RNA–Protein interactions for RNA: ENST00000567118.5

PKM-219, Transcript of pyruvate kinase M1/2, human

TSL 2

Gene PKM, Length 2,254 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-219	ENST00000567118	ATP8B2	P98198	1209 aa		14.01	□□□□□ -0.17
PKM-219	ENST00000567118	TSHZ3	Q63HK5	1081 aa		14.01	□□□□□ -0.17
PKM-219	ENST00000567118	IL1RAPL2	Q9NP60	686 aa		14.01	□□□□□ -0.17
PKM-219	ENST00000567118	CWC25	Q9NXE8	425 aa	Predicted RBP	14.01	□□□□□ -0.17
PKM-219	ENST00000567118	SURF6	O75683	361 aa	Known RBP	14	□□□□□ -0.17
PKM-219	ENST00000567118	TCIRG1	Q13488	830 aa		14	□□□□□ -0.17
PKM-219	ENST00000567118	CHD1L	Q86WJ1	897 aa		14	□□□□□ -0.17
PKM-219	ENST00000567118	CCDC24	Q8N4L8	307 aa		14	□□□□□ -0.17
PKM-219	ENST00000567118	UPF2	Q9HAU5	1272 aa	Known RBP	14	□□□□□ -0.17
PKM-219	ENST00000567118	MYH14	Q7Z406	1995 aa	Known RBP	14	□□□□□ -0.17
PKM-219	ENST00000567118	ANTXR1	Q9H6X2	564 aa		13.99	□□□□□ -0.17
PKM-219	ENST00000567118	DCTPP1	Q9H773	170 aa		13.99	□□□□□ -0.17
PKM-219	ENST00000567118	BTAF1	O14981	1849 aa		13.99	□□□□□ -0.17
PKM-219	ENST00000567118	LAMB4	A4D0S4	1761 aa		13.99	□□□□□ -0.17
PKM-219	ENST00000567118	NUCB1	Q02818	461 aa		13.99	□□□□□ -0.17
PKM-219	ENST00000567118	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.99	□□□□□ -0.17
PKM-219	ENST00000567118	PROM2	Q8N271	834 aa		13.99	□□□□□ -0.17
PKM-219	ENST00000567118	HMMR	O75330	724 aa		13.98	□□□□□ -0.17
PKM-219	ENST00000567118	PXDNL	A1KZ92	1463 aa		13.98	□□□□□ -0.17
PKM-219	ENST00000567118	OS9	Q13438	667 aa	Predicted RBP	13.98	□□□□□ -0.17
PKM-219	ENST00000567118	LMBR1L	Q6UX01	489 aa		13.98	□□□□□ -0.17
PKM-219	ENST00000567118	NUTM1	Q86Y26	1132 aa		13.98	□□□□□ -0.17
PKM-219	ENST00000567118	SLK	Q9H2G2	1235 aa	Predicted RBP	13.98	□□□□□ -0.17
PKM-219	ENST00000567118	TRMT112	Q9UI30	125 aa	Known RBP	13.98	□□□□□ -0.17
PKM-219	ENST00000567118	TJP1	Q07157	1748 aa		13.98	□□□□□ -0.17
PKM-219	ENST00000567118	UBN2	Q6ZU65	1347 aa		13.97	□□□□□ -0.17
PKM-219	ENST00000567118	USPL1	Q5W0Q7	1092 aa		13.97	□□□□□ -0.17
PKM-219	ENST00000567118	ILDR1	Q86SU0	546 aa	Predicted RBP	13.97	□□□□□ -0.17
PKM-219	ENST00000567118	GCC1	Q96CN9	775 aa		13.97	□□□□□ -0.17
PKM-219	ENST00000567118	TBC1D2	Q9BYX2	928 aa		13.97	□□□□□ -0.17
PKM-219	ENST00000567118	COL15A1	P39059	1388 aa		13.97	□□□□□ -0.17
PKM-219	ENST00000567118	CAMTA2	O94983	1202 aa		13.97	□□□□□ -0.17
PKM-219	ENST00000567118	NLRP10	Q86W26	655 aa		13.97	□□□□□ -0.17
PKM-219	ENST00000567118	AK7	Q96M32	723 aa		13.97	□□□□□ -0.17
PKM-219	ENST00000567118	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
PKM-219	ENST00000567118	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.97	□□□□□ -0.17
PKM-219	ENST00000567118	HCLS1	P14317	486 aa	Predicted RBP	13.96	□□□□□ -0.17
PKM-219	ENST00000567118	TXNRD1	Q16881	649 aa		13.96	□□□□□ -0.17
PKM-219	ENST00000567118	CCDC191	Q8NCU4	936 aa		13.96	□□□□□ -0.17
PKM-219	ENST00000567118	ARHGEF1	Q92888	912 aa	Known RBP	13.96	□□□□□ -0.17
PKM-219	ENST00000567118	ZNF594	Q96JF6	807 aa	Predicted RBP	13.96	□□□□□ -0.17
PKM-219	ENST00000567118	PKNOX2	Q96KN3	472 aa		13.96	□□□□□ -0.17
PKM-219	ENST00000567118	RTCB	Q9Y3I0	505 aa	Known RBP	13.96	□□□□□ -0.17
PKM-219	ENST00000567118	ISCA1	Q9BUE6	129 aa		13.95	□□□□□ -0.18
PKM-219	ENST00000567118	ARFGEF2	Q9Y6D5	1785 aa		13.95	□□□□□ -0.18
PKM-219	ENST00000567118	CASP7	P55210	303 aa		13.95	□□□□□ -0.18
PKM-219	ENST00000567118	SUSD4	Q5VX71	490 aa		13.95	□□□□□ -0.18
PKM-219	ENST00000567118	SSH3	Q8TE77	659 aa		13.95	□□□□□ -0.18
PKM-219	ENST00000567118		H7C1W4	665 aa		13.94	□□□□□ -0.18
PKM-219	ENST00000567118	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.94	□□□□□ -0.18
PKM-219	ENST00000567118	EN1	Q05925	392 aa	Predicted RBP	13.94	□□□□□ -0.18
PKM-219	ENST00000567118	UTY	O14607	1347 aa		13.94	□□□□□ -0.18
PKM-219	ENST00000567118	SBF2	Q86WG5	1849 aa		13.93	□□□□□ -0.18
PKM-219	ENST00000567118	ZPR1	O75312	459 aa		13.93	□□□□□ -0.18
PKM-219	ENST00000567118	RFC4	P35249	363 aa		13.93	□□□□□ -0.18
PKM-219	ENST00000567118	FOXO4	P98177	505 aa		13.93	□□□□□ -0.18
PKM-219	ENST00000567118	TBC1D9B	Q66K14	1250 aa		13.93	□□□□□ -0.18
PKM-219	ENST00000567118	NHS	Q6T4R5	1651 aa		13.93	□□□□□ -0.18
PKM-219	ENST00000567118	RPS6KA4	O75676	772 aa		13.93	□□□□□ -0.18
PKM-219	ENST00000567118	POLA2	Q14181	598 aa		13.93	□□□□□ -0.18
PKM-219	ENST00000567118	LRRCC1	Q9C099	1032 aa		13.93	□□□□□ -0.18
PKM-219	ENST00000567118	TRAPPC3L	Q5T215	181 aa		13.92	□□□□□ -0.18
PKM-219	ENST00000567118	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.92	□□□□□ -0.18
PKM-219	ENST00000567118	AFDN	P55196	1824 aa	Known RBP	13.92	□□□□□ -0.18
PKM-219	ENST00000567118	ERVV-1	B6SEH8	477 aa		13.92	□□□□□ -0.18
PKM-219	ENST00000567118	IRS4	O14654	1257 aa	Predicted RBP	13.92	□□□□□ -0.18
PKM-219	ENST00000567118	DEFB132	Q7Z7B7	95 aa		13.92	□□□□□ -0.18
PKM-219	ENST00000567118	ZNF34	Q8IZ26	560 aa		13.92	□□□□□ -0.18
PKM-219	ENST00000567118	C22orf23	Q9BZE7	217 aa		13.92	□□□□□ -0.18
PKM-219	ENST00000567118	BCL2L12	Q9HB09	334 aa		13.92	□□□□□ -0.18
PKM-219	ENST00000567118	TFCP2L1	Q9NZI6	479 aa		13.92	□□□□□ -0.18
PKM-219	ENST00000567118	CNTNAP4	Q9C0A0	1308 aa		13.91	□□□□□ -0.18
PKM-219	ENST00000567118	NPHP1	O15259	732 aa		13.9	□□□□□ -0.18
PKM-219	ENST00000567118	MAP4K4	O95819	1239 aa	Predicted RBP	13.9	□□□□□ -0.18
PKM-219	ENST00000567118	GTF2E1	P29083	439 aa	Predicted RBP	13.9	□□□□□ -0.18
PKM-219	ENST00000567118	EZH2	Q15910	746 aa	Known RBP	13.9	□□□□□ -0.18
PKM-219	ENST00000567118	ZNF827	Q17R98	1081 aa		13.9	□□□□□ -0.18
PKM-219	ENST00000567118	PLEKHM2	Q8IWE5	1019 aa		13.9	□□□□□ -0.18
PKM-219	ENST00000567118	RHPN1	Q8TCX5	695 aa		13.9	□□□□□ -0.18
PKM-219	ENST00000567118	MFAP1	P55081	439 aa	Known RBP	13.9	□□□□□ -0.18
PKM-219	ENST00000567118	HSP90AB3P	Q58FF7	597 aa		13.9	□□□□□ -0.18
PKM-219	ENST00000567118	PUS3	Q9BZE2	481 aa	Known RBP	13.9	□□□□□ -0.18
PKM-219	ENST00000567118	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.9	□□□□□ -0.18
PKM-219	ENST00000567118	PCCA	P05165	728 aa	Predicted RBP	13.89	□□□□□ -0.19
PKM-219	ENST00000567118	PTPN12	Q05209	780 aa	Known RBP	13.89	□□□□□ -0.19
PKM-219	ENST00000567118	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	6e-11	■■■□□ 18.3
PKM-219	ENST00000567118	LRRC24	Q50LG9	513 aa		13.89	□□□□□ -0.19
PKM-219	ENST00000567118	GREM2	Q9H772	168 aa		13.89	□□□□□ -0.19
PKM-219	ENST00000567118	NUP188	Q5SRE5	1749 aa		13.89	□□□□□ -0.19
PKM-219	ENST00000567118	SASH1	O94885	1247 aa		13.89	□□□□□ -0.19
PKM-219	ENST00000567118	ERFE	Q4G0M1	354 aa		13.89	□□□□□ -0.19
PKM-219	ENST00000567118	RC3H1	Q5TC82	1133 aa	Known RBP	13.89	□□□□□ -0.19
PKM-219	ENST00000567118	UTP14A	Q9BVJ6	771 aa	Known RBP	13.89	□□□□□ -0.19
PKM-219	ENST00000567118	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.89	□□□□□ -0.19
PKM-219	ENST00000567118	TRIM28	Q13263	835 aa	Known RBP	13.88	□□□□□ -0.19
PKM-219	ENST00000567118	MTX1	Q13505	466 aa		13.88	□□□□□ -0.19
PKM-219	ENST00000567118	NARF	Q9UHQ1	456 aa		13.88	□□□□□ -0.19
PKM-219	ENST00000567118	ZNF652	Q9Y2D9	606 aa		13.88	□□□□□ -0.19
PKM-219	ENST00000567118	RFX5	P48382	616 aa	Predicted RBP	13.88	□□□□□ -0.19
PKM-219	ENST00000567118	MSL1	Q68DK7	614 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms