RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	NGEF	Q8N5V2	710 aa		14.8	□□□□□ -0.04
HNRNPC-231	ENST00000557336	ABCC12	Q96J65	1359 aa		14.8	□□□□□ -0.04
HNRNPC-231	ENST00000557336	ARFGEF2	Q9Y6D5	1785 aa		14.8	□□□□□ -0.04
HNRNPC-231	ENST00000557336	ERVV-1	B6SEH8	477 aa		14.79	□□□□□ -0.04
HNRNPC-231	ENST00000557336	CRY2	Q49AN0	593 aa		14.79	□□□□□ -0.04
HNRNPC-231	ENST00000557336	DPY19L2	Q6NUT2	758 aa		14.79	□□□□□ -0.04
HNRNPC-231	ENST00000557336	UBN2	Q6ZU65	1347 aa		14.79	□□□□□ -0.04
HNRNPC-231	ENST00000557336	SLC51A	Q86UW1	340 aa		14.79	□□□□□ -0.04
HNRNPC-231	ENST00000557336	PNISR	Q8TF01	805 aa	Known RBP	14.79	□□□□□ -0.04
HNRNPC-231	ENST00000557336	RRP7A	Q9Y3A4	280 aa	Known RBP	14.79	□□□□□ -0.04
HNRNPC-231	ENST00000557336	MAP3K15	Q6ZN16	1313 aa		14.78	□□□□□ -0.04
HNRNPC-231	ENST00000557336	PDIA6	Q15084	440 aa		14.78	□□□□□ -0.04
HNRNPC-231	ENST00000557336	CCDC93	Q567U6	631 aa		14.78	□□□□□ -0.04
HNRNPC-231	ENST00000557336	SOGA3	Q5TF21	947 aa		14.78	□□□□□ -0.04
HNRNPC-231	ENST00000557336	NUTM1	Q86Y26	1132 aa		14.78	□□□□□ -0.04
HNRNPC-231	ENST00000557336	LAMB4	A4D0S4	1761 aa		14.78	□□□□□ -0.04
HNRNPC-231	ENST00000557336	MYL6B	P14649	208 aa		14.77	□□□□□ -0.05
HNRNPC-231	ENST00000557336	FKBP4	Q02790	459 aa	Known RBP eCLIP	14.77	□□□□□ -0.05
HNRNPC-231	ENST00000557336	ZNF277	Q9NRM2	450 aa	Predicted RBP	14.77	□□□□□ -0.05
HNRNPC-231	ENST00000557336	CACNA1S	Q13698	1873 aa		14.77	□□□□□ -0.05
HNRNPC-231	ENST00000557336	ZNF541	Q9H0D2	1346 aa		14.76	□□□□□ -0.05
HNRNPC-231	ENST00000557336	GPT	P24298	496 aa		14.76	□□□□□ -0.05
HNRNPC-231	ENST00000557336	SUSD4	Q5VX71	490 aa		14.76	□□□□□ -0.05
HNRNPC-231	ENST00000557336	C3orf67	Q6ZVT6	689 aa		14.76	□□□□□ -0.05
HNRNPC-231	ENST00000557336	ZNF34	Q8IZ26	560 aa		14.76	□□□□□ -0.05
HNRNPC-231	ENST00000557336	L3MBTL3	Q96JM7	780 aa	Predicted RBP	14.76	□□□□□ -0.05
HNRNPC-231	ENST00000557336	ZBTB3	Q9H5J0	574 aa		14.76	□□□□□ -0.05
HNRNPC-231	ENST00000557336	CD44	P16070	742 aa	Known RBP	14.75	□□□□□ -0.05
HNRNPC-231	ENST00000557336	HOXA10	P31260	410 aa	Predicted RBP	14.75	□□□□□ -0.05
HNRNPC-231	ENST00000557336	COL13A1	Q5TAT6	717 aa	Predicted RBP	14.75	□□□□□ -0.05
HNRNPC-231	ENST00000557336	RASEF	Q8IZ41	740 aa		14.75	□□□□□ -0.05
HNRNPC-231	ENST00000557336	NTSR2	O95665	410 aa		14.74	□□□□□ -0.05
HNRNPC-231	ENST00000557336	NUBP1	P53384	320 aa		14.74	□□□□□ -0.05
HNRNPC-231	ENST00000557336	PROSER3	Q2NL68	480 aa		14.74	□□□□□ -0.05
HNRNPC-231	ENST00000557336	TAF1D	Q9H5J8	278 aa	Predicted RBP	14.74	□□□□□ -0.05
HNRNPC-231	ENST00000557336	COL4A5	P29400	1685 aa		14.74	□□□□□ -0.05
HNRNPC-231	ENST00000557336	RIC1	Q4ADV7	1423 aa		14.74	□□□□□ -0.05
HNRNPC-231	ENST00000557336	NUP98	P52948	1817 aa		14.73	□□□□□ -0.05
HNRNPC-231	ENST00000557336	FZD9	O00144	591 aa		14.73	□□□□□ -0.05
HNRNPC-231	ENST00000557336	ANXA1	P04083	346 aa		14.73	□□□□□ -0.05
HNRNPC-231	ENST00000557336	NEFM	P07197	916 aa		14.73	□□□□□ -0.05
HNRNPC-231	ENST00000557336	ALDH1B1	P30837	517 aa		14.73	□□□□□ -0.05
HNRNPC-231	ENST00000557336	TMPO	P42166	694 aa	Known RBP	14.73	□□□□□ -0.05
HNRNPC-231	ENST00000557336	RIPK4	P57078	832 aa		14.73	□□□□□ -0.05
HNRNPC-231	ENST00000557336	GIGYF2	Q6Y7W6	1299 aa	Known RBP	14.73	□□□□□ -0.05
HNRNPC-231	ENST00000557336	RTKN2	Q8IZC4	609 aa		14.73	□□□□□ -0.05
HNRNPC-231	ENST00000557336	SYNE4	Q8N205	404 aa		14.73	□□□□□ -0.05
HNRNPC-231	ENST00000557336	TSPYL4	Q9UJ04	414 aa		14.73	□□□□□ -0.05
HNRNPC-231	ENST00000557336	IBTK	Q9P2D0	1353 aa	Predicted RBP	14.73	□□□□□ -0.05
HNRNPC-231	ENST00000557336	ERBB4	Q15303	1308 aa		14.72	□□□□□ -0.05
HNRNPC-231	ENST00000557336	MAPK8IP3	Q9UPT6	1336 aa		14.72	□□□□□ -0.05
HNRNPC-231	ENST00000557336	GTF2E1	P29083	439 aa	Predicted RBP	14.72	□□□□□ -0.05
HNRNPC-231	ENST00000557336	IARS	P41252	1262 aa	Known RBP	14.72	□□□□□ -0.05
HNRNPC-231	ENST00000557336	RALBP1	Q15311	655 aa		14.72	□□□□□ -0.05
HNRNPC-231	ENST00000557336	KIF6	Q6ZMV9	814 aa		14.72	□□□□□ -0.05
HNRNPC-231	ENST00000557336	NYX	Q9GZU5	481 aa		14.72	□□□□□ -0.05
HNRNPC-231	ENST00000557336	PNN	Q9H307	717 aa	Known RBP	14.72	□□□□□ -0.05
HNRNPC-231	ENST00000557336	PASK	Q96RG2	1323 aa		14.71	□□□□□ -0.05
HNRNPC-231	ENST00000557336	ITGBL1	O95965	494 aa	Predicted RBP	14.71	□□□□□ -0.05
HNRNPC-231	ENST00000557336	KRT24	Q2M2I5	525 aa		14.71	□□□□□ -0.05
HNRNPC-231	ENST00000557336	PSMD1	Q99460	953 aa		14.71	□□□□□ -0.05
HNRNPC-231	ENST00000557336	EIF2S2	P20042	333 aa	Known RBP	14.7	□□□□□ -0.06
HNRNPC-231	ENST00000557336	SLC10A5	Q5PT55	438 aa		14.7	□□□□□ -0.06
HNRNPC-231	ENST00000557336	BABAM1	Q9NWV8	329 aa		14.7	□□□□□ -0.06
HNRNPC-231	ENST00000557336	TRIM35	Q9UPQ4	493 aa		14.7	□□□□□ -0.06
HNRNPC-231	ENST00000557336	IQCA1L	A6NCM1	817 aa		14.69	□□□□□ -0.06
HNRNPC-231	ENST00000557336	CHL1	O00533	1208 aa		14.69	□□□□□ -0.06
HNRNPC-231	ENST00000557336	DDX10	Q13206	875 aa	Known RBP	14.69	□□□□□ -0.06
HNRNPC-231	ENST00000557336	LDHD	Q86WU2	507 aa		14.69	□□□□□ -0.06
HNRNPC-231	ENST00000557336	CRAMP1	Q96RY5	1269 aa		14.69	□□□□□ -0.06
HNRNPC-231	ENST00000557336	HSPA1A	P0DMV8	641 aa	Known RBP	14.68	□□□□□ -0.06
HNRNPC-231	ENST00000557336	HSPA1B	P0DMV9	641 aa	Known RBP	14.68	□□□□□ -0.06
HNRNPC-231	ENST00000557336	CCDC146	Q8IYE0	955 aa		14.68	□□□□□ -0.06
HNRNPC-231	ENST00000557336	ADAMTSL1	Q8N6G6	1762 aa		14.68	□□□□□ -0.06
HNRNPC-231	ENST00000557336	RNF123	Q5XPI4	1314 aa		14.67	□□□□□ -0.06
HNRNPC-231	ENST00000557336	SCN4A	P35499	1836 aa		14.67	□□□□□ -0.06
HNRNPC-231	ENST00000557336	EPHX2	P34913	555 aa		14.67	□□□□□ -0.06
HNRNPC-231	ENST00000557336	PARP10	Q53GL7	1025 aa		14.67	□□□□□ -0.06
HNRNPC-231	ENST00000557336	CC2D2B	Q6DHV5	1058 aa		14.67	□□□□□ -0.06
HNRNPC-231	ENST00000557336	COPS6	Q7L5N1	327 aa		14.67	□□□□□ -0.06
HNRNPC-231	ENST00000557336	NECTIN2	Q92692	538 aa		14.67	□□□□□ -0.06
HNRNPC-231	ENST00000557336	RPGR	Q92834	1020 aa	Known RBP	14.67	□□□□□ -0.06
HNRNPC-231	ENST00000557336	ZBTB47	Q9UFB7	747 aa	Predicted RBP	14.67	□□□□□ -0.06
HNRNPC-231	ENST00000557336	MKRN1	Q9UHC7	482 aa	Known RBP	14.67	□□□□□ -0.06
HNRNPC-231	ENST00000557336	HACL1	Q9UJ83	578 aa		14.67	□□□□□ -0.06
HNRNPC-231	ENST00000557336	MYBBP1A	Q9BQG0	1328 aa	Known RBP	14.66	□□□□□ -0.06
HNRNPC-231	ENST00000557336	TCERG1	O14776	1098 aa	Known RBP	14.66	□□□□□ -0.06
HNRNPC-231	ENST00000557336	NLRP10	Q86W26	655 aa		14.66	□□□□□ -0.06
HNRNPC-231	ENST00000557336	GPC2	Q8N158	579 aa		14.66	□□□□□ -0.06
HNRNPC-231	ENST00000557336	XAGE3	Q8WTP9	111 aa		14.66	□□□□□ -0.06
HNRNPC-231	ENST00000557336	TSPYL2	Q9H2G4	693 aa	Predicted RBP	14.66	□□□□□ -0.06
HNRNPC-231	ENST00000557336	LTBP1	Q14766	1721 aa		14.66	□□□□□ -0.06
HNRNPC-231	ENST00000557336	PPEF1	O14829	653 aa	Predicted RBP	14.65	□□□□□ -0.06
HNRNPC-231	ENST00000557336	NEUROD2	Q15784	382 aa		14.65	□□□□□ -0.06
HNRNPC-231	ENST00000557336	EAPP	Q56P03	285 aa	Predicted RBP	14.65	□□□□□ -0.06
HNRNPC-231	ENST00000557336	PPP1R42	Q7Z4L9	355 aa		14.65	□□□□□ -0.06
HNRNPC-231	ENST00000557336	RBM17	Q96I25	401 aa	Known RBP	14.65	□□□□□ -0.06
HNRNPC-231	ENST00000557336	UTP14A	Q9BVJ6	771 aa	Known RBP	14.65	□□□□□ -0.06
HNRNPC-231	ENST00000557336	DDX21	Q9NR30	783 aa	Known RBP eCLIP	14.65	□□□□□ -0.06
HNRNPC-231	ENST00000557336	ADAMTS8	Q9UP79	889 aa		14.65	□□□□□ -0.06

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