RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 TMEM92Q6UXU6 159 aa9.85□□□□□ -0.83
ZEB1-223ENST00000561304 THUMPD2Q9BTF0 503 aaKnown RBP9.85□□□□□ -0.83
ZEB1-223ENST00000561304 MIS18AQ9NYP9 233 aa9.85□□□□□ -0.83
ZEB1-223ENST00000561304 BCS1LQ9Y276 419 aa9.85□□□□□ -0.83
ZEB1-223ENST00000561304 USP16Q9Y5T5 823 aa9.85□□□□□ -0.83
ZEB1-223ENST00000561304 SLX4Q8IY92 1834 aa9.85□□□□□ -0.83
ZEB1-223ENST00000561304 ANKRD36CQ5JPF3 1778 aa9.84□□□□□ -0.83
ZEB1-223ENST00000561304 STARD3NLO95772 234 aa9.84□□□□□ -0.83
ZEB1-223ENST00000561304 TBC1D9BQ66K14 1250 aa9.84□□□□□ -0.83
ZEB1-223ENST00000561304 RTF1Q92541 710 aaKnown RBP9.84□□□□□ -0.83
ZEB1-223ENST00000561304 TBC1D2BQ9UPU7 963 aa9.84□□□□□ -0.83
ZEB1-223ENST00000561304 ZNF330Q9Y3S2 320 aaPredicted RBP9.84□□□□□ -0.83
ZEB1-223ENST00000561304 HTATSF1O43719 755 aaKnown RBP9.83□□□□□ -0.84
ZEB1-223ENST00000561304 IL6STP40189 918 aaPredicted RBP9.83□□□□□ -0.84
ZEB1-223ENST00000561304 RALBP1Q15311 655 aa9.83□□□□□ -0.84
ZEB1-223ENST00000561304 NFE2L2Q16236 605 aa9.83□□□□□ -0.84
ZEB1-223ENST00000561304 BICDL1Q6ZP65 573 aa9.83□□□□□ -0.84
ZEB1-223ENST00000561304 MYBBP1AQ9BQG0 1328 aaKnown RBP9.82□□□□□ -0.84
ZEB1-223ENST00000561304 NBPF26B4DH59 902 aa9.82□□□□□ -0.84
ZEB1-223ENST00000561304 KIF3CO14782 793 aa9.82□□□□□ -0.84
ZEB1-223ENST00000561304 CAMTA2O94983 1202 aa9.82□□□□□ -0.84
ZEB1-223ENST00000561304 SERPINB2P05120 415 aa9.82□□□□□ -0.84
ZEB1-223ENST00000561304 NBPF10Q6P3W6 841 aaKnown RBP9.82□□□□□ -0.84
ZEB1-223ENST00000561304 NBPF15Q8N660 670 aa9.82□□□□□ -0.84
ZEB1-223ENST00000561304 ZNF526Q8TF50 670 aaPredicted RBP9.82□□□□□ -0.84
ZEB1-223ENST00000561304 TEX13AQ9BXU3 409 aaPredicted RBP9.82□□□□□ -0.84
ZEB1-223ENST00000561304 LAMB2P55268 1798 aa9.82□□□□□ -0.84
ZEB1-223ENST00000561304 A0A087WZG4 1122 aa9.81□□□□□ -0.84
ZEB1-223ENST00000561304 TAF7Q15545 349 aaPredicted RBP9.81□□□□□ -0.84
ZEB1-223ENST00000561304 CCDC24Q8N4L8 307 aa9.81□□□□□ -0.84
ZEB1-223ENST00000561304 GIGYF1O75420 1035 aaPredicted RBP9.8□□□□□ -0.84
ZEB1-223ENST00000561304 SNRPA1P09661 255 aaKnown RBP9.8□□□□□ -0.84
ZEB1-223ENST00000561304 C1QTNF8P60827 252 aa9.8□□□□□ -0.84
ZEB1-223ENST00000561304 ARHGAP27Q6ZUM4 889 aa9.8□□□□□ -0.84
ZEB1-223ENST00000561304 TMC2Q8TDI7 906 aa9.8□□□□□ -0.84
ZEB1-223ENST00000561304 PIM2Q9P1W9 311 aa9.8□□□□□ -0.84
ZEB1-223ENST00000561304 MAPK8IP3Q9UPT6 1336 aa9.8□□□□□ -0.84
ZEB1-223ENST00000561304 DALRD3Q5D0E6 543 aaKnown RBP9.79□□□□□ -0.84
ZEB1-223ENST00000561304 PRR5LQ6MZQ0 368 aa9.79□□□□□ -0.84
ZEB1-223ENST00000561304 DZIP3Q86Y13 1208 aaKnown RBP9.79□□□□□ -0.84
ZEB1-223ENST00000561304 CCDC146Q8IYE0 955 aa9.79□□□□□ -0.84
ZEB1-223ENST00000561304 SPRYD3Q8NCJ5 442 aa9.79□□□□□ -0.84
ZEB1-223ENST00000561304 C2orf72A6NCS6 295 aa9.78□□□□□ -0.84
ZEB1-223ENST00000561304 NEFMP07197 916 aa9.78□□□□□ -0.84
ZEB1-223ENST00000561304 PRELPP51888 382 aa9.78□□□□□ -0.84
ZEB1-223ENST00000561304 EIF4A1P60842 406 aaKnown RBP9.78□□□□□ -0.84
ZEB1-223ENST00000561304 RASSF7Q02833 373 aa9.78□□□□□ -0.84
ZEB1-223ENST00000561304 DOK7Q18PE1 504 aa9.78□□□□□ -0.84
ZEB1-223ENST00000561304 RRP7AQ9Y3A4 280 aaKnown RBP9.78□□□□□ -0.84
ZEB1-223ENST00000561304 TMPOP42166 694 aaKnown RBP9.77□□□□□ -0.84
ZEB1-223ENST00000561304 RIPK4P57078 832 aa9.77□□□□□ -0.84
ZEB1-223ENST00000561304 C2CD5Q86YS7 1000 aa9.77□□□□□ -0.84
ZEB1-223ENST00000561304 PRKRIP1Q9H875 184 aaPredicted RBP9.77□□□□□ -0.84
ZEB1-223ENST00000561304 GPBP1L1Q9HC44 474 aaPredicted RBP9.77□□□□□ -0.84
ZEB1-223ENST00000561304 TAF1P21675 1872 aa9.77□□□□□ -0.85
ZEB1-223ENST00000561304 HOXB3P14651 431 aaPredicted RBP9.76□□□□□ -0.85
ZEB1-223ENST00000561304 HLFQ16534 295 aa9.76□□□□□ -0.85
ZEB1-223ENST00000561304 C9orf131Q5VYM1 1079 aa9.76□□□□□ -0.85
ZEB1-223ENST00000561304 GPHNQ9NQX3 736 aaPredicted RBP9.76□□□□□ -0.85
ZEB1-223ENST00000561304 SENP3-EIF4A1A0A087X0R7 540 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 TTLL7Q6ZT98 887 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 CNBD1Q8NA66 436 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 PNISRQ8TF01 805 aaKnown RBP9.75□□□□□ -0.85
ZEB1-223ENST00000561304 SETDB2Q96T68 719 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 PNNQ9H307 717 aaKnown RBP9.75□□□□□ -0.85
ZEB1-223ENST00000561304 DDX60Q8IY21 1712 aaKnown RBP9.75□□□□□ -0.85
ZEB1-223ENST00000561304 WDR90Q96KV7 1748 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 ABCC12Q96J65 1359 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 H0YIN7 160 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 RIMBP2O15034 1052 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 NEUROD2Q15784 382 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 KRT24Q2M2I5 525 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 PROSER3Q2NL68 480 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 LRP10Q7Z4F1 713 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 NGEFQ8N5V2 710 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 TTLL6Q8N841 843 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 BRIP1Q9BX63 1249 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 NMRK2Q9NPI5 230 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 RNF181Q9P0P0 153 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 TSPYL4Q9UJ04 414 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 ADAMTS8Q9UP79 889 aa9.75□□□□□ -0.85
ZEB1-223ENST00000561304 FAM177BA6PVY3 158 aa9.74□□□□□ -0.85
ZEB1-223ENST00000561304 NFKBIEO00221 500 aa9.74□□□□□ -0.85
ZEB1-223ENST00000561304 ANXA1P04083 346 aa9.74□□□□□ -0.85
ZEB1-223ENST00000561304 MYL6BP14649 208 aa9.74□□□□□ -0.85
ZEB1-223ENST00000561304 PDE6BP35913 854 aa9.74□□□□□ -0.85
ZEB1-223ENST00000561304 CLEC4GQ6UXB4 293 aa9.74□□□□□ -0.85
ZEB1-223ENST00000561304 NPM2Q86SE8 214 aaKnown RBP9.74□□□□□ -0.85
ZEB1-223ENST00000561304 ZNF622Q969S3 477 aaKnown RBP eCLIP9.74□□□□□ -0.85
ZEB1-223ENST00000561304 RUNDC1Q96C34 613 aa9.74□□□□□ -0.85
ZEB1-223ENST00000561304 ZSWIM6Q9HCJ5 1215 aa9.74□□□□□ -0.85
ZEB1-223ENST00000561304 NIP7Q9Y221 180 aaKnown RBP eCLIP9.74□□□□□ -0.85
ZEB1-223ENST00000561304 UBN2Q6ZU65 1347 aa9.73□□□□□ -0.85
ZEB1-223ENST00000561304 ST5P78524 1137 aa9.73□□□□□ -0.85
ZEB1-223ENST00000561304 FOXK1P85037 733 aa9.73□□□□□ -0.85
ZEB1-223ENST00000561304 WDR43Q15061 677 aaKnown RBP eCLIP9.73□□□□□ -0.85
ZEB1-223ENST00000561304 PDIA6Q15084 440 aa9.73□□□□□ -0.85
ZEB1-223ENST00000561304 CCDC184Q52MB2 194 aa9.73□□□□□ -0.85
ZEB1-223ENST00000561304 NBPF5PQ86XG9 351 aaPredicted RBP9.73□□□□□ -0.85
ZEB1-223ENST00000561304 ZNF710Q8N1W2 664 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms