RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 NLGN1Q8N2Q7 840 aa20.83■□□□□ 0.93
TPM1-219ENST00000559397 SLC16A10Q8TF71 515 aa20.83■□□□□ 0.93
TPM1-219ENST00000559397 NIP7Q9Y221 180 aaKnown RBP eCLIP20.83■□□□□ 0.93
TPM1-219ENST00000559397 TM4SF1P30408 202 aa20.83■□□□□ 0.92
TPM1-219ENST00000559397 NFIXQ14938 502 aa20.83■□□□□ 0.92
TPM1-219ENST00000559397 NLRP10Q86W26 655 aa20.83■□□□□ 0.92
TPM1-219ENST00000559397 ITPRIPQ8IWB1 547 aa20.83■□□□□ 0.92
TPM1-219ENST00000559397 COL24A1Q17RW2 1714 aa20.82■□□□□ 0.92
TPM1-219ENST00000559397 IBTKQ9P2D0 1353 aaPredicted RBP20.82■□□□□ 0.92
TPM1-219ENST00000559397 ALDH1L1O75891 902 aa20.82■□□□□ 0.92
TPM1-219ENST00000559397 CCDC191Q8NCU4 936 aa20.82■□□□□ 0.92
TPM1-219ENST00000559397 PCDHB15Q9Y5E8 787 aa20.82■□□□□ 0.92
TPM1-219ENST00000559397 BICDL1Q6ZP65 573 aa20.81■□□□□ 0.92
TPM1-219ENST00000559397 GCKRQ14397 625 aa20.8■□□□□ 0.92
TPM1-219ENST00000559397 PARP10Q53GL7 1025 aa20.8■□□□□ 0.92
TPM1-219ENST00000559397 MSL1Q68DK7 614 aa20.8■□□□□ 0.92
TPM1-219ENST00000559397 SETDB2Q96T68 719 aa20.8■□□□□ 0.92
TPM1-219ENST00000559397 ZBTB40Q9NUA8 1239 aa20.8■□□□□ 0.92
TPM1-219ENST00000559397 CWC25Q9NXE8 425 aaPredicted RBP20.8■□□□□ 0.92
TPM1-219ENST00000559397 SUSD4Q5VX71 490 aa20.8■□□□□ 0.92
TPM1-219ENST00000559397 ZBTB7BO15156 539 aaPredicted RBP20.78■□□□□ 0.92
TPM1-219ENST00000559397 IGHDP01880 384 aa20.78■□□□□ 0.92
TPM1-219ENST00000559397 DDR1Q08345 913 aa20.78■□□□□ 0.92
TPM1-219ENST00000559397 CARMIL3Q8ND23 1372 aa20.78■□□□□ 0.92
TPM1-219ENST00000559397 POLRMTO00411 1230 aaKnown RBP20.77■□□□□ 0.92
TPM1-219ENST00000559397 CHMP4BQ9H444 224 aaKnown RBP20.77■□□□□ 0.92
TPM1-219ENST00000559397 ZBTB7AO95365 584 aa20.77■□□□□ 0.91
TPM1-219ENST00000559397 NTSR2O95665 410 aa20.77■□□□□ 0.91
TPM1-219ENST00000559397 MTFR1LQ9H019 292 aa20.77■□□□□ 0.91
TPM1-219ENST00000559397 USP44Q9H0E7 712 aa20.77■□□□□ 0.91
TPM1-219ENST00000559397 UTYO14607 1347 aa20.76■□□□□ 0.91
TPM1-219ENST00000559397 MMP10P09238 476 aa20.76■□□□□ 0.91
TPM1-219ENST00000559397 PPP1R42Q7Z4L9 355 aa20.76■□□□□ 0.91
TPM1-219ENST00000559397 UTP14AQ9BVJ6 771 aaKnown RBP20.76■□□□□ 0.91
TPM1-219ENST00000559397 H7C1W4 665 aa20.75■□□□□ 0.91
TPM1-219ENST00000559397 GRM8O00222 908 aa20.75■□□□□ 0.91
TPM1-219ENST00000559397 CASP7P55210 303 aa20.75■□□□□ 0.91
TPM1-219ENST00000559397 ZBTB38Q8NAP3 1195 aaPredicted RBP20.75■□□□□ 0.91
TPM1-219ENST00000559397 TSHZ2Q9NRE2 1034 aa20.75■□□□□ 0.91
TPM1-219ENST00000559397 NRXN2Q9P2S2 1712 aa20.75■□□□□ 0.91
TPM1-219ENST00000559397 FAM177BA6PVY3 158 aa20.74■□□□□ 0.91
TPM1-219ENST00000559397 SERPINB2P05120 415 aa20.74■□□□□ 0.91
TPM1-219ENST00000559397 PCCAP05165 728 aaPredicted RBP20.74■□□□□ 0.91
TPM1-219ENST00000559397 MEIS3Q99687 375 aa20.74■□□□□ 0.91
TPM1-219ENST00000559397 C9orf78Q9NZ63 289 aaPredicted RBP20.74■□□□□ 0.91
TPM1-219ENST00000559397 TRMT112Q9UI30 125 aaKnown RBP20.74■□□□□ 0.91
TPM1-219ENST00000559397 NBPF7P0C2Y1 421 aaPredicted RBP20.73■□□□□ 0.91
TPM1-219ENST00000559397 NBPF5PQ86XG9 351 aaPredicted RBP20.73■□□□□ 0.91
TPM1-219ENST00000559397 JARID2Q92833 1246 aaPredicted RBP20.73■□□□□ 0.91
TPM1-219ENST00000559397 FAM89AQ96GI7 184 aa20.73■□□□□ 0.91
TPM1-219ENST00000559397 NYXQ9GZU5 481 aa20.73■□□□□ 0.91
TPM1-219ENST00000559397 SYNE4Q8N205 404 aa20.73■□□□□ 0.91
TPM1-219ENST00000559397 ATF5Q9Y2D1 282 aaPredicted RBP20.73■□□□□ 0.91
TPM1-219ENST00000559397 PARP3Q9Y6F1 533 aa20.73■□□□□ 0.91
TPM1-219ENST00000559397 SH3TC1Q8TE82 1336 aa20.72■□□□□ 0.91
TPM1-219ENST00000559397 HDAC1Q13547 482 aaPredicted RBP20.72■□□□□ 0.91
TPM1-219ENST00000559397 RTL5Q5HYW3 569 aaPredicted RBP20.72■□□□□ 0.91
TPM1-219ENST00000559397 TPTE2Q6XPS3 522 aa20.72■□□□□ 0.91
TPM1-219ENST00000559397 NUTM1Q86Y26 1132 aa20.72■□□□□ 0.91
TPM1-219ENST00000559397 RWDD1Q9H446 243 aaPredicted RBP20.72■□□□□ 0.91
TPM1-219ENST00000559397 PRR5LQ6MZQ0 368 aa20.71■□□□□ 0.91
TPM1-219ENST00000559397 UBE3BQ7Z3V4 1068 aa20.71■□□□□ 0.91
TPM1-219ENST00000559397 CDHR2Q9BYE9 1310 aa20.71■□□□□ 0.91
TPM1-219ENST00000559397 ERFEQ4G0M1 354 aa20.7■□□□□ 0.91
TPM1-219ENST00000559397 SGIP1Q9BQI5 828 aa20.7■□□□□ 0.91
TPM1-219ENST00000559397 DDX60Q8IY21 1712 aaKnown RBP20.7■□□□□ 0.9
TPM1-219ENST00000559397 GNAI3P08754 354 aa20.7■□□□□ 0.9
TPM1-219ENST00000559397 SLC10A5Q5PT55 438 aa20.7■□□□□ 0.9
TPM1-219ENST00000559397 CNBD1Q8NA66 436 aa20.7■□□□□ 0.9
TPM1-219ENST00000559397 ABCC12Q96J65 1359 aa20.7■□□□□ 0.9
TPM1-219ENST00000559397 UBTFL1P0CB47 393 aaPredicted RBP20.69■□□□□ 0.9
TPM1-219ENST00000559397 PTGER2P43116 358 aa20.69■□□□□ 0.9
TPM1-219ENST00000559397 KAZALD1Q96I82 304 aa20.69■□□□□ 0.9
TPM1-219ENST00000559397 LAMB2P55268 1798 aa20.68■□□□□ 0.9
TPM1-219ENST00000559397 IRS4O14654 1257 aaPredicted RBP20.68■□□□□ 0.9
TPM1-219ENST00000559397 CCDC24Q8N4L8 307 aa20.68■□□□□ 0.9
TPM1-219ENST00000559397 SUCLG2Q96I99 432 aa20.68■□□□□ 0.9
TPM1-219ENST00000559397 GTF2E1P29083 439 aaPredicted RBP20.67■□□□□ 0.9
TPM1-219ENST00000559397 PLA2G12BQ9BX93 195 aa20.67■□□□□ 0.9
TPM1-219ENST00000559397 POLD1P28340 1107 aa20.67■□□□□ 0.9
TPM1-219ENST00000559397 GNAI2P04899 355 aa20.66■□□□□ 0.9
TPM1-219ENST00000559397 HCLS1P14317 486 aaPredicted RBP20.66■□□□□ 0.9
TPM1-219ENST00000559397 EPHA10Q5JZY3 1008 aa20.66■□□□□ 0.9
TPM1-219ENST00000559397 RIC1Q4ADV7 1423 aa20.66■□□□□ 0.9
TPM1-219ENST00000559397 ANKRD31Q8N7Z5 1873 aa20.65■□□□□ 0.9
TPM1-219ENST00000559397 ST5P78524 1137 aa20.65■□□□□ 0.9
TPM1-219ENST00000559397 FOXO4P98177 505 aa20.65■□□□□ 0.9
TPM1-219ENST00000559397 C1orf115Q9H7X2 142 aa20.65■□□□□ 0.9
TPM1-219ENST00000559397 LRRFIP2Q9Y608 721 aaKnown RBP20.65■□□□□ 0.9
TPM1-219ENST00000559397 MYH3P11055 1940 aa20.65■□□□□ 0.9
TPM1-219ENST00000559397 TNRC6CQ9HCJ0 1690 aaKnown RBP20.64■□□□□ 0.9
TPM1-219ENST00000559397 NPHP1O15259 732 aa20.64■□□□□ 0.9
TPM1-219ENST00000559397 PDE8AO60658 829 aa20.64■□□□□ 0.9
TPM1-219ENST00000559397 SPON1Q9HCB6 807 aa20.64■□□□□ 0.9
TPM1-219ENST00000559397 SKAP1Q86WV1 359 aa20.64■□□□□ 0.89
TPM1-219ENST00000559397 BICC1Q9H694 974 aaKnown RBP20.64■□□□□ 0.89
TPM1-219ENST00000559397 HDAC5Q9UQL6 1122 aa20.64■□□□□ 0.89
TPM1-219ENST00000559397 HSP90B1P14625 803 aaKnown RBP20.63■□□□□ 0.89
TPM1-219ENST00000559397 C3orf67Q6ZVT6 689 aa20.63■□□□□ 0.89
TPM1-219ENST00000559397 SMC5Q8IY18 1101 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms