RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 NFKBIEO00221 500 aa21.32■■□□□ 1
CLN6-208ENST00000567060 FLIIQ13045 1269 aa21.32■■□□□ 1
CLN6-208ENST00000567060 TTLL7Q6ZT98 887 aa21.32■■□□□ 1
CLN6-208ENST00000567060 PTPRCP08575 1304 aa21.31■■□□□ 1
CLN6-208ENST00000567060 RARSP54136 660 aaKnown RBP21.31■■□□□ 1
CLN6-208ENST00000567060 AIMP1Q12904 312 aaKnown RBP21.31■■□□□ 1
CLN6-208ENST00000567060 C2CD5Q86YS7 1000 aa21.31■■□□□ 1
CLN6-208ENST00000567060 SSH1Q8WYL5 1049 aa21.31■■□□□ 1
CLN6-208ENST00000567060 NUP98P52948 1817 aa21.3■■□□□ 1
CLN6-208ENST00000567060 KSR2Q6VAB6 950 aa21.3■■□□□ 1
CLN6-208ENST00000567060 MRPL50Q8N5N7 158 aaKnown RBP21.3■■□□□ 1
CLN6-208ENST00000567060 PHAXQ9H814 394 aaKnown RBP21.3■■□□□ 1
CLN6-208ENST00000567060 SMC4Q9NTJ3 1288 aa21.3■■□□□ 1
CLN6-208ENST00000567060 CARMIL3Q8ND23 1372 aa21.3■■□□□ 1
CLN6-208ENST00000567060 KIF16BQ96L93 1317 aa21.29■■□□□ 1
CLN6-208ENST00000567060 IBTKQ9P2D0 1353 aaPredicted RBP21.28■■□□□ 1
CLN6-208ENST00000567060 H0YIN7 160 aa21.28■■□□□ 1
CLN6-208ENST00000567060 HSPA1AP0DMV8 641 aaKnown RBP21.28■■□□□ 1
CLN6-208ENST00000567060 HSPA1BP0DMV9 641 aaKnown RBP21.28■■□□□ 1
CLN6-208ENST00000567060 RIC3Q7Z5B4 369 aa21.28■■□□□ 1
CLN6-208ENST00000567060 SETDB2Q96T68 719 aa21.28■■□□□ 1
CLN6-208ENST00000567060 ZBTB3Q9H5J0 574 aa21.28■■□□□ 1
CLN6-208ENST00000567060 TCERG1O14776 1098 aaKnown RBP21.27■■□□□ 1
CLN6-208ENST00000567060 FKBP5Q13451 457 aaPredicted RBP21.27■■□□□ 1
CLN6-208ENST00000567060 TCIRG1Q13488 830 aa21.27■■□□□ 1
CLN6-208ENST00000567060 PARP10Q53GL7 1025 aa21.27■■□□□ 1
CLN6-208ENST00000567060 ANKRD36CQ5JPF3 1778 aa21.27■■□□□ 1
CLN6-208ENST00000567060 DLEC1Q9Y238 1755 aa21.27■■□□□ 1
CLN6-208ENST00000567060 CCDC88AQ3V6T2 1871 aa21.26■□□□□ 0.99
CLN6-208ENST00000567060 ARFGEF2Q9Y6D5 1785 aa21.26■□□□□ 0.99
CLN6-208ENST00000567060 TRIM28Q13263 835 aaKnown RBP21.26■□□□□ 0.99
CLN6-208ENST00000567060 HLFQ16534 295 aa21.26■□□□□ 0.99
CLN6-208ENST00000567060 ZNF34Q8IZ26 560 aa21.26■□□□□ 0.99
CLN6-208ENST00000567060 ARHGAP45Q92619 1136 aa21.26■□□□□ 0.99
CLN6-208ENST00000567060 RNF123Q5XPI4 1314 aa21.26■□□□□ 0.99
CLN6-208ENST00000567060 PI4KAP2A4QPH2 592 aa21.25■□□□□ 0.99
CLN6-208ENST00000567060 IPO8O15397 1037 aaKnown RBP21.25■□□□□ 0.99
CLN6-208ENST00000567060 NEXNQ0ZGT2 675 aa21.25■□□□□ 0.99
CLN6-208ENST00000567060 TBC1D9BQ66K14 1250 aa21.25■□□□□ 0.99
CLN6-208ENST00000567060 BICDL1Q6ZP65 573 aa21.25■□□□□ 0.99
CLN6-208ENST00000567060 G2E3Q7L622 706 aa21.25■□□□□ 0.99
CLN6-208ENST00000567060 PI4KAP1Q8N8J0 262 aa21.25■□□□□ 0.99
CLN6-208ENST00000567060 METTL22Q9BUU2 404 aaPredicted RBP21.25■□□□□ 0.99
CLN6-208ENST00000567060 NYXQ9GZU5 481 aa21.24■□□□□ 0.99
CLN6-208ENST00000567060 NIP7Q9Y221 180 aaKnown RBP eCLIP21.24■□□□□ 0.99
CLN6-208ENST00000567060 DNAAF4Q8WXU2 420 aa21.23■□□□□ 0.99
CLN6-208ENST00000567060 API5Q9BZZ5 524 aaKnown RBP21.23■□□□□ 0.99
CLN6-208ENST00000567060 MAP3K2Q9Y2U5 619 aa21.23■□□□□ 0.99
CLN6-208ENST00000567060 C21orf2O43822 256 aa21.22■□□□□ 0.99
CLN6-208ENST00000567060 DPY19L2Q6NUT2 758 aa21.22■□□□□ 0.99
CLN6-208ENST00000567060 PPP1R42Q7Z4L9 355 aa21.22■□□□□ 0.99
CLN6-208ENST00000567060 CCDC24Q8N4L8 307 aa21.22■□□□□ 0.99
CLN6-208ENST00000567060 ZNF622Q969S3 477 aaKnown RBP eCLIP21.22■□□□□ 0.99
CLN6-208ENST00000567060 ISCA1Q9BUE6 129 aa21.22■□□□□ 0.99
CLN6-208ENST00000567060 BRIP1Q9BX63 1249 aa21.22■□□□□ 0.99
CLN6-208ENST00000567060 RCAN3Q9UKA8 241 aa21.22■□□□□ 0.99
CLN6-208ENST00000567060 TPTE2Q6XPS3 522 aa21.21■□□□□ 0.99
CLN6-208ENST00000567060 CCDC191Q8NCU4 936 aa21.21■□□□□ 0.99
CLN6-208ENST00000567060 BCL2L13Q9BXK5 485 aa21.21■□□□□ 0.99
CLN6-208ENST00000567060 ZNF219Q9P2Y4 722 aaPredicted RBP21.21■□□□□ 0.99
CLN6-208ENST00000567060 TIAM2Q8IVF5 1701 aa21.21■□□□□ 0.99
CLN6-208ENST00000567060 ERFEQ4G0M1 354 aa21.2■□□□□ 0.98
CLN6-208ENST00000567060 PRR5LQ6MZQ0 368 aa21.2■□□□□ 0.98
CLN6-208ENST00000567060 ANKRD31Q8N7Z5 1873 aa21.2■□□□□ 0.98
CLN6-208ENST00000567060 POTEIP0CG38 1075 aa21.19■□□□□ 0.98
CLN6-208ENST00000567060 POTEJP0CG39 1038 aa21.19■□□□□ 0.98
CLN6-208ENST00000567060 LINS1Q8NG48 757 aa21.19■□□□□ 0.98
CLN6-208ENST00000567060 PDZRN3Q9UPQ7 1066 aa21.19■□□□□ 0.98
CLN6-208ENST00000567060 HSP90B1P14625 803 aaKnown RBP21.18■□□□□ 0.98
CLN6-208ENST00000567060 PDE6BP35913 854 aa21.18■□□□□ 0.98
CLN6-208ENST00000567060 NLRP10Q86W26 655 aa21.18■□□□□ 0.98
CLN6-208ENST00000567060 NBPF5PQ86XG9 351 aaPredicted RBP21.18■□□□□ 0.98
CLN6-208ENST00000567060 CNBD1Q8NA66 436 aa21.18■□□□□ 0.98
CLN6-208ENST00000567060 MYD88Q99836 296 aa21.18■□□□□ 0.98
CLN6-208ENST00000567060 NOB1Q9ULX3 412 aaKnown RBP21.18■□□□□ 0.98
CLN6-208ENST00000567060 ALDH1L1O75891 902 aa21.17■□□□□ 0.98
CLN6-208ENST00000567060 ST5P78524 1137 aa21.17■□□□□ 0.98
CLN6-208ENST00000567060 ZKSCAN2Q63HK3 967 aa21.17■□□□□ 0.98
CLN6-208ENST00000567060 UTP14AQ9BVJ6 771 aaKnown RBP21.17■□□□□ 0.98
CLN6-208ENST00000567060 UBN2Q6ZU65 1347 aa21.17■□□□□ 0.98
CLN6-208ENST00000567060 RIC1Q4ADV7 1423 aa21.17■□□□□ 0.98
CLN6-208ENST00000567060 FER1L6Q2WGJ9 1857 aa21.16■□□□□ 0.98
CLN6-208ENST00000567060 LTBP3Q9NS15 1303 aa21.16■□□□□ 0.98
CLN6-208ENST00000567060 BCAR3O75815 825 aa21.16■□□□□ 0.98
CLN6-208ENST00000567060 DDNO94850 711 aaPredicted RBP21.16■□□□□ 0.98
CLN6-208ENST00000567060 MS4A1P11836 297 aa21.16■□□□□ 0.98
CLN6-208ENST00000567060 GPTP24298 496 aa21.16■□□□□ 0.98
CLN6-208ENST00000567060 CHADLQ6NUI6 762 aa21.16■□□□□ 0.98
CLN6-208ENST00000567060 ATF7IPQ6VMQ6 1270 aa21.16■□□□□ 0.98
CLN6-208ENST00000567060 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.16■□□□□ 0.98
CLN6-208ENST00000567060 CREBZFQ9NS37 354 aa21.16■□□□□ 0.98
CLN6-208ENST00000567060 CWC25Q9NXE8 425 aaPredicted RBP21.16■□□□□ 0.98
CLN6-208ENST00000567060 MKRN1Q9UHC7 482 aaKnown RBP21.16■□□□□ 0.98
CLN6-208ENST00000567060 NPHP1O15259 732 aa21.15■□□□□ 0.98
CLN6-208ENST00000567060 BEND3Q5T5X7 828 aa21.15■□□□□ 0.98
CLN6-208ENST00000567060 DICER1Q9UPY3 1922 aaKnown RBP21.15■□□□□ 0.98
CLN6-208ENST00000567060 NEURL1BA8MQ27 555 aa21.14■□□□□ 0.97
CLN6-208ENST00000567060 NTSR2O95665 410 aa21.14■□□□□ 0.97
CLN6-208ENST00000567060 GTF2E1P29083 439 aaPredicted RBP21.14■□□□□ 0.97
CLN6-208ENST00000567060 CCT4P50991 539 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms