RNA–Protein interactions for RNA: ENST00000562789.5

COMMD4-207, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-207ENST00000562789 ZNF784Q8NCA9 323 aaPredicted RBP20.77■□□□□ 0.92
COMMD4-207ENST00000562789 MASTLQ96GX5 879 aa20.77■□□□□ 0.92
COMMD4-207ENST00000562789 SPINK5Q9NQ38 1064 aaPredicted RBP20.77■□□□□ 0.92
COMMD4-207ENST00000562789 ZNF219Q9P2Y4 722 aaPredicted RBP20.77■□□□□ 0.92
COMMD4-207ENST00000562789 DICER1Q9UPY3 1922 aaKnown RBP20.76■□□□□ 0.91
COMMD4-207ENST00000562789 TCIRG1Q13488 830 aa20.76■□□□□ 0.91
COMMD4-207ENST00000562789 RIC3Q7Z5B4 369 aa20.76■□□□□ 0.91
COMMD4-207ENST00000562789 CNKSR1Q969H4 720 aa20.76■□□□□ 0.91
COMMD4-207ENST00000562789 UTP14AQ9BVJ6 771 aaKnown RBP20.76■□□□□ 0.91
COMMD4-207ENST00000562789 ADCY9O60503 1353 aa20.75■□□□□ 0.91
COMMD4-207ENST00000562789 NPR1P16066 1061 aa20.75■□□□□ 0.91
COMMD4-207ENST00000562789 EXOSC9Q06265 439 aaKnown RBP20.75■□□□□ 0.91
COMMD4-207ENST00000562789 NLRP10Q86W26 655 aa20.75■□□□□ 0.91
COMMD4-207ENST00000562789 ZNF428Q96B54 188 aa20.75■□□□□ 0.91
COMMD4-207ENST00000562789 ZNF521Q96K83 1311 aa20.75■□□□□ 0.91
COMMD4-207ENST00000562789 PRPF40BQ6NWY9 871 aaKnown RBP20.74■□□□□ 0.91
COMMD4-207ENST00000562789 MIER1Q8N108 512 aa20.74■□□□□ 0.91
COMMD4-207ENST00000562789 DDX58O95786 925 aaKnown RBP20.73■□□□□ 0.91
COMMD4-207ENST00000562789 RASSF7Q02833 373 aa20.73■□□□□ 0.91
COMMD4-207ENST00000562789 TRMT112Q9UI30 125 aaKnown RBP20.73■□□□□ 0.91
COMMD4-207ENST00000562789 RNF123Q5XPI4 1314 aa20.73■□□□□ 0.91
COMMD4-207ENST00000562789 TAF1P21675 1872 aa20.73■□□□□ 0.91
COMMD4-207ENST00000562789 MYH3P11055 1940 aa20.72■□□□□ 0.91
COMMD4-207ENST00000562789 KLRG2A4D1S0 409 aaPredicted RBP20.72■□□□□ 0.91
COMMD4-207ENST00000562789 ATP5J2-PTCD1G3V325 749 aa20.72■□□□□ 0.91
COMMD4-207ENST00000562789 C21orf2O43822 256 aa20.72■□□□□ 0.91
COMMD4-207ENST00000562789 RPGRQ92834 1020 aaKnown RBP20.72■□□□□ 0.91
COMMD4-207ENST00000562789 SH3TC1Q8TE82 1336 aa20.71■□□□□ 0.91
COMMD4-207ENST00000562789 SLC4A2P04920 1241 aa20.7■□□□□ 0.9
COMMD4-207ENST00000562789 CRY2Q49AN0 593 aa20.7■□□□□ 0.9
COMMD4-207ENST00000562789 MYD88Q99836 296 aa20.7■□□□□ 0.9
COMMD4-207ENST00000562789 ISCA1Q9BUE6 129 aa20.7■□□□□ 0.9
COMMD4-207ENST00000562789 VAMP4O75379 141 aa20.69■□□□□ 0.9
COMMD4-207ENST00000562789 C9orf131Q5VYM1 1079 aa20.69■□□□□ 0.9
COMMD4-207ENST00000562789 ZNF526Q8TF50 670 aaPredicted RBP20.69■□□□□ 0.9
COMMD4-207ENST00000562789 NLRP3Q96P20 1036 aa20.69■□□□□ 0.9
COMMD4-207ENST00000562789 RNF181Q9P0P0 153 aa20.69■□□□□ 0.9
COMMD4-207ENST00000562789 ALDH1B1P30837 517 aa20.68■□□□□ 0.9
COMMD4-207ENST00000562789 C3orf67Q6ZVT6 689 aa20.68■□□□□ 0.9
COMMD4-207ENST00000562789 G2E3Q7L622 706 aa20.68■□□□□ 0.9
COMMD4-207ENST00000562789 MAP3K2Q9Y2U5 619 aa20.68■□□□□ 0.9
COMMD4-207ENST00000562789 E9PSI1 815 aa20.67■□□□□ 0.9
COMMD4-207ENST00000562789 NFKBIEO00221 500 aa20.67■□□□□ 0.9
COMMD4-207ENST00000562789 HCLS1P14317 486 aaPredicted RBP20.67■□□□□ 0.9
COMMD4-207ENST00000562789 RTL5Q5HYW3 569 aaPredicted RBP20.67■□□□□ 0.9
COMMD4-207ENST00000562789 SOGA3Q5TF21 947 aa20.67■□□□□ 0.9
COMMD4-207ENST00000562789 SYNE4Q8N205 404 aa20.67■□□□□ 0.9
COMMD4-207ENST00000562789 PI4KAP2A4QPH2 592 aa20.66■□□□□ 0.9
COMMD4-207ENST00000562789 FLIIQ13045 1269 aa20.66■□□□□ 0.9
COMMD4-207ENST00000562789 SLC10A5Q5PT55 438 aa20.66■□□□□ 0.9
COMMD4-207ENST00000562789 KSR2Q6VAB6 950 aa20.66■□□□□ 0.9
COMMD4-207ENST00000562789 PI4KAP1Q8N8J0 262 aa20.66■□□□□ 0.9
COMMD4-207ENST00000562789 FAM89AQ96GI7 184 aa20.66■□□□□ 0.9
COMMD4-207ENST00000562789 RBM17Q96I25 401 aaKnown RBP20.66■□□□□ 0.9
COMMD4-207ENST00000562789 METTL22Q9BUU2 404 aaPredicted RBP20.66■□□□□ 0.9
COMMD4-207ENST00000562789 SPEF2Q9C093 1822 aa20.66■□□□□ 0.9
COMMD4-207ENST00000562789 FKBP5Q13451 457 aaPredicted RBP20.65■□□□□ 0.9
COMMD4-207ENST00000562789 CCDC93Q567U6 631 aa20.65■□□□□ 0.9
COMMD4-207ENST00000562789 LMNB1P20700 586 aa20.64■□□□□ 0.89
COMMD4-207ENST00000562789 NEXNQ0ZGT2 675 aa20.64■□□□□ 0.89
COMMD4-207ENST00000562789 TRIM28Q13263 835 aaKnown RBP20.64■□□□□ 0.89
COMMD4-207ENST00000562789 TAOK3Q9H2K8 898 aa20.64■□□□□ 0.89
COMMD4-207ENST00000562789 GPBP1L1Q9HC44 474 aaPredicted RBP20.64■□□□□ 0.89
COMMD4-207ENST00000562789 HOXA10P31260 410 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-207ENST00000562789 OLFM4Q6UX06 510 aa20.63■□□□□ 0.89
COMMD4-207ENST00000562789 CCDC191Q8NCU4 936 aa20.63■□□□□ 0.89
COMMD4-207ENST00000562789 CWC25Q9NXE8 425 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-207ENST00000562789 LRRC37AA6NMS7 1700 aa20.62■□□□□ 0.89
COMMD4-207ENST00000562789 LTBP3Q9NS15 1303 aa20.62■□□□□ 0.89
COMMD4-207ENST00000562789 PPEF1O14829 653 aaPredicted RBP20.62■□□□□ 0.89
COMMD4-207ENST00000562789 SLFN5Q08AF3 891 aa20.62■□□□□ 0.89
COMMD4-207ENST00000562789 CDCA7LQ96GN5 454 aa20.62■□□□□ 0.89
COMMD4-207ENST00000562789 CRAMP1Q96RY5 1269 aa20.62■□□□□ 0.89
COMMD4-207ENST00000562789 ABCC4O15439 1325 aa20.61■□□□□ 0.89
COMMD4-207ENST00000562789 PRELPP51888 382 aa20.61■□□□□ 0.89
COMMD4-207ENST00000562789 C7orf43Q8WVR3 580 aa20.61■□□□□ 0.89
COMMD4-207ENST00000562789 IRS4O14654 1257 aaPredicted RBP20.6■□□□□ 0.89
COMMD4-207ENST00000562789 DDX46Q7L014 1031 aaKnown RBP20.6■□□□□ 0.89
COMMD4-207ENST00000562789 ZBTB38Q8NAP3 1195 aaPredicted RBP20.6■□□□□ 0.89
COMMD4-207ENST00000562789 IGKV5-2P06315 115 aa20.59■□□□□ 0.89
COMMD4-207ENST00000562789 CWF19L2Q2TBE0 894 aaKnown RBP20.59■□□□□ 0.89
COMMD4-207ENST00000562789 DNAAF4Q8WXU2 420 aa20.59■□□□□ 0.89
COMMD4-207ENST00000562789 ZC3H4Q9UPT8 1303 aaKnown RBP20.58■□□□□ 0.89
COMMD4-207ENST00000562789 COL4A1P02462 1669 aa20.58■□□□□ 0.89
COMMD4-207ENST00000562789 PCCAP05165 728 aaPredicted RBP20.58■□□□□ 0.89
COMMD4-207ENST00000562789 RTKN2Q8IZC4 609 aa20.58■□□□□ 0.89
COMMD4-207ENST00000562789 JARID2Q92833 1246 aaPredicted RBP20.58■□□□□ 0.89
COMMD4-207ENST00000562789 SNED1Q8TER0 1413 aa20.58■□□□□ 0.88
COMMD4-207ENST00000562789 NEURL1BA8MQ27 555 aa20.57■□□□□ 0.88
COMMD4-207ENST00000562789 HSP90B1P14625 803 aaKnown RBP20.57■□□□□ 0.88
COMMD4-207ENST00000562789 FKBP4Q02790 459 aaKnown RBP eCLIP20.57■□□□□ 0.88
COMMD4-207ENST00000562789 SLC51AQ86UW1 340 aa20.57■□□□□ 0.88
COMMD4-207ENST00000562789 TMX4Q9H1E5 349 aaPredicted RBP20.57■□□□□ 0.88
COMMD4-207ENST00000562789 HNRNPUQ00839 825 aaKnown RBP eCLIP20.56■□□□□ 0.88
COMMD4-207ENST00000562789 GRAPQ13588 217 aa20.56■□□□□ 0.88
COMMD4-207ENST00000562789 CC2D2BQ6DHV5 1058 aa20.56■□□□□ 0.88
COMMD4-207ENST00000562789 GRAPLQ8TC17 118 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-207ENST00000562789 KDM2BQ8NHM5 1336 aa20.55■□□□□ 0.88
COMMD4-207ENST00000562789 F6X3S4 739 aa20.55■□□□□ 0.88
COMMD4-207ENST00000562789 ZNF277Q9NRM2 450 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms