RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 UTP14AQ9BVJ6 771 aaKnown RBP25.4■■□□□ 1.66
HIF1A-211ENST00000557446 SLX4Q8IY92 1834 aa25.4■■□□□ 1.66
HIF1A-211ENST00000557446 VAMP4O75379 141 aa25.39■■□□□ 1.66
HIF1A-211ENST00000557446 MASTLQ96GX5 879 aa25.39■■□□□ 1.66
HIF1A-211ENST00000557446 LAMB2P55268 1798 aa25.39■■□□□ 1.65
HIF1A-211ENST00000557446 RNF123Q5XPI4 1314 aa25.38■■□□□ 1.65
HIF1A-211ENST00000557446 KLRG2A4D1S0 409 aaPredicted RBP25.38■■□□□ 1.65
HIF1A-211ENST00000557446 DDX58O95786 925 aaKnown RBP25.38■■□□□ 1.65
HIF1A-211ENST00000557446 ATP5J2-PTCD1G3V325 749 aa25.37■■□□□ 1.65
HIF1A-211ENST00000557446 CNKSR1Q969H4 720 aa25.37■■□□□ 1.65
HIF1A-211ENST00000557446 ISCA1Q9BUE6 129 aa25.37■■□□□ 1.65
HIF1A-211ENST00000557446 E9PSI1 815 aa25.36■■□□□ 1.65
HIF1A-211ENST00000557446 SLC4A2P04920 1241 aa25.36■■□□□ 1.65
HIF1A-211ENST00000557446 NPR1P16066 1061 aa25.36■■□□□ 1.65
HIF1A-211ENST00000557446 DDX60Q8IY21 1712 aaKnown RBP25.36■■□□□ 1.65
HIF1A-211ENST00000557446 ZNF428Q96B54 188 aa25.35■■□□□ 1.65
HIF1A-211ENST00000557446 PRPF40BQ6NWY9 871 aaKnown RBP25.34■■□□□ 1.65
HIF1A-211ENST00000557446 G2E3Q7L622 706 aa25.34■■□□□ 1.65
HIF1A-211ENST00000557446 MYD88Q99836 296 aa25.34■■□□□ 1.65
HIF1A-211ENST00000557446 TRMT112Q9UI30 125 aaKnown RBP25.34■■□□□ 1.65
HIF1A-211ENST00000557446 SH3TC1Q8TE82 1336 aa25.34■■□□□ 1.65
HIF1A-211ENST00000557446 ADCY9O60503 1353 aa25.33■■□□□ 1.65
HIF1A-211ENST00000557446 SBF1O95248 1867 aa25.33■■□□□ 1.65
HIF1A-211ENST00000557446 SLFN5Q08AF3 891 aa25.33■■□□□ 1.65
HIF1A-211ENST00000557446 FER1L6Q2WGJ9 1857 aa25.33■■□□□ 1.65
HIF1A-211ENST00000557446 CRY2Q49AN0 593 aa25.33■■□□□ 1.65
HIF1A-211ENST00000557446 MAP3K2Q9Y2U5 619 aa25.33■■□□□ 1.65
HIF1A-211ENST00000557446 CDCA7LQ96GN5 454 aa25.32■■□□□ 1.64
HIF1A-211ENST00000557446 ZNF219Q9P2Y4 722 aaPredicted RBP25.32■■□□□ 1.64
HIF1A-211ENST00000557446 C21orf2O43822 256 aa25.31■■□□□ 1.64
HIF1A-211ENST00000557446 FLIIQ13045 1269 aa25.31■■□□□ 1.64
HIF1A-211ENST00000557446 TRIM28Q13263 835 aaKnown RBP25.31■■□□□ 1.64
HIF1A-211ENST00000557446 SLC10A5Q5PT55 438 aa25.31■■□□□ 1.64
HIF1A-211ENST00000557446 KSR2Q6VAB6 950 aa25.31■■□□□ 1.64
HIF1A-211ENST00000557446 C3orf67Q6ZVT6 689 aa25.31■■□□□ 1.64
HIF1A-211ENST00000557446 SYNE4Q8N205 404 aa25.31■■□□□ 1.64
HIF1A-211ENST00000557446 RPGRQ92834 1020 aaKnown RBP25.31■■□□□ 1.64
HIF1A-211ENST00000557446 METTL22Q9BUU2 404 aaPredicted RBP25.31■■□□□ 1.64
HIF1A-211ENST00000557446 PI4KAP2A4QPH2 592 aa25.3■■□□□ 1.64
HIF1A-211ENST00000557446 PI4KAP1Q8N8J0 262 aa25.3■■□□□ 1.64
HIF1A-211ENST00000557446 NLRP3Q96P20 1036 aa25.3■■□□□ 1.64
HIF1A-211ENST00000557446 CCDC88AQ3V6T2 1871 aa25.3■■□□□ 1.64
HIF1A-211ENST00000557446 RASSF7Q02833 373 aa25.29■■□□□ 1.64
HIF1A-211ENST00000557446 FKBP5Q13451 457 aaPredicted RBP25.29■■□□□ 1.64
HIF1A-211ENST00000557446 ZNF784Q8NCA9 323 aaPredicted RBP25.29■■□□□ 1.64
HIF1A-211ENST00000557446 HCLS1P14317 486 aaPredicted RBP25.28■■□□□ 1.64
HIF1A-211ENST00000557446 ALDH1B1P30837 517 aa25.28■■□□□ 1.64
HIF1A-211ENST00000557446 FAM89AQ96GI7 184 aa25.27■■□□□ 1.64
HIF1A-211ENST00000557446 TIAM2Q8IVF5 1701 aa25.26■■□□□ 1.63
HIF1A-211ENST00000557446 NFKBIEO00221 500 aa25.26■■□□□ 1.63
HIF1A-211ENST00000557446 NEXNQ0ZGT2 675 aa25.26■■□□□ 1.63
HIF1A-211ENST00000557446 RTL5Q5HYW3 569 aaPredicted RBP25.26■■□□□ 1.63
HIF1A-211ENST00000557446 CCDC191Q8NCU4 936 aa25.26■■□□□ 1.63
HIF1A-211ENST00000557446 RBM17Q96I25 401 aaKnown RBP25.26■■□□□ 1.63
HIF1A-211ENST00000557446 HOXA10P31260 410 aaPredicted RBP25.25■■□□□ 1.63
HIF1A-211ENST00000557446 SOGA3Q5TF21 947 aa25.25■■□□□ 1.63
HIF1A-211ENST00000557446 C9orf131Q5VYM1 1079 aa25.25■■□□□ 1.63
HIF1A-211ENST00000557446 CWC25Q9NXE8 425 aaPredicted RBP25.25■■□□□ 1.63
HIF1A-211ENST00000557446 IGKV5-2P06315 115 aa25.24■■□□□ 1.63
HIF1A-211ENST00000557446 HNRNPUQ00839 825 aaKnown RBP eCLIP25.24■■□□□ 1.637e-6■□□□□ 10.8
HIF1A-211ENST00000557446 ZBTB38Q8NAP3 1195 aaPredicted RBP25.24■■□□□ 1.63
HIF1A-211ENST00000557446 RNF181Q9P0P0 153 aa25.24■■□□□ 1.63
HIF1A-211ENST00000557446 CCDC93Q567U6 631 aa25.23■■□□□ 1.63
HIF1A-211ENST00000557446 TRMT2AQ8IZ69 625 aaKnown RBP25.23■■□□□ 1.63
HIF1A-211ENST00000557446 C7orf43Q8WVR3 580 aa25.23■■□□□ 1.63
HIF1A-211ENST00000557446 DNAAF4Q8WXU2 420 aa25.23■■□□□ 1.63
HIF1A-211ENST00000557446 CRAMP1Q96RY5 1269 aa25.23■■□□□ 1.63
HIF1A-211ENST00000557446 DICER1Q9UPY3 1922 aaKnown RBP25.22■■□□□ 1.63
HIF1A-211ENST00000557446 TAF1P21675 1872 aa25.22■■□□□ 1.63
HIF1A-211ENST00000557446 IRS4O14654 1257 aaPredicted RBP25.22■■□□□ 1.63
HIF1A-211ENST00000557446 NEURL1BA8MQ27 555 aa25.21■■□□□ 1.63
HIF1A-211ENST00000557446 PCCAP05165 728 aaPredicted RBP25.21■■□□□ 1.63
HIF1A-211ENST00000557446 CWF19L2Q2TBE0 894 aaKnown RBP25.21■■□□□ 1.63
HIF1A-211ENST00000557446 TAOK3Q9H2K8 898 aa25.21■■□□□ 1.63
HIF1A-211ENST00000557446 MYH3P11055 1940 aa25.2■■□□□ 1.62
HIF1A-211ENST00000557446 ABCC4O15439 1325 aa25.2■■□□□ 1.62
HIF1A-211ENST00000557446 LTBP3Q9NS15 1303 aa25.2■■□□□ 1.62
HIF1A-211ENST00000557446 LMNB1P20700 586 aa25.2■■□□□ 1.62
HIF1A-211ENST00000557446 PRELPP51888 382 aa25.2■■□□□ 1.62
HIF1A-211ENST00000557446 OLFM4Q6UX06 510 aa25.2■■□□□ 1.62
HIF1A-211ENST00000557446 F6X3S4 739 aa25.19■■□□□ 1.62
HIF1A-211ENST00000557446 PPEF1O14829 653 aaPredicted RBP25.19■■□□□ 1.62
HIF1A-211ENST00000557446 JARID2Q92833 1246 aaPredicted RBP25.19■■□□□ 1.62
HIF1A-211ENST00000557446 DDX46Q7L014 1031 aaKnown RBP25.18■■□□□ 1.62
HIF1A-211ENST00000557446 ZNF526Q8TF50 670 aaPredicted RBP25.18■■□□□ 1.62
HIF1A-211ENST00000557446 SNED1Q8TER0 1413 aa25.18■■□□□ 1.62
HIF1A-211ENST00000557446 CDHR2Q9BYE9 1310 aa25.17■■□□□ 1.62
HIF1A-211ENST00000557446 HSP90B1P14625 803 aaKnown RBP25.17■■□□□ 1.62
HIF1A-211ENST00000557446 SF3B3Q15393 1217 aaKnown RBP25.17■■□□□ 1.62
HIF1A-211ENST00000557446 MRPL50Q8N5N7 158 aaKnown RBP25.17■■□□□ 1.62
HIF1A-211ENST00000557446 LRRC37AA6NMS7 1700 aa25.16■■□□□ 1.62
HIF1A-211ENST00000557446 RTKN2Q8IZC4 609 aa25.16■■□□□ 1.62
HIF1A-211ENST00000557446 LINS1Q8NG48 757 aa25.16■■□□□ 1.62
HIF1A-211ENST00000557446 SSH1Q8WYL5 1049 aa25.16■■□□□ 1.62
HIF1A-211ENST00000557446 BCL2L13Q9BXK5 485 aa25.16■■□□□ 1.62
HIF1A-211ENST00000557446 CT47B1P0C2W7 299 aaPredicted RBP25.15■■□□□ 1.62
HIF1A-211ENST00000557446 FKBP4Q02790 459 aaKnown RBP eCLIP25.15■■□□□ 1.62
HIF1A-211ENST00000557446 GRAPQ13588 217 aa25.15■■□□□ 1.62
HIF1A-211ENST00000557446 CC2D2BQ6DHV5 1058 aa25.15■■□□□ 1.62
HIF1A-211ENST00000557446 SLC51AQ86UW1 340 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms