RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 NPM2Q86SE8 214 aaKnown RBP9.09□□□□□ -0.95
HMBOX1-214ENST00000560357 SIRT2Q8IXJ6 389 aa9.09□□□□□ -0.95
HMBOX1-214ENST00000560357 ISCA1Q9BUE6 129 aa9.09□□□□□ -0.95
HMBOX1-214ENST00000560357 RWDD1Q9H446 243 aaPredicted RBP9.09□□□□□ -0.95
HMBOX1-214ENST00000560357 TBC1D2BQ9UPU7 963 aa9.09□□□□□ -0.95
HMBOX1-214ENST00000560357 TNS1Q9HBL0 1735 aaKnown RBP9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 NUP98P52948 1817 aa9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 AFDNP55196 1824 aaKnown RBP9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 GRM8O00222 908 aa9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 CAMTA2O94983 1202 aa9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 TRIM28Q13263 835 aaKnown RBP9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 TXNRD1Q16881 649 aa9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 CEP85Q6P2H3 762 aa9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 RPAP2Q8IXW5 612 aaPredicted RBP9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 ANKRD44Q8N8A2 993 aa9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 ARXQ96QS3 562 aa9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 C9orf78Q9NZ63 289 aaPredicted RBP9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 COL15A1P39059 1388 aa9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 C4BP0C0L5 1744 aa9.08□□□□□ -0.96
HMBOX1-214ENST00000560357 A0A087WZG4 1122 aa9.07□□□□□ -0.96
HMBOX1-214ENST00000560357 H7C1W4 665 aa9.07□□□□□ -0.96
HMBOX1-214ENST00000560357 GNPATO15228 680 aa9.07□□□□□ -0.96
HMBOX1-214ENST00000560357 HSP90AB3PQ58FF7 597 aa9.07□□□□□ -0.96
HMBOX1-214ENST00000560357 SMIM5Q71RC9 77 aa9.07□□□□□ -0.96
HMBOX1-214ENST00000560357 CCDC191Q8NCU4 936 aa9.07□□□□□ -0.96
HMBOX1-214ENST00000560357 CWC25Q9NXE8 425 aaPredicted RBP9.07□□□□□ -0.96
HMBOX1-214ENST00000560357 LRRFIP2Q9Y608 721 aaKnown RBP9.07□□□□□ -0.96
HMBOX1-214ENST00000560357 RGL2O15211 777 aa9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 HMGB2P26583 209 aaKnown RBP9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 CASP7P55210 303 aa9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 ATP8B2P98198 1209 aa9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 AMIGO3Q86WK7 504 aa9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 SMC5Q8IY18 1101 aa9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 ZNF34Q8IZ26 560 aa9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 KAZALD1Q96I82 304 aa9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 SUCLG2Q96I99 432 aa9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 DCBLD2Q96PD2 775 aa9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 HDAC5Q9UQL6 1122 aa9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 RTCBQ9Y3I0 505 aaKnown RBP9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 ANKRD36CQ5JPF3 1778 aa9.06□□□□□ -0.96
HMBOX1-214ENST00000560357 UBR3Q6ZT12 1888 aa9.05□□□□□ -0.96
HMBOX1-214ENST00000560357 RGPD3A6NKT7 1758 aaPredicted RBP9.05□□□□□ -0.96
HMBOX1-214ENST00000560357 BCORQ6W2J9 1755 aa9.05□□□□□ -0.96
HMBOX1-214ENST00000560357 RGPD4Q7Z3J3 1758 aa9.05□□□□□ -0.96
HMBOX1-214ENST00000560357 GALR2O43603 387 aaPredicted RBP9.05□□□□□ -0.96
HMBOX1-214ENST00000560357 LHX8Q68G74 356 aa9.05□□□□□ -0.96
HMBOX1-214ENST00000560357 CLEC4GQ6UXB4 293 aa9.05□□□□□ -0.96
HMBOX1-214ENST00000560357 NLRP10Q86W26 655 aa9.05□□□□□ -0.96
HMBOX1-214ENST00000560357 JARID2Q92833 1246 aaPredicted RBP9.05□□□□□ -0.96
HMBOX1-214ENST00000560357 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
HMBOX1-214ENST00000560357 AK7Q96M32 723 aa9.05□□□□□ -0.96
HMBOX1-214ENST00000560357 NARFQ9UHQ1 456 aa9.05□□□□□ -0.96
HMBOX1-214ENST00000560357 PNMA6EA0A0J9YXQ4 647 aa9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 PCCAP05165 728 aaPredicted RBP9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 GPTP24298 496 aa9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 MTX1Q13505 466 aa9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 TRAPPC3LQ5T215 181 aa9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 UBE3BQ7Z3V4 1068 aa9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 PPP1R42Q7Z4L9 355 aa9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 SSH3Q8TE77 659 aa9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 PHF12Q96QT6 1004 aa9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 CAMKK2Q96RR4 588 aa9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 BICC1Q9H694 974 aaKnown RBP9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 DCTPP1Q9H773 170 aa9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 BCL2L12Q9HB09 334 aa9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 UBN2Q6ZU65 1347 aa9.04□□□□□ -0.96
HMBOX1-214ENST00000560357 HMMRO75330 724 aa9.03□□□□□ -0.96
HMBOX1-214ENST00000560357 EPHA10Q5JZY3 1008 aa9.03□□□□□ -0.96
HMBOX1-214ENST00000560357 USPL1Q5W0Q7 1092 aa9.03□□□□□ -0.96
HMBOX1-214ENST00000560357 ZBTB38Q8NAP3 1195 aaPredicted RBP9.03□□□□□ -0.96
HMBOX1-214ENST00000560357 GCC1Q96CN9 775 aa9.03□□□□□ -0.96
HMBOX1-214ENST00000560357 SRP68Q9UHB9 627 aaKnown RBP9.03□□□□□ -0.96
HMBOX1-214ENST00000560357 PDZRN3Q9UPQ7 1066 aa9.03□□□□□ -0.96
HMBOX1-214ENST00000560357 ZNF652Q9Y2D9 606 aa9.03□□□□□ -0.96
HMBOX1-214ENST00000560357 SCN7AQ01118 1682 aa9.03□□□□□ -0.96
HMBOX1-214ENST00000560357 C4AP0C0L4 1744 aa9.02□□□□□ -0.96
HMBOX1-214ENST00000560357 EP400Q96L91 3159 aa9.02□□□□□ -0.96
HMBOX1-214ENST00000560357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 SRGAP3O43295 1099 aa9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 ZPR1O75312 459 aa9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 PHF14O94880 888 aa9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 SSFA2P28290 1259 aa9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 RFC4P35249 363 aa9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 FOXO4P98177 505 aa9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 EN1Q05925 392 aaPredicted RBP9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 EZH2Q15910 746 aaKnown RBP9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 ZNF827Q17R98 1081 aa9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 RABL6Q3YEC7 729 aaPredicted RBP9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 PARP10Q53GL7 1025 aa9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 RTL5Q5HYW3 569 aaPredicted RBP9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 SUSD4Q5VX71 490 aa9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 FAM89AQ96GI7 184 aa9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 TRMT112Q9UI30 125 aaKnown RBP9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 NIP7Q9Y221 180 aaKnown RBP eCLIP9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 USP42Q9H9J4 1324 aaKnown RBP9.02□□□□□ -0.97
HMBOX1-214ENST00000560357 NUCB1Q02818 461 aa9.01□□□□□ -0.97
HMBOX1-214ENST00000560357 TBC1D9BQ66K14 1250 aa9.01□□□□□ -0.97
HMBOX1-214ENST00000560357 SKAP1Q86WV1 359 aa9.01□□□□□ -0.97
HMBOX1-214ENST00000560357 SYNE4Q8N205 404 aa9.01□□□□□ -0.97
HMBOX1-214ENST00000560357 UTP14AQ9BVJ6 771 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 510.5 ms