RNA–Protein interactions for RNA: ENST00000558863.5

ZEB1-214, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,355 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-214ENST00000558863 FAM177BA6PVY3 158 aa30.93■■■□□ 2.54
ZEB1-214ENST00000558863 IGKV5-2P06315 115 aa30.93■■■□□ 2.54
ZEB1-214ENST00000558863 TRMT112Q9UI30 125 aaKnown RBP30.93■■■□□ 2.54
ZEB1-214ENST00000558863 NEURL1BA8MQ27 555 aa30.92■■■□□ 2.54
ZEB1-214ENST00000558863 FHDC1Q9C0D6 1143 aaPredicted RBP30.92■■■□□ 2.54
ZEB1-214ENST00000558863 PDZRN3Q9UPQ7 1066 aa30.92■■■□□ 2.54
ZEB1-214ENST00000558863 BEND3Q5T5X7 828 aa30.92■■■□□ 2.54
ZEB1-214ENST00000558863 SLC4A10Q6U841 1118 aa30.92■■■□□ 2.54
ZEB1-214ENST00000558863 FRAT1Q92837 279 aaPredicted RBP30.92■■■□□ 2.54
ZEB1-214ENST00000558863 BRIP1Q9BX63 1249 aa30.92■■■□□ 2.54
ZEB1-214ENST00000558863 SH3TC1Q8TE82 1336 aa30.91■■■□□ 2.54
ZEB1-214ENST00000558863 ALDH1L1O75891 902 aa30.91■■■□□ 2.54
ZEB1-214ENST00000558863 HSP90B1P14625 803 aaKnown RBP30.91■■■□□ 2.54
ZEB1-214ENST00000558863 TGFB2P61812 414 aa30.91■■■□□ 2.54
ZEB1-214ENST00000558863 ZKSCAN2Q63HK3 967 aa30.91■■■□□ 2.54
ZEB1-214ENST00000558863 ATF7IPQ6VMQ6 1270 aa30.91■■■□□ 2.54
ZEB1-214ENST00000558863 KLHL34Q8N239 644 aa30.91■■■□□ 2.54
ZEB1-214ENST00000558863 SRCIN1Q9C0H9 1055 aa30.91■■■□□ 2.54
ZEB1-214ENST00000558863 RIC1Q4ADV7 1423 aa30.91■■■□□ 2.54
ZEB1-214ENST00000558863 PDE6BP35913 854 aa30.9■■■□□ 2.54
ZEB1-214ENST00000558863 ZBTB38Q8NAP3 1195 aaPredicted RBP30.9■■■□□ 2.54
ZEB1-214ENST00000558863 CWF19L2Q2TBE0 894 aaKnown RBP30.89■■■□□ 2.54
ZEB1-214ENST00000558863 PCCAP05165 728 aaPredicted RBP30.88■■■□□ 2.53
ZEB1-214ENST00000558863 CCT4P50991 539 aaKnown RBP30.88■■■□□ 2.53
ZEB1-214ENST00000558863 GCKRQ14397 625 aa30.88■■■□□ 2.53
ZEB1-214ENST00000558863 ERFEQ4G0M1 354 aa30.88■■■□□ 2.53
ZEB1-214ENST00000558863 NUTM1Q86Y26 1132 aa30.88■■■□□ 2.53
ZEB1-214ENST00000558863 SLC10A5Q5PT55 438 aa30.87■■■□□ 2.53
ZEB1-214ENST00000558863 SYT17Q9BSW7 474 aa30.87■■■□□ 2.53
ZEB1-214ENST00000558863 TRIM27P14373 513 aa30.86■■■□□ 2.53
ZEB1-214ENST00000558863 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.85■■■□□ 2.53
ZEB1-214ENST00000558863 ABCC4O15439 1325 aa30.85■■■□□ 2.53
ZEB1-214ENST00000558863 ABCC12Q96J65 1359 aa30.84■■■□□ 2.53
ZEB1-214ENST00000558863 MS4A1P11836 297 aa30.84■■■□□ 2.53
ZEB1-214ENST00000558863 FAM89AQ96GI7 184 aa30.84■■■□□ 2.53
ZEB1-214ENST00000558863 N4BP2Q86UW6 1770 aaPredicted RBP30.84■■■□□ 2.53
ZEB1-214ENST00000558863 CDHR2Q9BYE9 1310 aa30.83■■■□□ 2.53
ZEB1-214ENST00000558863 ANKRD31Q8N7Z5 1873 aa30.83■■■□□ 2.53
ZEB1-214ENST00000558863 KLRG2A4D1S0 409 aaPredicted RBP30.82■■■□□ 2.52
ZEB1-214ENST00000558863 CCDC24Q8N4L8 307 aa30.82■■■□□ 2.52
ZEB1-214ENST00000558863 NLRP3Q96P20 1036 aa30.82■■■□□ 2.52
ZEB1-214ENST00000558863 H0YIN7 160 aa30.81■■■□□ 2.52
ZEB1-214ENST00000558863 H7C1W4 665 aa30.8■■■□□ 2.52
ZEB1-214ENST00000558863 IRS4O14654 1257 aaPredicted RBP30.8■■■□□ 2.52
ZEB1-214ENST00000558863 INTS3Q68E01 1043 aaKnown RBP30.8■■■□□ 2.52
ZEB1-214ENST00000558863 FTSJ3Q8IY81 847 aaKnown RBP30.8■■■□□ 2.52
ZEB1-214ENST00000558863 C9orf78Q9NZ63 289 aaPredicted RBP30.8■■■□□ 2.52
ZEB1-214ENST00000558863 GRM8O00222 908 aa30.79■■■□□ 2.52
ZEB1-214ENST00000558863 LAMB2P55268 1798 aa30.79■■■□□ 2.52
ZEB1-214ENST00000558863 UBE3BQ7Z3V4 1068 aa30.79■■■□□ 2.52
ZEB1-214ENST00000558863 C2CD5Q86YS7 1000 aa30.79■■■□□ 2.52
ZEB1-214ENST00000558863 DZIP1LQ8IYY4 767 aaKnown RBP30.79■■■□□ 2.52
ZEB1-214ENST00000558863 CRY2Q49AN0 593 aa30.78■■■□□ 2.52
ZEB1-214ENST00000558863 RTL5Q5HYW3 569 aaPredicted RBP30.78■■■□□ 2.52
ZEB1-214ENST00000558863 SYNE4Q8N205 404 aa30.78■■■□□ 2.52
ZEB1-214ENST00000558863 NLGN2Q8NFZ4 835 aa30.78■■■□□ 2.52
ZEB1-214ENST00000558863 KIAA1551Q9HCM1 1747 aa30.77■■■□□ 2.52
ZEB1-214ENST00000558863 SRCAPQ6ZRS2 3230 aa30.77■■■□□ 2.52
ZEB1-214ENST00000558863 PDE8AO60658 829 aa30.77■■■□□ 2.52
ZEB1-214ENST00000558863 HCLS1P14317 486 aaPredicted RBP30.77■■■□□ 2.52
ZEB1-214ENST00000558863 DPEP1P16444 411 aa30.76■■■□□ 2.51
ZEB1-214ENST00000558863 CLUAP1Q96AJ1 413 aa30.76■■■□□ 2.51
ZEB1-214ENST00000558863 UTYO14607 1347 aa30.76■■■□□ 2.51
ZEB1-214ENST00000558863 DDX60Q8IY21 1712 aaKnown RBP30.75■■■□□ 2.51
ZEB1-214ENST00000558863 A0A0G2JLW4 131 aa30.75■■■□□ 2.51
ZEB1-214ENST00000558863 SRGNP10124 158 aa30.75■■■□□ 2.51
ZEB1-214ENST00000558863 NPR1P16066 1061 aa30.75■■■□□ 2.51
ZEB1-214ENST00000558863 STYK1Q6J9G0 422 aa30.75■■■□□ 2.51
ZEB1-214ENST00000558863 MASTLQ96GX5 879 aa30.75■■■□□ 2.51
ZEB1-214ENST00000558863 TNRC6CQ9HCJ0 1690 aaKnown RBP30.75■■■□□ 2.51
ZEB1-214ENST00000558863 DLEC1Q9Y238 1755 aa30.75■■■□□ 2.51
ZEB1-214ENST00000558863 CHRNA5P30532 468 aa30.74■■■□□ 2.51
ZEB1-214ENST00000558863 CASP7P55210 303 aa30.74■■■□□ 2.51
ZEB1-214ENST00000558863 PLA2G12BQ9BX93 195 aa30.74■■■□□ 2.51
ZEB1-214ENST00000558863 PIM2Q9P1W9 311 aa30.74■■■□□ 2.51
ZEB1-214ENST00000558863 HDAC5Q9UQL6 1122 aa30.74■■■□□ 2.51
ZEB1-214ENST00000558863 RPGRQ92834 1020 aaKnown RBP30.73■■■□□ 2.51
ZEB1-214ENST00000558863 SF3B3Q15393 1217 aaKnown RBP30.72■■■□□ 2.51
ZEB1-214ENST00000558863 COL11A2P13942 1736 aaPredicted RBP30.71■■■□□ 2.51
ZEB1-214ENST00000558863 KCNA3P22001 575 aa30.71■■■□□ 2.51
ZEB1-214ENST00000558863 JARID2Q92833 1246 aaPredicted RBP30.71■■■□□ 2.51
ZEB1-214ENST00000558863 CNKSR1Q969H4 720 aa30.71■■■□□ 2.51
ZEB1-214ENST00000558863 USP44Q9H0E7 712 aa30.71■■■□□ 2.51
ZEB1-214ENST00000558863 TNNQ9UQP3 1299 aa30.71■■■□□ 2.51
ZEB1-214ENST00000558863 HOXA10P31260 410 aaPredicted RBP30.7■■■□□ 2.51
ZEB1-214ENST00000558863 PDE3AQ14432 1141 aa30.7■■■□□ 2.51
ZEB1-214ENST00000558863 TMEM57Q8N5G2 664 aa30.7■■■□□ 2.51
ZEB1-214ENST00000558863 ZNF622Q969S3 477 aaKnown RBP eCLIP30.7■■■□□ 2.51
ZEB1-214ENST00000558863 RBM17Q96I25 401 aaKnown RBP30.7■■■□□ 2.51
ZEB1-214ENST00000558863 ALDH1B1P30837 517 aa30.69■■■□□ 2.5
ZEB1-214ENST00000558863 CTSWP56202 376 aa30.69■■■□□ 2.5
ZEB1-214ENST00000558863 CCDC152Q4G0S7 254 aa30.69■■■□□ 2.5
ZEB1-214ENST00000558863 TTLL6Q8N841 843 aa30.68■■■□□ 2.5
ZEB1-214ENST00000558863 BRCA1P38398 1863 aaKnown RBP30.68■■■□□ 2.5
ZEB1-214ENST00000558863 PLIN1O60240 522 aa30.67■■■□□ 2.5
ZEB1-214ENST00000558863 GNAI3P08754 354 aa30.67■■■□□ 2.5
ZEB1-214ENST00000558863 NBPF7P0C2Y1 421 aaPredicted RBP30.67■■■□□ 2.5
ZEB1-214ENST00000558863 C3orf67Q6ZVT6 689 aa30.67■■■□□ 2.5
ZEB1-214ENST00000558863 CRAMP1Q96RY5 1269 aa30.67■■■□□ 2.5
ZEB1-214ENST00000558863 MYH3P11055 1940 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms