RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 HLFQ16534 295 aa14.61□□□□□ -0.07
KARS-207ENST00000566560 GIGYF2Q6Y7W6 1299 aaKnown RBP14.61□□□□□ -0.07
KARS-207ENST00000566560 MAP3K2Q9Y2U5 619 aa14.61□□□□□ -0.07
KARS-207ENST00000566560 PI4KAP2A4QPH2 592 aa14.6□□□□□ -0.07
KARS-207ENST00000566560 HSP90AB3PQ58FF7 597 aa14.6□□□□□ -0.07
KARS-207ENST00000566560 CLEC4GQ6UXB4 293 aa14.6□□□□□ -0.07
KARS-207ENST00000566560 KSR2Q6VAB6 950 aa14.6□□□□□ -0.07
KARS-207ENST00000566560 NLGN1Q8N2Q7 840 aa14.6□□□□□ -0.07
KARS-207ENST00000566560 PI4KAP1Q8N8J0 262 aa14.6□□□□□ -0.07
KARS-207ENST00000566560 RNF25Q96BH1 459 aaPredicted RBP14.6□□□□□ -0.07
KARS-207ENST00000566560 NOB1Q9ULX3 412 aaKnown RBP14.6□□□□□ -0.07
KARS-207ENST00000566560 NRXN2Q9P2S2 1712 aa14.6□□□□□ -0.07
KARS-207ENST00000566560 CARMIL3Q8ND23 1372 aa14.6□□□□□ -0.07
KARS-207ENST00000566560 TBC1D9BQ66K14 1250 aa14.59□□□□□ -0.07
KARS-207ENST00000566560 BICDL1Q6ZP65 573 aa14.59□□□□□ -0.07
KARS-207ENST00000566560 DNAAF4Q8WXU2 420 aa14.59□□□□□ -0.07
KARS-207ENST00000566560 FRAT1Q92837 279 aaPredicted RBP14.59□□□□□ -0.07
KARS-207ENST00000566560 LRP5O75197 1615 aa14.59□□□□□ -0.07
KARS-207ENST00000566560 F6X3S4 739 aa14.58□□□□□ -0.08
KARS-207ENST00000566560 MMP10P09238 476 aa14.58□□□□□ -0.08
KARS-207ENST00000566560 GPTP24298 496 aa14.58□□□□□ -0.08
KARS-207ENST00000566560 NFIXQ14938 502 aa14.58□□□□□ -0.08
KARS-207ENST00000566560 METTL22Q9BUU2 404 aaPredicted RBP14.58□□□□□ -0.08
KARS-207ENST00000566560 API5Q9BZZ5 524 aaKnown RBP14.58□□□□□ -0.08
KARS-207ENST00000566560 NIP7Q9Y221 180 aaKnown RBP eCLIP14.58□□□□□ -0.08
KARS-207ENST00000566560 IPO8O15397 1037 aaKnown RBP14.57□□□□□ -0.08
KARS-207ENST00000566560 POLD1P28340 1107 aa14.57□□□□□ -0.08
KARS-207ENST00000566560 DDR1Q08345 913 aa14.57□□□□□ -0.08
KARS-207ENST00000566560 NEXNQ0ZGT2 675 aa14.57□□□□□ -0.08
KARS-207ENST00000566560 ZKSCAN2Q63HK3 967 aa14.57□□□□□ -0.08
KARS-207ENST00000566560 MYD88Q99836 296 aa14.57□□□□□ -0.08
KARS-207ENST00000566560 UBN2Q6ZU65 1347 aa14.57□□□□□ -0.08
KARS-207ENST00000566560 IBTKQ9P2D0 1353 aaPredicted RBP14.57□□□□□ -0.08
KARS-207ENST00000566560 LAMB2P55268 1798 aa14.57□□□□□ -0.08
KARS-207ENST00000566560 RIOK3O14730 519 aaKnown RBP14.56□□□□□ -0.08
KARS-207ENST00000566560 TCIRG1Q13488 830 aa14.56□□□□□ -0.08
KARS-207ENST00000566560 SLC4A10Q6U841 1118 aa14.56□□□□□ -0.08
KARS-207ENST00000566560 ATF7IPQ6VMQ6 1270 aa14.56□□□□□ -0.08
KARS-207ENST00000566560 ARHGAP45Q92619 1136 aa14.56□□□□□ -0.08
KARS-207ENST00000566560 SETDB2Q96T68 719 aa14.56□□□□□ -0.08
KARS-207ENST00000566560 SPON1Q9HCB6 807 aa14.56□□□□□ -0.08
KARS-207ENST00000566560 ATP5J2-PTCD1G3V325 749 aa14.55□□□□□ -0.08
KARS-207ENST00000566560 HAX1O00165 279 aa14.55□□□□□ -0.08
KARS-207ENST00000566560 POLRMTO00411 1230 aaKnown RBP14.55□□□□□ -0.08
KARS-207ENST00000566560 TRIM27P14373 513 aa14.55□□□□□ -0.08
KARS-207ENST00000566560 PARP10Q53GL7 1025 aa14.55□□□□□ -0.08
KARS-207ENST00000566560 ZNF34Q8IZ26 560 aa14.55□□□□□ -0.08
KARS-207ENST00000566560 ISCA1Q9BUE6 129 aa14.55□□□□□ -0.08
KARS-207ENST00000566560 PARP3Q9Y6F1 533 aa14.55□□□□□ -0.08
KARS-207ENST00000566560 ABCC4O15439 1325 aa14.55□□□□□ -0.08
KARS-207ENST00000566560 TM4SF1P30408 202 aa14.54□□□□□ -0.08
KARS-207ENST00000566560 NLRP10Q86W26 655 aa14.54□□□□□ -0.08
KARS-207ENST00000566560 FTSJ3Q8IY81 847 aaKnown RBP14.54□□□□□ -0.08
KARS-207ENST00000566560 TAOK2Q9UL54 1235 aa14.54□□□□□ -0.08
KARS-207ENST00000566560 TNRC6CQ9HCJ0 1690 aaKnown RBP14.54□□□□□ -0.08
KARS-207ENST00000566560 KIF13BQ9NQT8 1826 aa14.54□□□□□ -0.08
KARS-207ENST00000566560 ANKRD31Q8N7Z5 1873 aa14.53□□□□□ -0.08
KARS-207ENST00000566560 DDX60Q8IY21 1712 aaKnown RBP14.53□□□□□ -0.08
KARS-207ENST00000566560 C10orf71Q711Q0 1435 aa14.53□□□□□ -0.08
KARS-207ENST00000566560 FAM177BA6PVY3 158 aa14.53□□□□□ -0.08
KARS-207ENST00000566560 NEURL1BA8MQ27 555 aa14.53□□□□□ -0.08
KARS-207ENST00000566560 NPHP1O15259 732 aa14.53□□□□□ -0.08
KARS-207ENST00000566560 IGKV5-2P06315 115 aa14.53□□□□□ -0.08
KARS-207ENST00000566560 PTGER2P43116 358 aa14.53□□□□□ -0.08
KARS-207ENST00000566560 CWF19L2Q2TBE0 894 aaKnown RBP14.53□□□□□ -0.08
KARS-207ENST00000566560 BEND3Q5T5X7 828 aa14.53□□□□□ -0.08
KARS-207ENST00000566560 NBPF5PQ86XG9 351 aaPredicted RBP14.53□□□□□ -0.08
KARS-207ENST00000566560 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.53□□□□□ -0.08
KARS-207ENST00000566560 CNBD1Q8NA66 436 aa14.53□□□□□ -0.08
KARS-207ENST00000566560 LINS1Q8NG48 757 aa14.53□□□□□ -0.08
KARS-207ENST00000566560 SGIP1Q9BQI5 828 aa14.53□□□□□ -0.08
KARS-207ENST00000566560 CWC25Q9NXE8 425 aaPredicted RBP14.53□□□□□ -0.08
KARS-207ENST00000566560 TNNQ9UQP3 1299 aa14.53□□□□□ -0.08
KARS-207ENST00000566560 ABCC12Q96J65 1359 aa14.52□□□□□ -0.08
KARS-207ENST00000566560 NTSR2O95665 410 aa14.52□□□□□ -0.09
KARS-207ENST00000566560 SERPINB2P05120 415 aa14.52□□□□□ -0.09
KARS-207ENST00000566560 SUSD4Q5VX71 490 aa14.52□□□□□ -0.09
KARS-207ENST00000566560 PPP1R42Q7Z4L9 355 aa14.52□□□□□ -0.09
KARS-207ENST00000566560 CCDC191Q8NCU4 936 aa14.52□□□□□ -0.09
KARS-207ENST00000566560 CLUAP1Q96AJ1 413 aa14.52□□□□□ -0.09
KARS-207ENST00000566560 SRCIN1Q9C0H9 1055 aa14.52□□□□□ -0.09
KARS-207ENST00000566560 NYXQ9GZU5 481 aa14.52□□□□□ -0.09
KARS-207ENST00000566560 MYH3P11055 1940 aa14.51□□□□□ -0.09
KARS-207ENST00000566560 RNF123Q5XPI4 1314 aa14.51□□□□□ -0.09
KARS-207ENST00000566560 PLIN1O60240 522 aa14.51□□□□□ -0.09
KARS-207ENST00000566560 CENPBP07199 599 aaPredicted RBP14.51□□□□□ -0.09
KARS-207ENST00000566560 CCT4P50991 539 aaKnown RBP14.51□□□□□ -0.09
KARS-207ENST00000566560 RRP1P56182 461 aaKnown RBP14.51□□□□□ -0.09
KARS-207ENST00000566560 TRIM28Q13263 835 aaKnown RBP14.51□□□□□ -0.09
KARS-207ENST00000566560 PRR5LQ6MZQ0 368 aa14.51□□□□□ -0.09
KARS-207ENST00000566560 ZNF467Q7Z7K2 595 aaPredicted RBP14.51□□□□□ -0.09
KARS-207ENST00000566560 DZIP1LQ8IYY4 767 aaKnown RBP14.51□□□□□ -0.09
KARS-207ENST00000566560 ZNF579Q8NAF0 562 aaKnown RBP14.51□□□□□ -0.09
KARS-207ENST00000566560 KIF12Q96FN5 646 aa14.51□□□□□ -0.09
KARS-207ENST00000566560 UTP14AQ9BVJ6 771 aaKnown RBP14.51□□□□□ -0.09
KARS-207ENST00000566560 COL11A2P13942 1736 aaPredicted RBP14.51□□□□□ -0.09
KARS-207ENST00000566560 ALDH1L1O75891 902 aa14.5□□□□□ -0.09
KARS-207ENST00000566560 GTF2E1P29083 439 aaPredicted RBP14.5□□□□□ -0.09
KARS-207ENST00000566560 ST5P78524 1137 aa14.5□□□□□ -0.09
KARS-207ENST00000566560 NUTM1Q86Y26 1132 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms