RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 RNF123Q5XPI4 1314 aa13.57□□□□□ -0.24
RDH11-210ENST00000557331 RIC1Q4ADV7 1423 aa13.56□□□□□ -0.24
RDH11-210ENST00000557331 MAP2K2P36507 400 aa13.56□□□□□ -0.24
RDH11-210ENST00000557331 MAP1SQ66K74 1059 aaPredicted RBP13.56□□□□□ -0.24
RDH11-210ENST00000557331 PNNQ9H307 717 aaKnown RBP13.56□□□□□ -0.24
RDH11-210ENST00000557331 CACNA1SQ13698 1873 aa13.55□□□□□ -0.24
RDH11-210ENST00000557331 HSPA8P11142 646 aaKnown RBP13.55□□□□□ -0.24
RDH11-210ENST00000557331 MCM10Q7L590 875 aa13.55□□□□□ -0.24
RDH11-210ENST00000557331 LARGE2Q8N3Y3 721 aa13.55□□□□□ -0.24
RDH11-210ENST00000557331 SUPT20HQ8NEM7 779 aa13.55□□□□□ -0.24
RDH11-210ENST00000557331 ADAMTSL1Q8N6G6 1762 aa13.54□□□□□ -0.24
RDH11-210ENST00000557331 PIP4K2AP48426 406 aaPredicted RBP13.54□□□□□ -0.24
RDH11-210ENST00000557331 HLFQ16534 295 aa13.54□□□□□ -0.24
RDH11-210ENST00000557331 PARP10Q53GL7 1025 aa13.54□□□□□ -0.24
RDH11-210ENST00000557331 PPP1R42Q7Z4L9 355 aa13.54□□□□□ -0.24
RDH11-210ENST00000557331 NIM1KQ8IY84 436 aa13.54□□□□□ -0.24
RDH11-210ENST00000557331 ABHD8Q96I13 439 aa13.54□□□□□ -0.24
RDH11-210ENST00000557331 HHIPL1Q96JK4 782 aa13.54□□□□□ -0.24
RDH11-210ENST00000557331 GPR101Q96P66 508 aaPredicted RBP13.54□□□□□ -0.24
RDH11-210ENST00000557331 GJA3Q9Y6H8 435 aa13.54□□□□□ -0.24
RDH11-210ENST00000557331 ERBB4Q15303 1308 aa13.54□□□□□ -0.24
RDH11-210ENST00000557331 MAP3K15Q6ZN16 1313 aa13.54□□□□□ -0.24
RDH11-210ENST00000557331 PRAMEF22A3QJZ6 481 aa13.53□□□□□ -0.24
RDH11-210ENST00000557331 FAM177BA6PVY3 158 aa13.53□□□□□ -0.24
RDH11-210ENST00000557331 CAPNS2Q96L46 248 aa13.53□□□□□ -0.24
RDH11-210ENST00000557331 NLRP3Q96P20 1036 aa13.53□□□□□ -0.24
RDH11-210ENST00000557331 ADARB2Q9NS39 739 aaKnown RBP13.53□□□□□ -0.24
RDH11-210ENST00000557331 CDHR2Q9BYE9 1310 aa13.53□□□□□ -0.24
RDH11-210ENST00000557331 ZC3H15Q8WU90 426 aaKnown RBP13.52□□□□□ -0.25
RDH11-210ENST00000557331 SNED1Q8TER0 1413 aa13.51□□□□□ -0.25
RDH11-210ENST00000557331 PPEF1O14829 653 aaPredicted RBP13.51□□□□□ -0.25
RDH11-210ENST00000557331 BBOX1O75936 387 aa13.51□□□□□ -0.25
RDH11-210ENST00000557331 SCNN1DP51172 638 aa13.51□□□□□ -0.25
RDH11-210ENST00000557331 OLFM4Q6UX06 510 aa13.51□□□□□ -0.25
RDH11-210ENST00000557331 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
RDH11-210ENST00000557331 TLL2Q9Y6L7 1015 aa13.51□□□□□ -0.25
RDH11-210ENST00000557331 PPIP5K2O43314 1243 aa13.5□□□□□ -0.25
RDH11-210ENST00000557331 PPP2R1AP30153 589 aa13.5□□□□□ -0.25
RDH11-210ENST00000557331 RGS19P49795 217 aa13.5□□□□□ -0.25
RDH11-210ENST00000557331 SLC10A5Q5PT55 438 aa13.5□□□□□ -0.25
RDH11-210ENST00000557331 GIGYF2Q6Y7W6 1299 aaKnown RBP13.5□□□□□ -0.25
RDH11-210ENST00000557331 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
RDH11-210ENST00000557331 ZNF34Q8IZ26 560 aa13.5□□□□□ -0.25
RDH11-210ENST00000557331 ZNRF3Q9ULT6 936 aa13.5□□□□□ -0.25
RDH11-210ENST00000557331 ATP6V0A2Q9Y487 856 aa13.5□□□□□ -0.25
RDH11-210ENST00000557331 EPS15P42566 896 aa13.49□□□□□ -0.25
RDH11-210ENST00000557331 MLLT1Q03111 559 aaPredicted RBP13.49□□□□□ -0.25
RDH11-210ENST00000557331 CNGB1Q14028 1251 aaPredicted RBP13.49□□□□□ -0.25
RDH11-210ENST00000557331 TNIP1Q15025 636 aa13.49□□□□□ -0.25
RDH11-210ENST00000557331 HSP90AB3PQ58FF7 597 aa13.49□□□□□ -0.25
RDH11-210ENST00000557331 TMC4Q7Z404 712 aa13.49□□□□□ -0.25
RDH11-210ENST00000557331 RTFDC1Q9BY42 306 aaPredicted RBP13.49□□□□□ -0.25
RDH11-210ENST00000557331 BABAM1Q9NWV8 329 aa13.49□□□□□ -0.25
RDH11-210ENST00000557331 GPRC5DQ9NZD1 345 aa13.49□□□□□ -0.25
RDH11-210ENST00000557331 PGAP2Q9UHJ9 254 aa13.49□□□□□ -0.25
RDH11-210ENST00000557331 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
RDH11-210ENST00000557331 SLC34A2O95436 690 aa13.48□□□□□ -0.25
RDH11-210ENST00000557331 BRPF1P55201 1214 aaPredicted RBP13.48□□□□□ -0.25
RDH11-210ENST00000557331 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
RDH11-210ENST00000557331 DCTN1Q14203 1278 aa13.48□□□□□ -0.25
RDH11-210ENST00000557331 CST9Q5W186 159 aa13.48□□□□□ -0.25
RDH11-210ENST00000557331 NGEFQ8N5V2 710 aa13.48□□□□□ -0.25
RDH11-210ENST00000557331 UTP14AQ9BVJ6 771 aaKnown RBP13.48□□□□□ -0.25
RDH11-210ENST00000557331 ABCC12Q96J65 1359 aa13.47□□□□□ -0.25
RDH11-210ENST00000557331 TRPM7Q96QT4 1865 aa13.47□□□□□ -0.25
RDH11-210ENST00000557331 SUSD4Q5VX71 490 aa13.47□□□□□ -0.25
RDH11-210ENST00000557331 CDC37L1Q7L3B6 337 aa13.47□□□□□ -0.25
RDH11-210ENST00000557331 SAPCD2Q86UD0 394 aa13.47□□□□□ -0.25
RDH11-210ENST00000557331 SP8Q8IXZ3 490 aa13.47□□□□□ -0.25
RDH11-210ENST00000557331 NUP98P52948 1817 aa13.47□□□□□ -0.25
RDH11-210ENST00000557331 CCDC85CA6NKD9 419 aa13.46□□□□□ -0.25
RDH11-210ENST00000557331 NTSR2O95665 410 aa13.46□□□□□ -0.25
RDH11-210ENST00000557331 GPTP24298 496 aa13.46□□□□□ -0.25
RDH11-210ENST00000557331 CYP4F22Q6NT55 531 aa13.46□□□□□ -0.25
RDH11-210ENST00000557331 DPP8Q6V1X1 898 aaPredicted RBP13.46□□□□□ -0.25
RDH11-210ENST00000557331 TTLL7Q6ZT98 887 aa13.46□□□□□ -0.25
RDH11-210ENST00000557331 MIS18AQ9NYP9 233 aa13.46□□□□□ -0.25
RDH11-210ENST00000557331 PCDH10Q9P2E7 1040 aa13.46□□□□□ -0.25
RDH11-210ENST00000557331 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 UBN2Q6ZU65 1347 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 H7C1D1 291 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 CELF2O95319 508 aaKnown RBP13.45□□□□□ -0.26
RDH11-210ENST00000557331 MYL6BP14649 208 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 CXCL9Q07325 125 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 KIAA2012Q0VF49 1180 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 NOGQ13253 232 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 NFE2L2Q16236 605 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 FAM161AQ3B820 660 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 CIAPIN1Q6FI81 312 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 MPNDQ8N594 471 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 BCL2L13Q9BXK5 485 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 ZBTB3Q9H5J0 574 aa13.45□□□□□ -0.26
RDH11-210ENST00000557331 MAPK8IP3Q9UPT6 1336 aa13.44□□□□□ -0.26
RDH11-210ENST00000557331 THSD7BQ9C0I4 1608 aa13.44□□□□□ -0.26
RDH11-210ENST00000557331 AOC3Q16853 763 aa13.44□□□□□ -0.26
RDH11-210ENST00000557331 DDX46Q7L014 1031 aaKnown RBP13.44□□□□□ -0.26
RDH11-210ENST00000557331 DPF2Q92785 391 aa13.44□□□□□ -0.26
RDH11-210ENST00000557331 PDE4DIPQ5VU43 2346 aa13.44□□□□□ -0.26
RDH11-210ENST00000557331 TRAF5O00463 557 aa13.43□□□□□ -0.26
RDH11-210ENST00000557331 GMPSP49915 693 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms