324 aaKnown RBP9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 DDX60Q8IY21 1712 aaKnown RBP9.28□□□□□ -0.92
PDXDC1-215ENST00000567306 LRP5O75197 1615 aa9.27□□□□□ -0.92
PDXDC1-215ENST00000567306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.27□□□□□ -0.93
PDXDC1-215ENST00000567306 RFX5P48382 616 aaPredicted RBP9.27□□□□□ -0.93
PDXDC1-215ENST00000567306 SUSD4Q5VX71 490 aa9.27□□□□□ -0.93
PDXDC1-215ENST00000567306 USPL1Q5W0Q7 1092 aa9.27□□□□□ -0.93
PDXDC1-215ENST00000567306 OTUD7AQ8TE49 926 aaPredicted RBP9.27□□□□□ -0.93
PDXDC1-215ENST00000567306 ARHGEF1Q92888 912 aaKnown RBP9.27□□□□□ -0.93
PDXDC1-215ENST00000567306 PA2G4Q9UQ80 394 aaKnown RBP9.27□□□□□ -0.93
PDXDC1-215ENST00000567306 NIP7Q9Y221 180 aaKnown RBP eCLIP9.27□□□□□ -0.93
PDXDC1-215ENST00000567306 RGL2O15211 777 aa9.26□□□□□ -0.93
PDXDC1-215ENST00000567306 SURF6O75683 361 aaKnown RBP9.26□□□□□ -0.93
PDXDC1-215ENST00000567306 NTSR2O95665 410 aa9.26□□□□□ -0.93
PDXDC1-215ENST00000567306 PARP10Q53GL7 1025 aa9.26□□□□□ -0.93
PDXDC1-215ENST00000567306 TRAPPC3LQ5T215 181 aa9.26□□□□□ -0.93
PDXDC1-215ENST00000567306 TBC1D9BQ66K14 1250 aa9.26□□□□□ -0.93
PDXDC1-215ENST00000567306 LMBR1LQ6UX01 489 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms