RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 RBSNQ9H1K0 784 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 SLC12A7Q9Y666 1083 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 OGFRQ9NZT2 677 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 TMCO5BA8MYB1 307 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 HSF2BPO75031 334 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 ZC3H6P61129 1189 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 ABCF2Q9UG63 623 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 USP16Q9Y5T5 823 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 F13A1P00488 732 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 HS1BP3Q53T59 392 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 CCDC91Q7Z6B0 441 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 LRRC2Q9BYS8 371 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 UBA5Q9GZZ9 404 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 GCOM1H8Y6P7 765 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 PHACTR2O75167 634 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 MYZAPP0CAP1 466 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 METTL24Q5JXM2 366 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 SMC5Q8IY18 1101 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 TSG101Q99816 390 aa11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 FAM83GA6ND36 823 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 ZNF213O14771 459 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 SYT1P21579 422 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 HAND2P61296 217 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 TYRO3Q06418 890 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 C17orf53Q8N3J3 647 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 SCLT1Q96NL6 688 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 MBIPQ9NS73 344 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 CTAGE15A4D2H0 777 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 CTAGE8P0CG41 777 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 CTAGE6Q86UF2 777 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 CTAGE4Q8IX94 777 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 CTNNBL1Q8WYA6 563 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 SYT10Q6XYQ8 523 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 NEK1Q96PY6 1258 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 U2AF2P26368 475 aaKnown RBP eCLIP11.74□□□□□ -0.531e-6■■■□□ 17.9
GTF3C1-202ENST00000561623 CAVIN2O95810 425 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 PRPF4BQ13523 1007 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 USHBP1Q8N6Y0 703 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 DRC1Q96MC2 740 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 NAA15Q9BXJ9 866 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 ECHDC1Q9NTX5 307 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 ORC3Q9UBD5 711 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 NAPBQ9H115 298 aa11.74□□□□□ -0.53
GTF3C1-202ENST00000561623 TTC31Q49AM3 519 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-202ENST00000561623 CDK13Q14004 1512 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-202ENST00000561623 FLIIQ13045 1269 aa11.73□□□□□ -0.53
GTF3C1-202ENST00000561623 NME9Q86XW9 330 aa11.73□□□□□ -0.53
GTF3C1-202ENST00000561623 ZNF76P36508 570 aa11.73□□□□□ -0.53
GTF3C1-202ENST00000561623 CCDC102BQ68D86 513 aa11.73□□□□□ -0.53
GTF3C1-202ENST00000561623 MYO1BO43795 1136 aa11.73□□□□□ -0.53
GTF3C1-202ENST00000561623 ESYT1Q9BSJ8 1104 aa11.73□□□□□ -0.53
GTF3C1-202ENST00000561623 HECW1Q76N89 1606 aa11.73□□□□□ -0.53
GTF3C1-202ENST00000561623 MACROD2A1Z1Q3 448 aa11.73□□□□□ -0.53
GTF3C1-202ENST00000561623 IFIT3O14879 490 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-202ENST00000561623 PUF60Q9UHX1 559 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-202ENST00000561623 N4BP3O15049 544 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 SYKP43405 635 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 CC2D2AQ9P2K1 1620 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 PTPRCP08575 1304 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 KARSQ15046 597 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 CEP112Q8N8E3 955 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 TTC16Q8NEE8 873 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 BRF1Q92994 677 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 GOLIM4O00461 696 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 PPP1R42Q7Z4L9 355 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 ATRIPQ8WXE1 791 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 PCF11O94913 1555 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 HSPA4P34932 840 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 MICU3Q86XE3 530 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 GOLGA1Q92805 767 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 RLBP1P12271 317 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 NOP2P46087 812 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 VPS36Q86VN1 386 aa11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 ZSCAN16Q9H4T2 348 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 PHAXQ9H814 394 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-202ENST00000561623 RANBP6O60518 1105 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 LMOD1P29536 600 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 KRBA2Q6ZNG9 492 aa11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 MEIS3Q99687 375 aa11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 TROQ12816 1431 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 DNAJC21Q5F1R6 531 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 RHOXF2BP0C7M4 288 aa11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 AFMP43652 599 aa11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 PDE1AP54750 535 aa11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 NLRP5P59047 1200 aa11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 SPECC1LQ69YQ0 1117 aa11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 CEP57Q86XR8 500 aa11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 NUDT16Q96DE0 195 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 RHOXF2Q9BQY4 288 aa11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 SYNJ2O15056 1496 aa11.71□□□□□ -0.53
GTF3C1-202ENST00000561623 CCDC196A0A1B0GTZ2 297 aa11.71□□□□□ -0.54
GTF3C1-202ENST00000561623 GIGYF2Q6Y7W6 1299 aaKnown RBP11.71□□□□□ -0.54
GTF3C1-202ENST00000561623 WAPLQ7Z5K2 1190 aa11.71□□□□□ -0.54
GTF3C1-202ENST00000561623 PTPN23Q9H3S7 1636 aa11.71□□□□□ -0.54
GTF3C1-202ENST00000561623 VGLL3A8MV65 326 aa11.71□□□□□ -0.54
GTF3C1-202ENST00000561623 KCNA4P22459 653 aa11.71□□□□□ -0.54
GTF3C1-202ENST00000561623 LMTK3Q96Q04 1460 aa11.71□□□□□ -0.54
GTF3C1-202ENST00000561623 RIOK3O14730 519 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms