RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 MYD88Q99836 296 aa20.82■□□□□ 0.92
PCNX4-213ENST00000556907 SYT17Q9BSW7 474 aa20.82■□□□□ 0.92
PCNX4-213ENST00000556907 BRIP1Q9BX63 1249 aa20.82■□□□□ 0.92
PCNX4-213ENST00000556907 HSP90B1P14625 803 aaKnown RBP20.81■□□□□ 0.92
PCNX4-213ENST00000556907 LINS1Q8NG48 757 aa20.81■□□□□ 0.92
PCNX4-213ENST00000556907 NTSR2O95665 410 aa20.8■□□□□ 0.92
PCNX4-213ENST00000556907 PDE6BP35913 854 aa20.8■□□□□ 0.92
PCNX4-213ENST00000556907 API5Q9BZZ5 524 aaKnown RBP20.8■□□□□ 0.92
PCNX4-213ENST00000556907 CWC25Q9NXE8 425 aaPredicted RBP20.8■□□□□ 0.92
PCNX4-213ENST00000556907 PXDNLA1KZ92 1463 aa20.8■□□□□ 0.92
PCNX4-213ENST00000556907 ATP5J2-PTCD1G3V325 749 aa20.79■□□□□ 0.92
PCNX4-213ENST00000556907 KLHL34Q8N239 644 aa20.79■□□□□ 0.92
PCNX4-213ENST00000556907 TRMT112Q9UI30 125 aaKnown RBP20.79■□□□□ 0.92
PCNX4-213ENST00000556907 NOB1Q9ULX3 412 aaKnown RBP20.79■□□□□ 0.92
PCNX4-213ENST00000556907 SH3TC1Q8TE82 1336 aa20.78■□□□□ 0.92
PCNX4-213ENST00000556907 RIC1Q4ADV7 1423 aa20.78■□□□□ 0.92
PCNX4-213ENST00000556907 SRCAPQ6ZRS2 3230 aa20.78■□□□□ 0.92
PCNX4-213ENST00000556907 PLIN1O60240 522 aa20.78■□□□□ 0.92
PCNX4-213ENST00000556907 SLC10A5Q5PT55 438 aa20.78■□□□□ 0.92
PCNX4-213ENST00000556907 FAM177BA6PVY3 158 aa20.77■□□□□ 0.92
PCNX4-213ENST00000556907 NEURL1BA8MQ27 555 aa20.77■□□□□ 0.92
PCNX4-213ENST00000556907 ALDH1L1O75891 902 aa20.77■□□□□ 0.92
PCNX4-213ENST00000556907 IGKV5-2P06315 115 aa20.77■□□□□ 0.92
PCNX4-213ENST00000556907 PDE3AQ14432 1141 aa20.77■□□□□ 0.92
PCNX4-213ENST00000556907 ZKSCAN2Q63HK3 967 aa20.77■□□□□ 0.92
PCNX4-213ENST00000556907 ZBTB38Q8NAP3 1195 aaPredicted RBP20.77■□□□□ 0.92
PCNX4-213ENST00000556907 GTF3C3Q9Y5Q9 886 aa20.77■□□□□ 0.92
PCNX4-213ENST00000556907 BEND3Q5T5X7 828 aa20.76■□□□□ 0.91
PCNX4-213ENST00000556907 ERICH6BQ5W0A0 696 aa20.76■□□□□ 0.91
PCNX4-213ENST00000556907 KLRG2A4D1S0 409 aaPredicted RBP20.75■□□□□ 0.91
PCNX4-213ENST00000556907 F6X3S4 739 aa20.75■□□□□ 0.91
PCNX4-213ENST00000556907 PCCAP05165 728 aaPredicted RBP20.75■□□□□ 0.91
PCNX4-213ENST00000556907 FRAT1Q92837 279 aaPredicted RBP20.75■□□□□ 0.91
PCNX4-213ENST00000556907 SRCIN1Q9C0H9 1055 aa20.75■□□□□ 0.91
PCNX4-213ENST00000556907 H0YIN7 160 aa20.74■□□□□ 0.91
PCNX4-213ENST00000556907 MS4A1P11836 297 aa20.74■□□□□ 0.91
PCNX4-213ENST00000556907 IRX6P78412 446 aaPredicted RBP20.74■□□□□ 0.91
PCNX4-213ENST00000556907 ERFEQ4G0M1 354 aa20.74■□□□□ 0.91
PCNX4-213ENST00000556907 SLC4A10Q6U841 1118 aa20.74■□□□□ 0.91
PCNX4-213ENST00000556907 ATF7IPQ6VMQ6 1270 aa20.74■□□□□ 0.91
PCNX4-213ENST00000556907 NUTM1Q86Y26 1132 aa20.74■□□□□ 0.91
PCNX4-213ENST00000556907 NLRP3Q96P20 1036 aa20.74■□□□□ 0.91
PCNX4-213ENST00000556907 TRIM27P14373 513 aa20.73■□□□□ 0.91
PCNX4-213ENST00000556907 CCT4P50991 539 aaKnown RBP20.73■□□□□ 0.91
PCNX4-213ENST00000556907 GCKRQ14397 625 aa20.73■□□□□ 0.91
PCNX4-213ENST00000556907 CWF19L2Q2TBE0 894 aaKnown RBP20.73■□□□□ 0.91
PCNX4-213ENST00000556907 ABCC4O15439 1325 aa20.73■□□□□ 0.91
PCNX4-213ENST00000556907 C20orf194Q5TEA3 1177 aa20.72■□□□□ 0.91
PCNX4-213ENST00000556907 CDHR2Q9BYE9 1310 aa20.72■□□□□ 0.91
PCNX4-213ENST00000556907 ANKRD31Q8N7Z5 1873 aa20.71■□□□□ 0.91
PCNX4-213ENST00000556907 H7C1W4 665 aa20.71■□□□□ 0.91
PCNX4-213ENST00000556907 C2CD5Q86YS7 1000 aa20.71■□□□□ 0.91
PCNX4-213ENST00000556907 NLGN2Q8NFZ4 835 aa20.71■□□□□ 0.91
PCNX4-213ENST00000556907 FAM89AQ96GI7 184 aa20.71■□□□□ 0.91
PCNX4-213ENST00000556907 IRS4O14654 1257 aaPredicted RBP20.7■□□□□ 0.9
PCNX4-213ENST00000556907 SRGNP10124 158 aa20.7■□□□□ 0.9
PCNX4-213ENST00000556907 DPEP1P16444 411 aa20.7■□□□□ 0.9
PCNX4-213ENST00000556907 CRY2Q49AN0 593 aa20.7■□□□□ 0.9
PCNX4-213ENST00000556907 STYK1Q6J9G0 422 aa20.7■□□□□ 0.9
PCNX4-213ENST00000556907 DZIP1LQ8IYY4 767 aaKnown RBP20.7■□□□□ 0.9
PCNX4-213ENST00000556907 CCDC24Q8N4L8 307 aa20.7■□□□□ 0.9
PCNX4-213ENST00000556907 MASTLQ96GX5 879 aa20.7■□□□□ 0.9
PCNX4-213ENST00000556907 PIM2Q9P1W9 311 aa20.7■□□□□ 0.9
PCNX4-213ENST00000556907 ABCC12Q96J65 1359 aa20.7■□□□□ 0.9
PCNX4-213ENST00000556907 A0A0G2JLW4 131 aa20.69■□□□□ 0.9
PCNX4-213ENST00000556907 DCAF8L1A6NGE4 600 aa20.69■□□□□ 0.9
PCNX4-213ENST00000556907 NPR1P16066 1061 aa20.69■□□□□ 0.9
PCNX4-213ENST00000556907 TNNQ9UQP3 1299 aa20.69■□□□□ 0.9
PCNX4-213ENST00000556907 KIAA1551Q9HCM1 1747 aa20.69■□□□□ 0.9
PCNX4-213ENST00000556907 PDE8AO60658 829 aa20.68■□□□□ 0.9
PCNX4-213ENST00000556907 KCNA3P22001 575 aa20.68■□□□□ 0.9
PCNX4-213ENST00000556907 INTS3Q68E01 1043 aaKnown RBP20.68■□□□□ 0.9
PCNX4-213ENST00000556907 FTSJ3Q8IY81 847 aaKnown RBP20.68■□□□□ 0.9
PCNX4-213ENST00000556907 CNKSR1Q969H4 720 aa20.68■□□□□ 0.9
PCNX4-213ENST00000556907 CRBNQ96SW2 442 aa20.68■□□□□ 0.9
PCNX4-213ENST00000556907 C9orf78Q9NZ63 289 aaPredicted RBP20.68■□□□□ 0.9
PCNX4-213ENST00000556907 HDAC5Q9UQL6 1122 aa20.68■□□□□ 0.9
PCNX4-213ENST00000556907 DLEC1Q9Y238 1755 aa20.67■□□□□ 0.9
PCNX4-213ENST00000556907 GRM8O00222 908 aa20.67■□□□□ 0.9
PCNX4-213ENST00000556907 RLBP1P12271 317 aa20.67■□□□□ 0.9
PCNX4-213ENST00000556907 HCLS1P14317 486 aaPredicted RBP20.67■□□□□ 0.9
PCNX4-213ENST00000556907 CHRNA5P30532 468 aa20.67■□□□□ 0.9
PCNX4-213ENST00000556907 ALDH1B1P30837 517 aa20.67■□□□□ 0.9
PCNX4-213ENST00000556907 HOXA10P31260 410 aaPredicted RBP20.67■□□□□ 0.9
PCNX4-213ENST00000556907 SF3B3Q15393 1217 aaKnown RBP20.67■□□□□ 0.9
PCNX4-213ENST00000556907 PANK1Q8TE04 598 aa20.67■□□□□ 0.9
PCNX4-213ENST00000556907 PLA2G12BQ9BX93 195 aa20.67■□□□□ 0.9
PCNX4-213ENST00000556907 UBE3BQ7Z3V4 1068 aa20.66■□□□□ 0.9
PCNX4-213ENST00000556907 TTLL6Q8N841 843 aa20.66■□□□□ 0.9
PCNX4-213ENST00000556907 RPGRQ92834 1020 aaKnown RBP20.66■□□□□ 0.9
PCNX4-213ENST00000556907 RBM17Q96I25 401 aaKnown RBP20.66■□□□□ 0.9
PCNX4-213ENST00000556907 UTYO14607 1347 aa20.66■□□□□ 0.9
PCNX4-213ENST00000556907 LAMB2P55268 1798 aa20.66■□□□□ 0.9
PCNX4-213ENST00000556907 CASP7P55210 303 aa20.65■□□□□ 0.9
PCNX4-213ENST00000556907 DALRD3Q5D0E6 543 aaKnown RBP20.65■□□□□ 0.9
PCNX4-213ENST00000556907 RTL5Q5HYW3 569 aaPredicted RBP20.65■□□□□ 0.9
PCNX4-213ENST00000556907 SYNE4Q8N205 404 aa20.65■□□□□ 0.9
PCNX4-213ENST00000556907 ZNF622Q969S3 477 aaKnown RBP eCLIP20.65■□□□□ 0.9
PCNX4-213ENST00000556907 BRCA1P38398 1863 aaKnown RBP20.64■□□□□ 0.9
PCNX4-213ENST00000556907 MVPQ14764 893 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms