RNA–Protein interactions for RNA: ENST00000556986.1

KLC1-221, Transcript of kinesin light chain 1, humanhuman

TSL 1 (best)

Gene KLC1, Length 1,150 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-221ENST00000556986 NPR1P16066 1061 aa27.84■■■□□ 2.05
KLC1-221ENST00000556986 CRY2Q49AN0 593 aa27.84■■■□□ 2.05
KLC1-221ENST00000556986 CCDC88AQ3V6T2 1871 aa27.83■■■□□ 2.05
KLC1-221ENST00000556986 UTP14AQ9BVJ6 771 aaKnown RBP27.83■■■□□ 2.05
KLC1-221ENST00000556986 SLC10A5Q5PT55 438 aa27.82■■■□□ 2.04
KLC1-221ENST00000556986 ISCA1Q9BUE6 129 aa27.82■■■□□ 2.04
KLC1-221ENST00000556986 RNF123Q5XPI4 1314 aa27.82■■■□□ 2.04
KLC1-221ENST00000556986 DIEXFQ68CQ4 756 aaKnown RBP27.81■■■□□ 2.04
KLC1-221ENST00000556986 VAMP4O75379 141 aa27.8■■■□□ 2.04
KLC1-221ENST00000556986 GOLGA2Q08379 1002 aa27.8■■■□□ 2.04
KLC1-221ENST00000556986 PRPF40BQ6NWY9 871 aaKnown RBP27.8■■■□□ 2.04
KLC1-221ENST00000556986 LAMB2P55268 1798 aa27.8■■■□□ 2.04
KLC1-221ENST00000556986 EXOSC9Q06265 439 aaKnown RBP27.79■■■□□ 2.04
KLC1-221ENST00000556986 TRIM28Q13263 835 aaKnown RBP27.79■■■□□ 2.04
KLC1-221ENST00000556986 C7orf43Q8WVR3 580 aa27.79■■■□□ 2.04
KLC1-221ENST00000556986 C21orf2O43822 256 aa27.78■■■□□ 2.04
KLC1-221ENST00000556986 MYH16Q9H6N6 1097 aa27.78■■■□□ 2.04
KLC1-221ENST00000556986 HOXA10P31260 410 aaPredicted RBP27.77■■■□□ 2.04
KLC1-221ENST00000556986 RIC3Q7Z5B4 369 aa27.77■■■□□ 2.04
KLC1-221ENST00000556986 NFKBIEO00221 500 aa27.76■■■□□ 2.03
KLC1-221ENST00000556986 PRELPP51888 382 aa27.76■■■□□ 2.03
KLC1-221ENST00000556986 RASSF7Q02833 373 aa27.76■■■□□ 2.03
KLC1-221ENST00000556986 C9orf131Q5VYM1 1079 aa27.76■■■□□ 2.03
KLC1-221ENST00000556986 C3orf67Q6ZVT6 689 aa27.76■■■□□ 2.03
KLC1-221ENST00000556986 STK31Q9BXU1 1019 aa27.76■■■□□ 2.03
KLC1-221ENST00000556986 DDX60Q8IY21 1712 aaKnown RBP27.75■■■□□ 2.03
KLC1-221ENST00000556986 DICER1Q9UPY3 1922 aaKnown RBP27.75■■■□□ 2.03
KLC1-221ENST00000556986 ATP5J2-PTCD1G3V325 749 aa27.75■■■□□ 2.03
KLC1-221ENST00000556986 TCERG1O14776 1098 aaKnown RBP27.75■■■□□ 2.03
KLC1-221ENST00000556986 ALDH1B1P30837 517 aa27.75■■■□□ 2.03
KLC1-221ENST00000556986 SYNE4Q8N205 404 aa27.75■■■□□ 2.03
KLC1-221ENST00000556986 TRMT112Q9UI30 125 aaKnown RBP27.75■■■□□ 2.03
KLC1-221ENST00000556986 SLC4A2P04920 1241 aa27.74■■■□□ 2.03
KLC1-221ENST00000556986 MIER1Q8N108 512 aa27.74■■■□□ 2.03
KLC1-221ENST00000556986 NLRP3Q96P20 1036 aa27.74■■■□□ 2.03
KLC1-221ENST00000556986 ZNF219Q9P2Y4 722 aaPredicted RBP27.74■■■□□ 2.03
KLC1-221ENST00000556986 SH3TC1Q8TE82 1336 aa27.73■■■□□ 2.03
KLC1-221ENST00000556986 DDX58O95786 925 aaKnown RBP27.73■■■□□ 2.03
KLC1-221ENST00000556986 G2E3Q7L622 706 aa27.73■■■□□ 2.03
KLC1-221ENST00000556986 SOGA3Q5TF21 947 aa27.72■■■□□ 2.03
KLC1-221ENST00000556986 METTL22Q9BUU2 404 aaPredicted RBP27.72■■■□□ 2.03
KLC1-221ENST00000556986 LTBP3Q9NS15 1303 aa27.71■■■□□ 2.03
KLC1-221ENST00000556986 KSR2Q6VAB6 950 aa27.71■■■□□ 2.03
KLC1-221ENST00000556986 CRAMP1Q96RY5 1269 aa27.71■■■□□ 2.03
KLC1-221ENST00000556986 RNF181Q9P0P0 153 aa27.71■■■□□ 2.03
KLC1-221ENST00000556986 HCLS1P14317 486 aaPredicted RBP27.7■■■□□ 2.02
KLC1-221ENST00000556986 LMNB1P20700 586 aa27.7■■■□□ 2.02
KLC1-221ENST00000556986 RPGRQ92834 1020 aaKnown RBP27.7■■■□□ 2.02
KLC1-221ENST00000556986 MYD88Q99836 296 aa27.7■■■□□ 2.02
KLC1-221ENST00000556986 PI4KAP2A4QPH2 592 aa27.69■■■□□ 2.02
KLC1-221ENST00000556986 PI4KAP1Q8N8J0 262 aa27.69■■■□□ 2.02
KLC1-221ENST00000556986 ZNF428Q96B54 188 aa27.69■■■□□ 2.02
KLC1-221ENST00000556986 RBM17Q96I25 401 aaKnown RBP27.69■■■□□ 2.02
KLC1-221ENST00000556986 MAP3K2Q9Y2U5 619 aa27.69■■■□□ 2.02
KLC1-221ENST00000556986 SNED1Q8TER0 1413 aa27.68■■■□□ 2.02
KLC1-221ENST00000556986 CCDC191Q8NCU4 936 aa27.68■■■□□ 2.02
KLC1-221ENST00000556986 FAM89AQ96GI7 184 aa27.68■■■□□ 2.02
KLC1-221ENST00000556986 E9PSI1 815 aa27.67■■■□□ 2.02
KLC1-221ENST00000556986 SLFN5Q08AF3 891 aa27.67■■■□□ 2.02
KLC1-221ENST00000556986 FLIIQ13045 1269 aa27.67■■■□□ 2.02
KLC1-221ENST00000556986 CCDC93Q567U6 631 aa27.67■■■□□ 2.02
KLC1-221ENST00000556986 TAF1P21675 1872 aa27.67■■■□□ 2.02
KLC1-221ENST00000556986 OLFM4Q6UX06 510 aa27.66■■■□□ 2.02
KLC1-221ENST00000556986 TIAM2Q8IVF5 1701 aa27.66■■■□□ 2.02
KLC1-221ENST00000556986 IGKV5-2P06315 115 aa27.65■■■□□ 2.02
KLC1-221ENST00000556986 ZBTB38Q8NAP3 1195 aaPredicted RBP27.65■■■□□ 2.02
KLC1-221ENST00000556986 TAOK3Q9H2K8 898 aa27.65■■■□□ 2.02
KLC1-221ENST00000556986 GPBP1L1Q9HC44 474 aaPredicted RBP27.65■■■□□ 2.02
KLC1-221ENST00000556986 ZC3H4Q9UPT8 1303 aaKnown RBP27.65■■■□□ 2.02
KLC1-221ENST00000556986 TRMT2AQ8IZ69 625 aaKnown RBP27.64■■■□□ 2.02
KLC1-221ENST00000556986 SF3B3Q15393 1217 aaKnown RBP27.63■■■□□ 2.01
KLC1-221ENST00000556986 ZNF526Q8TF50 670 aaPredicted RBP27.63■■■□□ 2.01
KLC1-221ENST00000556986 CWC25Q9NXE8 425 aaPredicted RBP27.63■■■□□ 2.01
KLC1-221ENST00000556986 PCCAP05165 728 aaPredicted RBP27.62■■■□□ 2.01
KLC1-221ENST00000556986 CC2D2BQ6DHV5 1058 aa27.62■■■□□ 2.01
KLC1-221ENST00000556986 RTKN2Q8IZC4 609 aa27.62■■■□□ 2.01
KLC1-221ENST00000556986 CDCA7LQ96GN5 454 aa27.62■■■□□ 2.01
KLC1-221ENST00000556986 ABCC4O15439 1325 aa27.62■■■□□ 2.01
KLC1-221ENST00000556986 IRS4O14654 1257 aaPredicted RBP27.61■■■□□ 2.01
KLC1-221ENST00000556986 FKBP4Q02790 459 aaKnown RBP eCLIP27.61■■■□□ 2.011e-6■■□□□ 11.7
KLC1-221ENST00000556986 RTL5Q5HYW3 569 aaPredicted RBP27.61■■■□□ 2.01
KLC1-221ENST00000556986 FKBP5Q13451 457 aaPredicted RBP27.6■■■□□ 2.01
KLC1-221ENST00000556986 PPEF1O14829 653 aaPredicted RBP27.59■■■□□ 2.01
KLC1-221ENST00000556986 NEXNQ0ZGT2 675 aa27.59■■■□□ 2.01
KLC1-221ENST00000556986 SLC51AQ86UW1 340 aa27.59■■■□□ 2.01
KLC1-221ENST00000556986 NEURL1BA8MQ27 555 aa27.58■■■□□ 2.01
KLC1-221ENST00000556986 BBOX1O75936 387 aa27.58■■■□□ 2.01
KLC1-221ENST00000556986 GRIPAP1Q4V328 841 aa27.58■■■□□ 2.01
KLC1-221ENST00000556986 DDX46Q7L014 1031 aaKnown RBP27.58■■■□□ 2.01
KLC1-221ENST00000556986 DNAAF4Q8WXU2 420 aa27.58■■■□□ 2.01
KLC1-221ENST00000556986 PSMD1Q99460 953 aa27.58■■■□□ 2.01
KLC1-221ENST00000556986 MYH3P11055 1940 aa27.57■■■□□ 2
KLC1-221ENST00000556986 KIF3CO14782 793 aa27.57■■■□□ 2
KLC1-221ENST00000556986 GRAPQ13588 217 aa27.57■■■□□ 2
KLC1-221ENST00000556986 CWF19L2Q2TBE0 894 aaKnown RBP27.57■■■□□ 2
KLC1-221ENST00000556986 GRAPLQ8TC17 118 aaPredicted RBP27.57■■■□□ 2
KLC1-221ENST00000556986 ATP6V0A2Q9Y487 856 aa27.57■■■□□ 2
KLC1-221ENST00000556986 CDHR2Q9BYE9 1310 aa27.57■■■□□ 2
KLC1-221ENST00000556986 COL4A1P02462 1669 aa27.56■■■□□ 2
KLC1-221ENST00000556986 HSP90B1P14625 803 aaKnown RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms