RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 NTSR2O95665 410 aa24.05■■□□□ 1.44
PKD1-223ENST00000561668 LMNB1P20700 586 aa24.05■■□□□ 1.44
PKD1-223ENST00000561668 TSPYL6Q8N831 410 aa24.05■■□□□ 1.44
PKD1-223ENST00000561668 NLRP3Q96P20 1036 aa24.05■■□□□ 1.44
PKD1-223ENST00000561668 TRMT112Q9UI30 125 aaKnown RBP24.05■■□□□ 1.44
PKD1-223ENST00000561668 ADCY9O60503 1353 aa24.04■■□□□ 1.44
PKD1-223ENST00000561668 DDX58O95786 925 aaKnown RBP24.04■■□□□ 1.44
PKD1-223ENST00000561668 TWISTNBQ3B726 338 aaPredicted RBP24.04■■□□□ 1.44
PKD1-223ENST00000561668 NLRP10Q86W26 655 aa24.04■■□□□ 1.44
PKD1-223ENST00000561668 MYH16Q9H6N6 1097 aa24.04■■□□□ 1.44
PKD1-223ENST00000561668 RNF123Q5XPI4 1314 aa24.04■■□□□ 1.44
PKD1-223ENST00000561668 RASSF7Q02833 373 aa24.03■■□□□ 1.44
PKD1-223ENST00000561668 TRMT2AQ8IZ69 625 aaKnown RBP24.03■■□□□ 1.44
PKD1-223ENST00000561668 SLC10A5Q5PT55 438 aa24.02■■□□□ 1.44
PKD1-223ENST00000561668 RBM17Q96I25 401 aaKnown RBP24.02■■□□□ 1.44
PKD1-223ENST00000561668 PHAXQ9H814 394 aaKnown RBP24.02■■□□□ 1.44
PKD1-223ENST00000561668 SLFN5Q08AF3 891 aa24.01■■□□□ 1.43
PKD1-223ENST00000561668 CRY2Q49AN0 593 aa24.01■■□□□ 1.43
PKD1-223ENST00000561668 COL11A2P13942 1736 aaPredicted RBP24.01■■□□□ 1.43
PKD1-223ENST00000561668 E9PSI1 815 aa24■■□□□ 1.43
PKD1-223ENST00000561668 VAMP4O75379 141 aa24■■□□□ 1.43
PKD1-223ENST00000561668 TMX4Q9H1E5 349 aaPredicted RBP24■■□□□ 1.43
PKD1-223ENST00000561668 TAOK3Q9H2K8 898 aa24■■□□□ 1.43
PKD1-223ENST00000561668 SH3TC1Q8TE82 1336 aa24■■□□□ 1.43
PKD1-223ENST00000561668 ABCC12Q96J65 1359 aa24■■□□□ 1.43
PKD1-223ENST00000561668 ATP5J2-PTCD1G3V325 749 aa23.99■■□□□ 1.43
PKD1-223ENST00000561668 CCDC93Q567U6 631 aa23.99■■□□□ 1.43
PKD1-223ENST00000561668 NFKBIEO00221 500 aa23.98■■□□□ 1.43
PKD1-223ENST00000561668 HOXA10P31260 410 aaPredicted RBP23.98■■□□□ 1.43
PKD1-223ENST00000561668 EXOSC9Q06265 439 aaKnown RBP23.98■■□□□ 1.43
PKD1-223ENST00000561668 RTKN2Q8IZC4 609 aa23.98■■□□□ 1.43
PKD1-223ENST00000561668 ISCA1Q9BUE6 129 aa23.98■■□□□ 1.43
PKD1-223ENST00000561668 KDM2BQ8NHM5 1336 aa23.98■■□□□ 1.43
PKD1-223ENST00000561668 RIC1Q4ADV7 1423 aa23.98■■□□□ 1.43
PKD1-223ENST00000561668 SLX4Q8IY92 1834 aa23.98■■□□□ 1.43
PKD1-223ENST00000561668 TCERG1O14776 1098 aaKnown RBP23.97■■□□□ 1.43
PKD1-223ENST00000561668 SLC4A2P04920 1241 aa23.97■■□□□ 1.43
PKD1-223ENST00000561668 C7orf43Q8WVR3 580 aa23.97■■□□□ 1.43
PKD1-223ENST00000561668 CRAMP1Q96RY5 1269 aa23.97■■□□□ 1.43
PKD1-223ENST00000561668 CACNA1SQ13698 1873 aa23.96■■□□□ 1.43
PKD1-223ENST00000561668 ANKRD36CQ5JPF3 1778 aa23.96■■□□□ 1.43
PKD1-223ENST00000561668 ZC3H4Q9UPT8 1303 aaKnown RBP23.96■■□□□ 1.43
PKD1-223ENST00000561668 HCLS1P14317 486 aaPredicted RBP23.96■■□□□ 1.43
PKD1-223ENST00000561668 C1QTNF8P60827 252 aa23.96■■□□□ 1.43
PKD1-223ENST00000561668 TRIM28Q13263 835 aaKnown RBP23.96■■□□□ 1.43
PKD1-223ENST00000561668 SBF1O95248 1867 aa23.96■■□□□ 1.43
PKD1-223ENST00000561668 LTBP3Q9NS15 1303 aa23.95■■□□□ 1.42
PKD1-223ENST00000561668 CC2D2BQ6DHV5 1058 aa23.95■■□□□ 1.42
PKD1-223ENST00000561668 ZNF428Q96B54 188 aa23.95■■□□□ 1.42
PKD1-223ENST00000561668 MYD88Q99836 296 aa23.95■■□□□ 1.42
PKD1-223ENST00000561668 HSP90B1P14625 803 aaKnown RBP23.94■■□□□ 1.42
PKD1-223ENST00000561668 DPY19L2Q6NUT2 758 aa23.94■■□□□ 1.42
PKD1-223ENST00000561668 KSR2Q6VAB6 950 aa23.94■■□□□ 1.42
PKD1-223ENST00000561668 FAM89AQ96GI7 184 aa23.94■■□□□ 1.42
PKD1-223ENST00000561668 NEXNQ0ZGT2 675 aa23.93■■□□□ 1.42
PKD1-223ENST00000561668 GRIPAP1Q4V328 841 aa23.93■■□□□ 1.42
PKD1-223ENST00000561668 DDX46Q7L014 1031 aaKnown RBP23.93■■□□□ 1.42
PKD1-223ENST00000561668 SYNE4Q8N205 404 aa23.93■■□□□ 1.42
PKD1-223ENST00000561668 CDCA7LQ96GN5 454 aa23.93■■□□□ 1.42
PKD1-223ENST00000561668 METTL22Q9BUU2 404 aaPredicted RBP23.93■■□□□ 1.42
PKD1-223ENST00000561668 MAP3K2Q9Y2U5 619 aa23.93■■□□□ 1.42
PKD1-223ENST00000561668 ARFGEF2Q9Y6D5 1785 aa23.93■■□□□ 1.42
PKD1-223ENST00000561668 FKBP4Q02790 459 aaKnown RBP eCLIP23.92■■□□□ 1.42
PKD1-223ENST00000561668 RTL5Q5HYW3 569 aaPredicted RBP23.92■■□□□ 1.42
PKD1-223ENST00000561668 C3orf67Q6ZVT6 689 aa23.92■■□□□ 1.42
PKD1-223ENST00000561668 CCDC191Q8NCU4 936 aa23.92■■□□□ 1.42
PKD1-223ENST00000561668 CACNA1FO60840 1977 aa23.92■■□□□ 1.42
PKD1-223ENST00000561668 TNRC6CQ9HCJ0 1690 aaKnown RBP23.92■■□□□ 1.42
PKD1-223ENST00000561668 PI4KAP2A4QPH2 592 aa23.91■■□□□ 1.42
PKD1-223ENST00000561668 PPEF1O14829 653 aaPredicted RBP23.91■■□□□ 1.42
PKD1-223ENST00000561668 PRELPP51888 382 aa23.91■■□□□ 1.42
PKD1-223ENST00000561668 C16orf71Q8IYS4 520 aaPredicted RBP23.91■■□□□ 1.42
PKD1-223ENST00000561668 PI4KAP1Q8N8J0 262 aa23.91■■□□□ 1.42
PKD1-223ENST00000561668 FER1L6Q2WGJ9 1857 aa23.9■■□□□ 1.42
PKD1-223ENST00000561668 BBOX1O75936 387 aa23.9■■□□□ 1.42
PKD1-223ENST00000561668 OLFM4Q6UX06 510 aa23.9■■□□□ 1.42
PKD1-223ENST00000561668 ZBTB38Q8NAP3 1195 aaPredicted RBP23.9■■□□□ 1.42
PKD1-223ENST00000561668 CWC25Q9NXE8 425 aaPredicted RBP23.9■■□□□ 1.42
PKD1-223ENST00000561668 CCDC88AQ3V6T2 1871 aa23.9■■□□□ 1.42
PKD1-223ENST00000561668 GLTPD2A6NH11 291 aa23.89■■□□□ 1.41
PKD1-223ENST00000561668 NMRK2Q9NPI5 230 aa23.89■■□□□ 1.41
PKD1-223ENST00000561668 IRS4O14654 1257 aaPredicted RBP23.88■■□□□ 1.41
PKD1-223ENST00000561668 RRAGCQ9HB90 399 aa23.88■■□□□ 1.41
PKD1-223ENST00000561668 KIF3CO14782 793 aa23.87■■□□□ 1.41
PKD1-223ENST00000561668 HNRNPUQ00839 825 aaKnown RBP eCLIP23.87■■□□□ 1.41
PKD1-223ENST00000561668 FLIIQ13045 1269 aa23.87■■□□□ 1.41
PKD1-223ENST00000561668 FKBP5Q13451 457 aaPredicted RBP23.87■■□□□ 1.41
PKD1-223ENST00000561668 G2E3Q7L622 706 aa23.87■■□□□ 1.41
PKD1-223ENST00000561668 ZNF277Q9NRM2 450 aaPredicted RBP23.87■■□□□ 1.41
PKD1-223ENST00000561668 ABCC4O15439 1325 aa23.86■■□□□ 1.41
PKD1-223ENST00000561668 CT47B1P0C2W7 299 aaPredicted RBP23.86■■□□□ 1.41
PKD1-223ENST00000561668 PSMD1Q99460 953 aa23.86■■□□□ 1.41
PKD1-223ENST00000561668 ATP6V0A2Q9Y487 856 aa23.86■■□□□ 1.41
PKD1-223ENST00000561668 ZBED9Q6R2W3 1325 aa23.85■■□□□ 1.41
PKD1-223ENST00000561668 TOMM70O94826 608 aa23.85■■□□□ 1.41
PKD1-223ENST00000561668 PCCAP05165 728 aaPredicted RBP23.85■■□□□ 1.41
PKD1-223ENST00000561668 SF3B3Q15393 1217 aaKnown RBP23.85■■□□□ 1.41
PKD1-223ENST00000561668 IARSP41252 1262 aaKnown RBP23.84■■□□□ 1.41
PKD1-223ENST00000561668 GRAPQ13588 217 aa23.84■■□□□ 1.41
PKD1-223ENST00000561668 TMC4Q7Z404 712 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms