RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 DCAF5Q96JK2 942 aa24.04■■□□□ 1.44
MSLN-205ENST00000563941 FAM227BQ96M60 508 aa24.04■■□□□ 1.44
MSLN-205ENST00000563941 TM6SF1Q9BZW5 370 aa24.04■■□□□ 1.44
MSLN-205ENST00000563941 TCHHQ07283 1943 aa24.03■■□□□ 1.44
MSLN-205ENST00000563941 PKD1L3Q7Z443 1732 aa24.03■■□□□ 1.44
MSLN-205ENST00000563941 NMIQ13287 307 aaPredicted RBP24.03■■□□□ 1.44
MSLN-205ENST00000563941 NECTIN1Q15223 517 aa24.03■■□□□ 1.44
MSLN-205ENST00000563941 LRP10Q7Z4F1 713 aa24.03■■□□□ 1.44
MSLN-205ENST00000563941 GDPD2Q9HCC8 539 aa24.03■■□□□ 1.44
MSLN-205ENST00000563941 PDRG1Q9NUG6 133 aa24.03■■□□□ 1.44
MSLN-205ENST00000563941 USP16Q9Y5T5 823 aa24.03■■□□□ 1.44
MSLN-205ENST00000563941 DCCP43146 1447 aa24.03■■□□□ 1.44
MSLN-205ENST00000563941 LARGE1O95461 756 aa24.02■■□□□ 1.44
MSLN-205ENST00000563941 ANKRD13DQ6ZTN6 518 aa24.02■■□□□ 1.44
MSLN-205ENST00000563941 ZSWIM6Q9HCJ5 1215 aa24.02■■□□□ 1.44
MSLN-205ENST00000563941 SMC3Q9UQE7 1217 aa24.02■■□□□ 1.44
MSLN-205ENST00000563941 AFDNP55196 1824 aaKnown RBP24.02■■□□□ 1.44
MSLN-205ENST00000563941 STRCP1A6NGW2 1772 aa24.02■■□□□ 1.44
MSLN-205ENST00000563941 PLEKHG2Q9H7P9 1386 aa24.02■■□□□ 1.44
MSLN-205ENST00000563941 CYP27B1O15528 508 aa24.02■■□□□ 1.44
MSLN-205ENST00000563941 ZSCAN22P10073 491 aaPredicted RBP24.02■■□□□ 1.44
MSLN-205ENST00000563941 CHRNA2Q15822 529 aa24.02■■□□□ 1.44
MSLN-205ENST00000563941 BOLA2Q9H3K6 86 aa24.02■■□□□ 1.44
MSLN-205ENST00000563941 RBM8AQ9Y5S9 174 aaKnown RBP24.02■■□□□ 1.44
MSLN-205ENST00000563941 CYP46A1Q9Y6A2 500 aa24.02■■□□□ 1.44
MSLN-205ENST00000563941 TNS3Q68CZ2 1445 aa24.01■■□□□ 1.43
MSLN-205ENST00000563941 USP48Q86UV5 1035 aa24.01■■□□□ 1.43
MSLN-205ENST00000563941 GADD45BO75293 160 aaPredicted RBP24.01■■□□□ 1.43
MSLN-205ENST00000563941 ZKSCAN1P17029 563 aaPredicted RBP24.01■■□□□ 1.43
MSLN-205ENST00000563941 PIP4K2AP48426 406 aaPredicted RBP24.01■■□□□ 1.43
MSLN-205ENST00000563941 SYAP1Q96A49 352 aaPredicted RBP24.01■■□□□ 1.43
MSLN-205ENST00000563941 STX6O43752 255 aa24■■□□□ 1.43
MSLN-205ENST00000563941 SYT1P21579 422 aa24■■□□□ 1.43
MSLN-205ENST00000563941 CREB3L3Q68CJ9 461 aa24■■□□□ 1.43
MSLN-205ENST00000563941 MAP4K1Q92918 833 aa24■■□□□ 1.43
MSLN-205ENST00000563941 FMNL2Q96PY5 1086 aa24■■□□□ 1.43
MSLN-205ENST00000563941 FSD1Q9BTV5 496 aa24■■□□□ 1.43
MSLN-205ENST00000563941 SNRKQ9NRH2 765 aa24■■□□□ 1.43
MSLN-205ENST00000563941 ARFGEF2Q9Y6D5 1785 aa24■■□□□ 1.43
MSLN-205ENST00000563941 ZSCAN31Q96LW9 406 aaPredicted RBP23.99■■□□□ 1.43
MSLN-205ENST00000563941 KCNJ4P48050 445 aa23.99■■□□□ 1.43
MSLN-205ENST00000563941 CCDC83Q8IWF9 413 aa23.99■■□□□ 1.43
MSLN-205ENST00000563941 TMEM87AQ8NBN3 555 aa23.99■■□□□ 1.43
MSLN-205ENST00000563941 A0A0D9SFI3 127 aa23.98■■□□□ 1.43
MSLN-205ENST00000563941 SH2B1Q9NRF2 756 aaPredicted RBP23.98■■□□□ 1.43
MSLN-205ENST00000563941 JARID2Q92833 1246 aaPredicted RBP23.98■■□□□ 1.43
MSLN-205ENST00000563941 PDLIM2Q96JY6 352 aa23.98■■□□□ 1.43
MSLN-205ENST00000563941 COPRSQ9NQ92 184 aa23.98■■□□□ 1.43
MSLN-205ENST00000563941 LAMB4A4D0S4 1761 aa23.97■■□□□ 1.43
MSLN-205ENST00000563941 HSPA2P54652 639 aa23.97■■□□□ 1.43
MSLN-205ENST00000563941 F13A1P00488 732 aa23.96■■□□□ 1.43
MSLN-205ENST00000563941 RFX5P48382 616 aaPredicted RBP23.96■■□□□ 1.43
MSLN-205ENST00000563941 ZSCAN30Q86W11 494 aa23.96■■□□□ 1.43
MSLN-205ENST00000563941 DDX54Q8TDD1 881 aaKnown RBP23.96■■□□□ 1.43
MSLN-205ENST00000563941 CNPY2Q9Y2B0 182 aa23.96■■□□□ 1.43
MSLN-205ENST00000563941 MED23Q9ULK4 1368 aa23.96■■□□□ 1.43
MSLN-205ENST00000563941 GLI3P10071 1580 aa23.96■■□□□ 1.43
MSLN-205ENST00000563941 SLC27A2O14975 620 aa23.96■■□□□ 1.43
MSLN-205ENST00000563941 GJB2P29033 226 aa23.96■■□□□ 1.43
MSLN-205ENST00000563941 CABP4P57796 275 aa23.96■■□□□ 1.43
MSLN-205ENST00000563941 UBE3BQ7Z3V4 1068 aa23.95■■□□□ 1.42
MSLN-205ENST00000563941 PARP4Q9UKK3 1724 aaKnown RBP23.95■■□□□ 1.42
MSLN-205ENST00000563941 PTPN12Q05209 780 aaKnown RBP23.95■■□□□ 1.42
MSLN-205ENST00000563941 RABL6Q3YEC7 729 aaPredicted RBP23.95■■□□□ 1.42
MSLN-205ENST00000563941 NAP1L5Q96NT1 182 aaPredicted RBP23.95■■□□□ 1.42
MSLN-205ENST00000563941 TSPY26PQ9H489 355 aa23.95■■□□□ 1.42
MSLN-205ENST00000563941 COL15A1P39059 1388 aa23.95■■□□□ 1.42
MSLN-205ENST00000563941 PHF14O94880 888 aa23.94■■□□□ 1.42
MSLN-205ENST00000563941 ST3GAL1Q11201 340 aa23.94■■□□□ 1.42
MSLN-205ENST00000563941 CADPS2Q86UW7 1296 aa23.94■■□□□ 1.42
MSLN-205ENST00000563941 SPATA31A3Q5VYP0 1347 aa23.94■■□□□ 1.42
MSLN-205ENST00000563941 PSMA5P28066 241 aa23.93■■□□□ 1.42
MSLN-205ENST00000563941 ME3Q16798 604 aa23.93■■□□□ 1.42
MSLN-205ENST00000563941 ATP6V1DQ9Y5K8 247 aa23.93■■□□□ 1.42
MSLN-205ENST00000563941 CPDO75976 1380 aa23.93■■□□□ 1.42
MSLN-205ENST00000563941 ATP5J2-PTCD1G3V325 749 aa23.93■■□□□ 1.42
MSLN-205ENST00000563941 PTCD1O75127 700 aaKnown RBP23.93■■□□□ 1.42
MSLN-205ENST00000563941 TFCP2Q12800 502 aa23.93■■□□□ 1.42
MSLN-205ENST00000563941 HS1BP3Q53T59 392 aa23.93■■□□□ 1.42
MSLN-205ENST00000563941 TNNI3KQ59H18 835 aa23.93■■□□□ 1.42
MSLN-205ENST00000563941 DBNLQ9UJU6 430 aaKnown RBP23.93■■□□□ 1.42
MSLN-205ENST00000563941 FPGT-TNNI3KV9GXZ4 949 aa23.93■■□□□ 1.42
MSLN-205ENST00000563941 RNF20Q5VTR2 975 aa23.92■■□□□ 1.42
MSLN-205ENST00000563941 RNF214Q8ND24 703 aa23.92■■□□□ 1.42
MSLN-205ENST00000563941 JCADQ9P266 1359 aa23.92■■□□□ 1.42
MSLN-205ENST00000563941 A0A087WZG4 1122 aa23.92■■□□□ 1.42
MSLN-205ENST00000563941 ATP5JP18859 108 aa23.92■■□□□ 1.42
MSLN-205ENST00000563941 PLBD2Q8NHP8 589 aa23.92■■□□□ 1.42
MSLN-205ENST00000563941 EDC3Q96F86 508 aaKnown RBP23.92■■□□□ 1.42
MSLN-205ENST00000563941 ZNF589Q86UQ0 364 aaPredicted RBP23.91■■□□□ 1.42
MSLN-205ENST00000563941 TPCN1Q9ULQ1 816 aa23.91■■□□□ 1.42
MSLN-205ENST00000563941 MTMR6Q9Y217 621 aa23.91■■□□□ 1.42
MSLN-205ENST00000563941 DTNBO60941 627 aa23.9■■□□□ 1.42
MSLN-205ENST00000563941 NECAB1Q8N987 351 aa23.9■■□□□ 1.42
MSLN-205ENST00000563941 MSNP26038 577 aaKnown RBP23.89■■□□□ 1.42
MSLN-205ENST00000563941 CASP7P55210 303 aa23.89■■□□□ 1.42
MSLN-205ENST00000563941 UBE2HP62256 183 aa23.89■■□□□ 1.42
MSLN-205ENST00000563941 COL9A3Q14050 684 aaPredicted RBP23.89■■□□□ 1.42
MSLN-205ENST00000563941 BLOC1S2Q6QNY1 142 aa23.89■■□□□ 1.42
MSLN-205ENST00000563941 FIBPO43427 364 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms