RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 GIGYF2Q6Y7W6 1299 aaKnown RBP13.36□□□□□ -0.27
SNRPA1-212ENST00000560496 CCDC146Q8IYE0 955 aa13.36□□□□□ -0.27
SNRPA1-212ENST00000560496 ZNF34Q8IZ26 560 aa13.36□□□□□ -0.27
SNRPA1-212ENST00000560496 KLRG1Q96E93 195 aa13.36□□□□□ -0.27
SNRPA1-212ENST00000560496 NYXQ9GZU5 481 aa13.36□□□□□ -0.27
SNRPA1-212ENST00000560496 BABAM1Q9NWV8 329 aa13.36□□□□□ -0.27
SNRPA1-212ENST00000560496 ANXA1P04083 346 aa13.35□□□□□ -0.27
SNRPA1-212ENST00000560496 POTEIP0CG38 1075 aa13.35□□□□□ -0.27
SNRPA1-212ENST00000560496 POTEJP0CG39 1038 aa13.35□□□□□ -0.27
SNRPA1-212ENST00000560496 LMOD3Q0VAK6 560 aa13.35□□□□□ -0.27
SNRPA1-212ENST00000560496 SUSD4Q5VX71 490 aa13.35□□□□□ -0.27
SNRPA1-212ENST00000560496 JMYQ8N9B5 988 aa13.35□□□□□ -0.27
SNRPA1-212ENST00000560496 L3MBTL3Q96JM7 780 aaPredicted RBP13.35□□□□□ -0.27
SNRPA1-212ENST00000560496 ZNF277Q9NRM2 450 aaPredicted RBP13.35□□□□□ -0.27
SNRPA1-212ENST00000560496 KRT24Q2M2I5 525 aa13.34□□□□□ -0.27
SNRPA1-212ENST00000560496 DPY19L2Q6NUT2 758 aa13.34□□□□□ -0.27
SNRPA1-212ENST00000560496 C3orf67Q6ZVT6 689 aa13.34□□□□□ -0.27
SNRPA1-212ENST00000560496 TRIM35Q9UPQ4 493 aa13.34□□□□□ -0.27
SNRPA1-212ENST00000560496 THSD7BQ9C0I4 1608 aa13.32□□□□□ -0.28
SNRPA1-212ENST00000560496 EIF2S2P20042 333 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-212ENST00000560496 GTF2E1P29083 439 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-212ENST00000560496 ALDH1B1P30837 517 aa13.32□□□□□ -0.28
SNRPA1-212ENST00000560496 HOXA10P31260 410 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-212ENST00000560496 IARSP41252 1262 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-212ENST00000560496 RTKN2Q8IZC4 609 aa13.32□□□□□ -0.28
SNRPA1-212ENST00000560496 RUNDC1Q96C34 613 aa13.32□□□□□ -0.28
SNRPA1-212ENST00000560496 PSMD1Q99460 953 aa13.32□□□□□ -0.28
SNRPA1-212ENST00000560496 CHL1O00533 1208 aa13.31□□□□□ -0.28
SNRPA1-212ENST00000560496 NEUROD2Q15784 382 aa13.31□□□□□ -0.28
SNRPA1-212ENST00000560496 PARP10Q53GL7 1025 aa13.31□□□□□ -0.28
SNRPA1-212ENST00000560496 PRKRIP1Q9H875 184 aaPredicted RBP13.31□□□□□ -0.28
SNRPA1-212ENST00000560496 RNF123Q5XPI4 1314 aa13.31□□□□□ -0.28
SNRPA1-212ENST00000560496 FZD9O00144 591 aa13.3□□□□□ -0.28
SNRPA1-212ENST00000560496 WDR43Q15061 677 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNRPA1-212ENST00000560496 NECTIN2Q92692 538 aa13.3□□□□□ -0.28
SNRPA1-212ENST00000560496 RPGRQ92834 1020 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-212ENST00000560496 TAF1DQ9H5J8 278 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-212ENST00000560496 ADAMTS8Q9UP79 889 aa13.3□□□□□ -0.28
SNRPA1-212ENST00000560496 ABCC4O15439 1325 aa13.3□□□□□ -0.28
SNRPA1-212ENST00000560496 TRPM7Q96QT4 1865 aa13.29□□□□□ -0.28
SNRPA1-212ENST00000560496 PPEF1O14829 653 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-212ENST00000560496 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
SNRPA1-212ENST00000560496 PPP1R42Q7Z4L9 355 aa13.29□□□□□ -0.28
SNRPA1-212ENST00000560496 SYNE4Q8N205 404 aa13.29□□□□□ -0.28
SNRPA1-212ENST00000560496 XAGE3Q8WTP9 111 aa13.29□□□□□ -0.28
SNRPA1-212ENST00000560496 CRAMP1Q96RY5 1269 aa13.29□□□□□ -0.28
SNRPA1-212ENST00000560496 DDX21Q9NR30 783 aaKnown RBP eCLIP13.29□□□□□ -0.28
SNRPA1-212ENST00000560496 CHPF2Q9P2E5 772 aa13.29□□□□□ -0.28
SNRPA1-212ENST00000560496 PASKQ96RG2 1323 aa13.29□□□□□ -0.28
SNRPA1-212ENST00000560496 IQCA1LA6NCM1 817 aa13.28□□□□□ -0.28
SNRPA1-212ENST00000560496 HOXB7P09629 217 aa13.28□□□□□ -0.28
SNRPA1-212ENST00000560496 COPS6Q7L5N1 327 aa13.28□□□□□ -0.28
SNRPA1-212ENST00000560496 NLRP10Q86W26 655 aa13.28□□□□□ -0.28
SNRPA1-212ENST00000560496 LDHDQ86WU2 507 aa13.28□□□□□ -0.28
SNRPA1-212ENST00000560496 AIMP1Q12904 312 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-212ENST00000560496 SLC10A5Q5PT55 438 aa13.27□□□□□ -0.29
SNRPA1-212ENST00000560496 CC2D2BQ6DHV5 1058 aa13.27□□□□□ -0.29
SNRPA1-212ENST00000560496 RBM17Q96I25 401 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-212ENST00000560496 UTP14AQ9BVJ6 771 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-212ENST00000560496 PSME4Q14997 1843 aa13.27□□□□□ -0.29
SNRPA1-212ENST00000560496 SPEF2Q9C093 1822 aa13.27□□□□□ -0.29
SNRPA1-212ENST00000560496 MYH3P11055 1940 aa13.27□□□□□ -0.29
SNRPA1-212ENST00000560496 HSP90AB3PQ58FF7 597 aa13.26□□□□□ -0.29
SNRPA1-212ENST00000560496 HDGFL1Q5TGJ6 251 aa13.26□□□□□ -0.29
SNRPA1-212ENST00000560496 GPC2Q8N158 579 aa13.26□□□□□ -0.29
SNRPA1-212ENST00000560496 CREBZFQ9NS37 354 aa13.26□□□□□ -0.29
SNRPA1-212ENST00000560496 LAS1LQ9Y4W2 734 aaKnown RBP13.26□□□□□ -0.29
SNRPA1-212ENST00000560496 ZNF646O15015 1829 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-212ENST00000560496 CNTNAP1P78357 1384 aa13.25□□□□□ -0.29
SNRPA1-212ENST00000560496 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
SNRPA1-212ENST00000560496 EPHX2P34913 555 aa13.25□□□□□ -0.29
SNRPA1-212ENST00000560496 TCIRG1Q13488 830 aa13.25□□□□□ -0.29
SNRPA1-212ENST00000560496 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
SNRPA1-212ENST00000560496 NLRP3Q96P20 1036 aa13.25□□□□□ -0.29
SNRPA1-212ENST00000560496 MBIPQ9NS73 344 aa13.25□□□□□ -0.29
SNRPA1-212ENST00000560496 HACL1Q9UJ83 578 aa13.25□□□□□ -0.29
SNRPA1-212ENST00000560496 HCLS1P14317 486 aaPredicted RBP13.24□□□□□ -0.29
SNRPA1-212ENST00000560496 SCNN1DP51172 638 aa13.24□□□□□ -0.29
SNRPA1-212ENST00000560496 GRIPAP1Q4V328 841 aa13.24□□□□□ -0.29
SNRPA1-212ENST00000560496 ATP6V0A2Q9Y487 856 aa13.24□□□□□ -0.29
SNRPA1-212ENST00000560496 SH3TC1Q8TE82 1336 aa13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 TCERG1O14776 1098 aaKnown RBP13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 ITGBL1O95965 494 aaPredicted RBP13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 HSPA1AP0DMV8 641 aaKnown RBP13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 HSPA1BP0DMV9 641 aaKnown RBP13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 AOC3Q16853 763 aa13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 EAPPQ56P03 285 aaPredicted RBP13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 PLBD2Q8NHP8 589 aa13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 JDP2Q8WYK2 163 aa13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 RTFDC1Q9BY42 306 aaPredicted RBP13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 DBF4Q9UBU7 674 aaPredicted RBP13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 SCN9AQ15858 1988 aa13.23□□□□□ -0.29
SNRPA1-212ENST00000560496 PPIP5K2O43314 1243 aa13.22□□□□□ -0.29
SNRPA1-212ENST00000560496 GRAPQ13588 217 aa13.22□□□□□ -0.29
SNRPA1-212ENST00000560496 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
SNRPA1-212ENST00000560496 GRAPLQ8TC17 118 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-212ENST00000560496 ZNF428Q96B54 188 aa13.22□□□□□ -0.29
SNRPA1-212ENST00000560496 IFT57Q9NWB7 429 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms