RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ALG1LQ6GMV1 187 aa3□□□□□ -1.93
HIF1A-212ENST00000557538 GSX2Q9BZM3 304 aa3□□□□□ -1.93
HIF1A-212ENST00000557538 ZNF232Q9UNY5 417 aa3□□□□□ -1.93
HIF1A-212ENST00000557538 CCDC155Q8N6L0 562 aa3□□□□□ -1.93
HIF1A-212ENST00000557538 ATXN7L1Q9ULK2 861 aaPredicted RBP3□□□□□ -1.93
HIF1A-212ENST00000557538 KIF4AO95239 1232 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 ABL1P00519 1130 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 MAPK1P28482 360 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 PTSQ03393 145 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 ILDR2Q71H61 639 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 CSRNP1Q96S65 589 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 ZNF16P17020 682 aaPredicted RBP2.99□□□□□ -1.93
HIF1A-212ENST00000557538 IDH3AP50213 366 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 DAB2P98082 770 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 KIAA0319Q5VV43 1072 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 GALNT12Q8IXK2 581 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 EDEM1Q92611 657 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 TTC9Q92623 222 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 MKNK1Q9BUB5 465 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 ZFYVE28Q9HCC9 887 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 KLK14Q9P0G3 267 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 POLIQ9UNA4 740 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 KCNH4Q9UQ05 1017 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 P4HBP07237 508 aaKnown RBP2.99□□□□□ -1.93
HIF1A-212ENST00000557538 PTPN12Q05209 780 aaKnown RBP2.99□□□□□ -1.93
HIF1A-212ENST00000557538 PRPF40BQ6NWY9 871 aaKnown RBP2.99□□□□□ -1.93
HIF1A-212ENST00000557538 TMC4Q7Z404 712 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 NLRP13Q86W25 1043 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 PGBD3Q8N328 593 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 ZNF280CQ8ND82 737 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 CCDC87Q9NVE4 849 aa2.99□□□□□ -1.93
HIF1A-212ENST00000557538 GPR182O15218 404 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 ATXN7O15265 892 aaPredicted RBP2.98□□□□□ -1.93
HIF1A-212ENST00000557538 ITGA6P23229 1130 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 DBN1Q16643 649 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 ZNF326Q5BKZ1 582 aaKnown RBP2.98□□□□□ -1.93
HIF1A-212ENST00000557538 ZCCHC2Q9C0B9 1178 aaKnown RBP2.98□□□□□ -1.93
HIF1A-212ENST00000557538 SRCIN1Q9C0H9 1055 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 GGNBP2Q9H3C7 697 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 ADARB2-AS1A8MUL3 147 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 EFHC2Q5JST6 749 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 PRICKLE2Q7Z3G6 844 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 CACTIN-AS1Q8N1I8 211 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 SNX29Q8TEQ0 813 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 CHMP7Q8WUX9 453 aaPredicted RBP2.98□□□□□ -1.93
HIF1A-212ENST00000557538 NUCKS1Q9H1E3 243 aaKnown RBP2.98□□□□□ -1.93
HIF1A-212ENST00000557538 PARP3Q9Y6F1 533 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 H3BM21 787 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 PPFIA3O75145 1194 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 BMP1P13497 986 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 CCINQ13939 588 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 EAPPQ56P03 285 aaPredicted RBP2.98□□□□□ -1.93
HIF1A-212ENST00000557538 C6orf118Q5T5N4 469 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 OR13H1Q8NG92 308 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 KLRG1Q96E93 195 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 ZNF837Q96EG3 531 aaPredicted RBP2.98□□□□□ -1.93
HIF1A-212ENST00000557538 CHRDQ9H2X0 955 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 METTL5Q9NRN9 209 aaKnown RBP2.98□□□□□ -1.93
HIF1A-212ENST00000557538 BIN2Q9UBW5 565 aaPredicted RBP2.98□□□□□ -1.93
HIF1A-212ENST00000557538 DACH1Q9UI36 760 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 PHF24Q9UPV7 400 aa2.98□□□□□ -1.93
HIF1A-212ENST00000557538 RTCBQ9Y3I0 505 aaKnown RBP2.98□□□□□ -1.93
HIF1A-212ENST00000557538 UNCXA6NJT0 531 aa2.97□□□□□ -1.93
HIF1A-212ENST00000557538 PCSK7Q16549 785 aa2.97□□□□□ -1.93
HIF1A-212ENST00000557538 LDLRAD1Q5T700 205 aa2.97□□□□□ -1.93
HIF1A-212ENST00000557538 NGLY1Q96IV0 654 aa2.97□□□□□ -1.93
HIF1A-212ENST00000557538 ZFYVE1Q9HBF4 777 aa2.97□□□□□ -1.93
HIF1A-212ENST00000557538 SALL4Q9UJQ4 1053 aa2.97□□□□□ -1.93
HIF1A-212ENST00000557538 ST8SIA5O15466 376 aa2.97□□□□□ -1.93
HIF1A-212ENST00000557538 ST13P50502 369 aaKnown RBP2.97□□□□□ -1.93
HIF1A-212ENST00000557538 SCARA3Q6AZY7 606 aa2.97□□□□□ -1.93
HIF1A-212ENST00000557538 TNFRSF25Q93038 417 aa2.97□□□□□ -1.93
HIF1A-212ENST00000557538 CUEDC1Q9NWM3 386 aaPredicted RBP2.97□□□□□ -1.93
HIF1A-212ENST00000557538 SIN3BO75182 1162 aa2.96□□□□□ -1.93
HIF1A-212ENST00000557538 TNFRSF21O75509 655 aa2.96□□□□□ -1.93
HIF1A-212ENST00000557538 PHKA2P46019 1235 aa2.96□□□□□ -1.93
HIF1A-212ENST00000557538 TRIP4Q15650 581 aaPredicted RBP2.96□□□□□ -1.93
HIF1A-212ENST00000557538 LRRC69Q6ZNQ3 347 aa2.96□□□□□ -1.93
HIF1A-212ENST00000557538 TRPM4Q8TD43 1214 aa2.96□□□□□ -1.93
HIF1A-212ENST00000557538 BCL11AQ9H165 835 aa2.96□□□□□ -1.93
HIF1A-212ENST00000557538 NEUROD4Q9HD90 331 aa2.96□□□□□ -1.93
HIF1A-212ENST00000557538 ANO2Q9NQ90 1003 aa2.96□□□□□ -1.93
HIF1A-212ENST00000557538 TLR7Q9NYK1 1049 aaKnown RBP2.96□□□□□ -1.93
HIF1A-212ENST00000557538 HCN2Q9UL51 889 aa2.96□□□□□ -1.93
HIF1A-212ENST00000557538 AK5Q9Y6K8 562 aa2.96□□□□□ -1.93
HIF1A-212ENST00000557538 BNIP3LO60238 219 aa2.96□□□□□ -1.94
HIF1A-212ENST00000557538 MAN1A2O60476 641 aa2.96□□□□□ -1.94
HIF1A-212ENST00000557538 CPNE3O75131 537 aaKnown RBP2.96□□□□□ -1.94
HIF1A-212ENST00000557538 ARAFP10398 606 aa2.96□□□□□ -1.94
HIF1A-212ENST00000557538 MTMR3Q13615 1198 aa2.96□□□□□ -1.94
HIF1A-212ENST00000557538 RPS26P11Q5JNZ5 115 aaPredicted RBP2.96□□□□□ -1.94
HIF1A-212ENST00000557538 SV2AQ7L0J3 742 aa2.96□□□□□ -1.94
HIF1A-212ENST00000557538 NPM2Q86SE8 214 aaKnown RBP2.96□□□□□ -1.94
HIF1A-212ENST00000557538 NUDT16Q96DE0 195 aaKnown RBP2.96□□□□□ -1.94
HIF1A-212ENST00000557538 C8orf37Q96NL8 207 aa2.96□□□□□ -1.94
HIF1A-212ENST00000557538 BCL2L13Q9BXK5 485 aa2.96□□□□□ -1.94
HIF1A-212ENST00000557538 PRDM6Q9NQX0 595 aa2.96□□□□□ -1.94
HIF1A-212ENST00000557538 MARK1Q9P0L2 795 aa2.96□□□□□ -1.94
HIF1A-212ENST00000557538 KIAA1522Q9P206 1035 aaPredicted RBP2.96□□□□□ -1.94
HIF1A-212ENST00000557538 LGR5O75473 907 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms