RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 UTP14AQ9BVJ6 771 aaKnown RBP25.76■■□□□ 1.71
RCCD1-205ENST00000556333 SMC4Q9NTJ3 1288 aa25.76■■□□□ 1.71
RCCD1-205ENST00000556333 COL11A2P13942 1736 aaPredicted RBP25.75■■□□□ 1.71
RCCD1-205ENST00000556333 DPEP1P16444 411 aa25.75■■□□□ 1.71
RCCD1-205ENST00000556333 PDE6BP35913 854 aa25.75■■□□□ 1.71
RCCD1-205ENST00000556333 NEXNQ0ZGT2 675 aa25.75■■□□□ 1.71
RCCD1-205ENST00000556333 MRPL50Q8N5N7 158 aaKnown RBP25.75■■□□□ 1.71
RCCD1-205ENST00000556333 IBTKQ9P2D0 1353 aaPredicted RBP25.74■■□□□ 1.71
RCCD1-205ENST00000556333 NTSR2O95665 410 aa25.74■■□□□ 1.71
RCCD1-205ENST00000556333 ERFEQ4G0M1 354 aa25.74■■□□□ 1.71
RCCD1-205ENST00000556333 ISCA1Q9BUE6 129 aa25.74■■□□□ 1.71
RCCD1-205ENST00000556333 BRIP1Q9BX63 1249 aa25.74■■□□□ 1.71
RCCD1-205ENST00000556333 TRMT112Q9UI30 125 aaKnown RBP25.74■■□□□ 1.71
RCCD1-205ENST00000556333 CHRNA5P30532 468 aa25.73■■□□□ 1.71
RCCD1-205ENST00000556333 C2CD5Q86YS7 1000 aa25.73■■□□□ 1.71
RCCD1-205ENST00000556333 TNRC6CQ9HCJ0 1690 aaKnown RBP25.73■■□□□ 1.71
RCCD1-205ENST00000556333 CHD4Q14839 1912 aa25.73■■□□□ 1.71
RCCD1-205ENST00000556333 LAMB2P55268 1798 aa25.72■■□□□ 1.71
RCCD1-205ENST00000556333 H0YIN7 160 aa25.72■■□□□ 1.71
RCCD1-205ENST00000556333 DNAAF4Q8WXU2 420 aa25.72■■□□□ 1.71
RCCD1-205ENST00000556333 DDX60Q8IY21 1712 aaKnown RBP25.71■■□□□ 1.71
RCCD1-205ENST00000556333 ABCC12Q96J65 1359 aa25.7■■□□□ 1.71
RCCD1-205ENST00000556333 F6X3S4 739 aa25.7■■□□□ 1.7
RCCD1-205ENST00000556333 RARSP54136 660 aaKnown RBP25.69■■□□□ 1.7
RCCD1-205ENST00000556333 RTL5Q5HYW3 569 aaPredicted RBP25.69■■□□□ 1.7
RCCD1-205ENST00000556333 IFFO2Q5TF58 517 aa25.69■■□□□ 1.7
RCCD1-205ENST00000556333 CCDC191Q8NCU4 936 aa25.69■■□□□ 1.7
RCCD1-205ENST00000556333 CWC25Q9NXE8 425 aaPredicted RBP25.69■■□□□ 1.7
RCCD1-205ENST00000556333 RNF123Q5XPI4 1314 aa25.68■■□□□ 1.7
RCCD1-205ENST00000556333 SH3TC1Q8TE82 1336 aa25.68■■□□□ 1.7
RCCD1-205ENST00000556333 ARFGEF1Q9Y6D6 1849 aa25.68■■□□□ 1.7
RCCD1-205ENST00000556333 TRIM28Q13263 835 aaKnown RBP25.68■■□□□ 1.7
RCCD1-205ENST00000556333 CWF19L2Q2TBE0 894 aaKnown RBP25.68■■□□□ 1.7
RCCD1-205ENST00000556333 SLC4A10Q6U841 1118 aa25.68■■□□□ 1.7
RCCD1-205ENST00000556333 ZNF622Q969S3 477 aaKnown RBP eCLIP25.68■■□□□ 1.79e-8■□□□□ 11
RCCD1-205ENST00000556333 PIM2Q9P1W9 311 aa25.68■■□□□ 1.7
RCCD1-205ENST00000556333 PDZRN3Q9UPQ7 1066 aa25.68■■□□□ 1.7
RCCD1-205ENST00000556333 PTPRCP08575 1304 aa25.67■■□□□ 1.7
RCCD1-205ENST00000556333 FAM89AQ96GI7 184 aa25.67■■□□□ 1.7
RCCD1-205ENST00000556333 BCS1LQ9Y276 419 aa25.67■■□□□ 1.7
RCCD1-205ENST00000556333 IGKV5-2P06315 115 aa25.66■■□□□ 1.7
RCCD1-205ENST00000556333 KCNA3P22001 575 aa25.66■■□□□ 1.7
RCCD1-205ENST00000556333 SYNE4Q8N205 404 aa25.66■■□□□ 1.7
RCCD1-205ENST00000556333 MYH3P11055 1940 aa25.66■■□□□ 1.7
RCCD1-205ENST00000556333 NLRP3Q96P20 1036 aa25.65■■□□□ 1.7
RCCD1-205ENST00000556333 NEURL1BA8MQ27 555 aa25.64■■□□□ 1.7
RCCD1-205ENST00000556333 HCLS1P14317 486 aaPredicted RBP25.64■■□□□ 1.7
RCCD1-205ENST00000556333 LINS1Q8NG48 757 aa25.64■■□□□ 1.7
RCCD1-205ENST00000556333 NOB1Q9ULX3 412 aaKnown RBP25.64■■□□□ 1.7
RCCD1-205ENST00000556333 RIC1Q4ADV7 1423 aa25.63■■□□□ 1.69
RCCD1-205ENST00000556333 SRGNP10124 158 aa25.63■■□□□ 1.69
RCCD1-205ENST00000556333 ZBTB38Q8NAP3 1195 aaPredicted RBP25.63■■□□□ 1.69
RCCD1-205ENST00000556333 JARID2Q92833 1246 aaPredicted RBP25.63■■□□□ 1.69
RCCD1-205ENST00000556333 MASTLQ96GX5 879 aa25.63■■□□□ 1.69
RCCD1-205ENST00000556333 KIF16BQ96L93 1317 aa25.63■■□□□ 1.69
RCCD1-205ENST00000556333 BCAR3O75815 825 aa25.62■■□□□ 1.69
RCCD1-205ENST00000556333 YBX3P16989 372 aaKnown RBP eCLIP25.62■■□□□ 1.69
RCCD1-205ENST00000556333 DALRD3Q5D0E6 543 aaKnown RBP25.62■■□□□ 1.69
RCCD1-205ENST00000556333 SLC10A5Q5PT55 438 aa25.62■■□□□ 1.69
RCCD1-205ENST00000556333 RPGRQ92834 1020 aaKnown RBP25.62■■□□□ 1.69
RCCD1-205ENST00000556333 SLX4Q8IY92 1834 aa25.61■■□□□ 1.69
RCCD1-205ENST00000556333 IRS4O14654 1257 aaPredicted RBP25.61■■□□□ 1.69
RCCD1-205ENST00000556333 PCCAP05165 728 aaPredicted RBP25.61■■□□□ 1.69
RCCD1-205ENST00000556333 NPR1P16066 1061 aa25.61■■□□□ 1.69
RCCD1-205ENST00000556333 TTLL6Q8N841 843 aa25.61■■□□□ 1.69
RCCD1-205ENST00000556333 FRAT1Q92837 279 aaPredicted RBP25.61■■□□□ 1.69
RCCD1-205ENST00000556333 TAF1P21675 1872 aa25.6■■□□□ 1.69
RCCD1-205ENST00000556333 CEP350Q5VT06 3117 aa25.6■■□□□ 1.69
RCCD1-205ENST00000556333 BRPF1P55201 1214 aaPredicted RBP25.6■■□□□ 1.69
RCCD1-205ENST00000556333 BEND3Q5T5X7 828 aa25.6■■□□□ 1.69
RCCD1-205ENST00000556333 STYK1Q6J9G0 422 aa25.6■■□□□ 1.69
RCCD1-205ENST00000556333 SRCIN1Q9C0H9 1055 aa25.6■■□□□ 1.69
RCCD1-205ENST00000556333 KLRG2A4D1S0 409 aaPredicted RBP25.59■■□□□ 1.69
RCCD1-205ENST00000556333 GCKRQ14397 625 aa25.59■■□□□ 1.69
RCCD1-205ENST00000556333 CNKSR1Q969H4 720 aa25.59■■□□□ 1.69
RCCD1-205ENST00000556333 GOLGB1Q14789 3259 aaKnown RBP25.58■■□□□ 1.69
RCCD1-205ENST00000556333 HSP90B1P14625 803 aaKnown RBP25.58■■□□□ 1.69
RCCD1-205ENST00000556333 C3orf67Q6ZVT6 689 aa25.58■■□□□ 1.69
RCCD1-205ENST00000556333 API5Q9BZZ5 524 aaKnown RBP25.58■■□□□ 1.69
RCCD1-205ENST00000556333 GRIN3BO60391 1043 aa25.57■■□□□ 1.68
RCCD1-205ENST00000556333 CRY2Q49AN0 593 aa25.57■■□□□ 1.68
RCCD1-205ENST00000556333 UBE3BQ7Z3V4 1068 aa25.57■■□□□ 1.68
RCCD1-205ENST00000556333 RBM17Q96I25 401 aaKnown RBP25.57■■□□□ 1.68
RCCD1-205ENST00000556333 ZNF219Q9P2Y4 722 aaPredicted RBP25.57■■□□□ 1.68
RCCD1-205ENST00000556333 IPO8O15397 1037 aaKnown RBP25.56■■□□□ 1.68
RCCD1-205ENST00000556333 ALDH1B1P30837 517 aa25.56■■□□□ 1.68
RCCD1-205ENST00000556333 PDE8AO60658 829 aa25.55■■□□□ 1.68
RCCD1-205ENST00000556333 ALDH1L1O75891 902 aa25.55■■□□□ 1.68
RCCD1-205ENST00000556333 C9orf78Q9NZ63 289 aaPredicted RBP25.55■■□□□ 1.68
RCCD1-205ENST00000556333 CDHR2Q9BYE9 1310 aa25.55■■□□□ 1.68
RCCD1-205ENST00000556333 H7C1W4 665 aa25.54■■□□□ 1.68
RCCD1-205ENST00000556333 PRPF40BQ6NWY9 871 aaKnown RBP25.54■■□□□ 1.68
RCCD1-205ENST00000556333 ARHGAP45Q92619 1136 aa25.53■■□□□ 1.68
RCCD1-205ENST00000556333 SPEF2Q9C093 1822 aa25.53■■□□□ 1.68
RCCD1-205ENST00000556333 CCDC88AQ3V6T2 1871 aa25.53■■□□□ 1.68
RCCD1-205ENST00000556333 ARHGAP27Q6ZUM4 889 aa25.52■■□□□ 1.68
RCCD1-205ENST00000556333 DDX46Q7L014 1031 aaKnown RBP25.52■■□□□ 1.68
RCCD1-205ENST00000556333 GRM8O00222 908 aa25.51■■□□□ 1.67
RCCD1-205ENST00000556333 C21orf2O43822 256 aa25.51■■□□□ 1.67
RCCD1-205ENST00000556333 ZKSCAN2Q63HK3 967 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms