RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 RNF123Q5XPI4 1314 aa18.49■□□□□ 0.55
SNX6-210ENST00000557341 POTECB2RU33 542 aa18.49■□□□□ 0.55
SNX6-210ENST00000557341 OLFM4Q6UX06 510 aa18.49■□□□□ 0.55
SNX6-210ENST00000557341 PCNTO95613 3336 aa18.49■□□□□ 0.55
SNX6-210ENST00000557341 LRRC37AA6NMS7 1700 aa18.49■□□□□ 0.55
SNX6-210ENST00000557341 ADAMTSL1Q8N6G6 1762 aa18.48■□□□□ 0.55
SNX6-210ENST00000557341 DDNO94850 711 aaPredicted RBP18.48■□□□□ 0.55
SNX6-210ENST00000557341 HOXA10P31260 410 aaPredicted RBP18.48■□□□□ 0.55
SNX6-210ENST00000557341 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
SNX6-210ENST00000557341 HSP90AB3PQ58FF7 597 aa18.48■□□□□ 0.55
SNX6-210ENST00000557341 DNAJC5GQ8N7S2 189 aa18.48■□□□□ 0.55
SNX6-210ENST00000557341 DDX21Q9NR30 783 aaKnown RBP eCLIP18.48■□□□□ 0.55
SNX6-210ENST00000557341 ZNF277Q9NRM2 450 aaPredicted RBP18.48■□□□□ 0.55
SNX6-210ENST00000557341 HOXB7P09629 217 aa18.47■□□□□ 0.55
SNX6-210ENST00000557341 CC2D2BQ6DHV5 1058 aa18.47■□□□□ 0.55
SNX6-210ENST00000557341 COPS6Q7L5N1 327 aa18.47■□□□□ 0.55
SNX6-210ENST00000557341 IARSP41252 1262 aaKnown RBP18.46■□□□□ 0.55
SNX6-210ENST00000557341 HTRA3P83110 453 aa18.46■□□□□ 0.55
SNX6-210ENST00000557341 AIMP1Q12904 312 aaKnown RBP18.46■□□□□ 0.55
SNX6-210ENST00000557341 HDGFL1Q5TGJ6 251 aa18.46■□□□□ 0.55
SNX6-210ENST00000557341 XAGE3Q8WTP9 111 aa18.46■□□□□ 0.55
SNX6-210ENST00000557341 RBM17Q96I25 401 aaKnown RBP18.46■□□□□ 0.55
SNX6-210ENST00000557341 CFAP44Q96MT7 982 aa18.46■□□□□ 0.55
SNX6-210ENST00000557341 PSMD1Q99460 953 aa18.46■□□□□ 0.55
SNX6-210ENST00000557341 UTP14AQ9BVJ6 771 aaKnown RBP18.46■□□□□ 0.55
SNX6-210ENST00000557341 CHPF2Q9P2E5 772 aa18.46■□□□□ 0.55
SNX6-210ENST00000557341 COL4A5P29400 1685 aa18.45■□□□□ 0.54
SNX6-210ENST00000557341 IQCA1LA6NCM1 817 aa18.45■□□□□ 0.54
SNX6-210ENST00000557341 L3MBTL3Q96JM7 780 aaPredicted RBP18.45■□□□□ 0.54
SNX6-210ENST00000557341 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
SNX6-210ENST00000557341 CRAMP1Q96RY5 1269 aa18.45■□□□□ 0.54
SNX6-210ENST00000557341 ZNF541Q9H0D2 1346 aa18.45■□□□□ 0.54
SNX6-210ENST00000557341 PPEF1O14829 653 aaPredicted RBP18.44■□□□□ 0.54
SNX6-210ENST00000557341 GRIPAP1Q4V328 841 aa18.44■□□□□ 0.54
SNX6-210ENST00000557341 SYNE4Q8N205 404 aa18.44■□□□□ 0.54
SNX6-210ENST00000557341 KLRG1Q96E93 195 aa18.44■□□□□ 0.54
SNX6-210ENST00000557341 C3orf67Q6ZVT6 689 aa18.43■□□□□ 0.54
SNX6-210ENST00000557341 NLRP10Q86W26 655 aa18.43■□□□□ 0.54
SNX6-210ENST00000557341 MBIPQ9NS73 344 aa18.43■□□□□ 0.54
SNX6-210ENST00000557341 DBF4Q9UBU7 674 aaPredicted RBP18.43■□□□□ 0.54
SNX6-210ENST00000557341 APAF1O14727 1248 aa18.42■□□□□ 0.54
SNX6-210ENST00000557341 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
SNX6-210ENST00000557341 TCIRG1Q13488 830 aa18.42■□□□□ 0.54
SNX6-210ENST00000557341 SLC10A5Q5PT55 438 aa18.42■□□□□ 0.54
SNX6-210ENST00000557341 JDP2Q8WYK2 163 aa18.42■□□□□ 0.54
SNX6-210ENST00000557341 MYH3P11055 1940 aa18.42■□□□□ 0.54
SNX6-210ENST00000557341 LTBP1Q14766 1721 aa18.42■□□□□ 0.54
SNX6-210ENST00000557341 FZD9O00144 591 aa18.41■□□□□ 0.54
SNX6-210ENST00000557341 CHADLQ6NUI6 762 aa18.41■□□□□ 0.54
SNX6-210ENST00000557341 PLBD2Q8NHP8 589 aa18.41■□□□□ 0.54
SNX6-210ENST00000557341 IFT57Q9NWB7 429 aa18.41■□□□□ 0.54
SNX6-210ENST00000557341 ABCC4O15439 1325 aa18.41■□□□□ 0.54
SNX6-210ENST00000557341 SH3TC1Q8TE82 1336 aa18.41■□□□□ 0.54
SNX6-210ENST00000557341 CACNA1FO60840 1977 aa18.41■□□□□ 0.54
SNX6-210ENST00000557341 ZNF853P0CG23 659 aa18.4■□□□□ 0.54
SNX6-210ENST00000557341 DUSP27Q5VZP5 1158 aa18.4■□□□□ 0.54
SNX6-210ENST00000557341 TMX4Q9H1E5 349 aaPredicted RBP18.4■□□□□ 0.54
SNX6-210ENST00000557341 TAF1DQ9H5J8 278 aaPredicted RBP18.4■□□□□ 0.54
SNX6-210ENST00000557341 TRMT112Q9UI30 125 aaKnown RBP18.4■□□□□ 0.54
SNX6-210ENST00000557341 TCERG1O14776 1098 aaKnown RBP18.39■□□□□ 0.53
SNX6-210ENST00000557341 POTEIP0CG38 1075 aa18.39■□□□□ 0.53
SNX6-210ENST00000557341 POTEJP0CG39 1038 aa18.39■□□□□ 0.53
SNX6-210ENST00000557341 GNAI1P63096 354 aa18.39■□□□□ 0.53
SNX6-210ENST00000557341 LDHDQ86WU2 507 aa18.39■□□□□ 0.53
SNX6-210ENST00000557341 GPC2Q8N158 579 aa18.39■□□□□ 0.53
SNX6-210ENST00000557341 HYPKQ9NX55 129 aa18.39■□□□□ 0.53
SNX6-210ENST00000557341 TRPM7Q96QT4 1865 aa18.39■□□□□ 0.53
SNX6-210ENST00000557341 ANKRD13DQ6ZTN6 518 aa18.38■□□□□ 0.53
SNX6-210ENST00000557341 SLC51AQ86UW1 340 aa18.38■□□□□ 0.53
SNX6-210ENST00000557341 JMYQ8N9B5 988 aa18.38■□□□□ 0.53
SNX6-210ENST00000557341 HACL1Q9UJ83 578 aa18.38■□□□□ 0.53
SNX6-210ENST00000557341 ATP6V0A2Q9Y487 856 aa18.38■□□□□ 0.53
SNX6-210ENST00000557341 DUOX1Q9NRD9 1551 aa18.38■□□□□ 0.53
SNX6-210ENST00000557341 SPEF2Q9C093 1822 aa18.37■□□□□ 0.53
SNX6-210ENST00000557341 HCLS1P14317 486 aaPredicted RBP18.37■□□□□ 0.53
SNX6-210ENST00000557341 ZEB1P37275 1124 aaPredicted RBP18.37■□□□□ 0.53
SNX6-210ENST00000557341 EIF6P56537 245 aaKnown RBP18.37■□□□□ 0.53
SNX6-210ENST00000557341 LARGE2Q8N3Y3 721 aa18.37■□□□□ 0.53
SNX6-210ENST00000557341 EPHX2P34913 555 aa18.36■□□□□ 0.53
SNX6-210ENST00000557341 DDX46Q7L014 1031 aaKnown RBP18.36■□□□□ 0.53
SNX6-210ENST00000557341 PPIP5K2O43314 1243 aa18.35■□□□□ 0.53
SNX6-210ENST00000557341 EAPPQ56P03 285 aaPredicted RBP18.35■□□□□ 0.53
SNX6-210ENST00000557341 NIM1KQ8IY84 436 aa18.35■□□□□ 0.53
SNX6-210ENST00000557341 ISCA1Q9BUE6 129 aa18.35■□□□□ 0.53
SNX6-210ENST00000557341 COL4A1P02462 1669 aa18.34■□□□□ 0.53
SNX6-210ENST00000557341 BBOX1O75936 387 aa18.34■□□□□ 0.53
SNX6-210ENST00000557341 GOLGA2Q08379 1002 aa18.34■□□□□ 0.53
SNX6-210ENST00000557341 GRAPQ13588 217 aa18.34■□□□□ 0.53
SNX6-210ENST00000557341 PNMA8AQ86V59 439 aaPredicted RBP18.34■□□□□ 0.53
SNX6-210ENST00000557341 SUPT20HQ8NEM7 779 aa18.34■□□□□ 0.53
SNX6-210ENST00000557341 GRAPLQ8TC17 118 aaPredicted RBP18.34■□□□□ 0.53
SNX6-210ENST00000557341 VPS33BQ9H267 617 aa18.34■□□□□ 0.53
SNX6-210ENST00000557341 CREBZFQ9NS37 354 aa18.34■□□□□ 0.53
SNX6-210ENST00000557341 GJA3Q9Y6H8 435 aa18.34■□□□□ 0.53
SNX6-210ENST00000557341 ATP5J2-PTCD1G3V325 749 aa18.33■□□□□ 0.52
SNX6-210ENST00000557341 LMOD1P29536 600 aaPredicted RBP18.33■□□□□ 0.52
SNX6-210ENST00000557341 AOC3Q16853 763 aa18.33■□□□□ 0.52
SNX6-210ENST00000557341 IFFO2Q5TF58 517 aa18.33■□□□□ 0.52
SNX6-210ENST00000557341 DPP8Q6V1X1 898 aaPredicted RBP18.33■□□□□ 0.52
SNX6-210ENST00000557341 SP8Q8IXZ3 490 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms