RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 NEURL1BA8MQ27 555 aa17.95■□□□□ 0.46
SNX6-206ENST00000556162 NTSR2O95665 410 aa17.95■□□□□ 0.46
SNX6-206ENST00000556162 BEND3Q5T5X7 828 aa17.95■□□□□ 0.46
SNX6-206ENST00000556162 ZKSCAN2Q63HK3 967 aa17.95■□□□□ 0.46
SNX6-206ENST00000556162 NUTM1Q86Y26 1132 aa17.95■□□□□ 0.46
SNX6-206ENST00000556162 CCDC24Q8N4L8 307 aa17.95■□□□□ 0.46
SNX6-206ENST00000556162 FHDC1Q9C0D6 1143 aaPredicted RBP17.95■□□□□ 0.46
SNX6-206ENST00000556162 ATF7IPQ6VMQ6 1270 aa17.94■□□□□ 0.46
SNX6-206ENST00000556162 SRCIN1Q9C0H9 1055 aa17.94■□□□□ 0.46
SNX6-206ENST00000556162 RNF123Q5XPI4 1314 aa17.94■□□□□ 0.46
SNX6-206ENST00000556162 ERFEQ4G0M1 354 aa17.93■□□□□ 0.46
SNX6-206ENST00000556162 BRIP1Q9BX63 1249 aa17.93■□□□□ 0.46
SNX6-206ENST00000556162 SH3TC1Q8TE82 1336 aa17.93■□□□□ 0.46
SNX6-206ENST00000556162 ANKRD36CQ5JPF3 1778 aa17.93■□□□□ 0.46
SNX6-206ENST00000556162 ALDH1L1O75891 902 aa17.92■□□□□ 0.46
SNX6-206ENST00000556162 TRIM27P14373 513 aa17.92■□□□□ 0.46
SNX6-206ENST00000556162 GCKRQ14397 625 aa17.92■□□□□ 0.46
SNX6-206ENST00000556162 ZBTB38Q8NAP3 1195 aaPredicted RBP17.92■□□□□ 0.46
SNX6-206ENST00000556162 FAM89AQ96GI7 184 aa17.92■□□□□ 0.46
SNX6-206ENST00000556162 SYT17Q9BSW7 474 aa17.92■□□□□ 0.46
SNX6-206ENST00000556162 AFDNP55196 1824 aaKnown RBP17.91■□□□□ 0.46
SNX6-206ENST00000556162 C10orf71Q711Q0 1435 aa17.91■□□□□ 0.46
SNX6-206ENST00000556162 PDE6BP35913 854 aa17.91■□□□□ 0.46
SNX6-206ENST00000556162 TGFB2P61812 414 aa17.91■□□□□ 0.46
SNX6-206ENST00000556162 RTL5Q5HYW3 569 aaPredicted RBP17.91■□□□□ 0.46
SNX6-206ENST00000556162 NRXN2Q9P2S2 1712 aa17.91■□□□□ 0.46
SNX6-206ENST00000556162 PCCAP05165 728 aaPredicted RBP17.9■□□□□ 0.46
SNX6-206ENST00000556162 CCT4P50991 539 aaKnown RBP17.9■□□□□ 0.46
SNX6-206ENST00000556162 SLC10A5Q5PT55 438 aa17.9■□□□□ 0.46
SNX6-206ENST00000556162 SYNE4Q8N205 404 aa17.9■□□□□ 0.46
SNX6-206ENST00000556162 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.9■□□□□ 0.46
SNX6-206ENST00000556162 CLUAP1Q96AJ1 413 aa17.9■□□□□ 0.46
SNX6-206ENST00000556162 HSP90B1P14625 803 aaKnown RBP17.89■□□□□ 0.45
SNX6-206ENST00000556162 PDZRN3Q9UPQ7 1066 aa17.89■□□□□ 0.45
SNX6-206ENST00000556162 FTSJ3Q8IY81 847 aaKnown RBP17.88■□□□□ 0.45
SNX6-206ENST00000556162 JARID2Q92833 1246 aaPredicted RBP17.88■□□□□ 0.45
SNX6-206ENST00000556162 NLRP3Q96P20 1036 aa17.88■□□□□ 0.45
SNX6-206ENST00000556162 C9orf78Q9NZ63 289 aaPredicted RBP17.88■□□□□ 0.45
SNX6-206ENST00000556162 PXDNLA1KZ92 1463 aa17.88■□□□□ 0.45
SNX6-206ENST00000556162 H0YIN7 160 aa17.88■□□□□ 0.45
SNX6-206ENST00000556162 H7C1W4 665 aa17.88■□□□□ 0.45
SNX6-206ENST00000556162 IRS4O14654 1257 aaPredicted RBP17.88■□□□□ 0.45
SNX6-206ENST00000556162 MS4A1P11836 297 aa17.88■□□□□ 0.45
SNX6-206ENST00000556162 HCLS1P14317 486 aaPredicted RBP17.88■□□□□ 0.45
SNX6-206ENST00000556162 ABCC4O15439 1325 aa17.88■□□□□ 0.45
SNX6-206ENST00000556162 ABCC12Q96J65 1359 aa17.88■□□□□ 0.45
SNX6-206ENST00000556162 A0A0G2JLW4 131 aa17.87■□□□□ 0.45
SNX6-206ENST00000556162 INTS3Q68E01 1043 aaKnown RBP17.87■□□□□ 0.45
SNX6-206ENST00000556162 UBE3BQ7Z3V4 1068 aa17.87■□□□□ 0.45
SNX6-206ENST00000556162 C2CD5Q86YS7 1000 aa17.87■□□□□ 0.45
SNX6-206ENST00000556162 DZIP1LQ8IYY4 767 aaKnown RBP17.87■□□□□ 0.45
SNX6-206ENST00000556162 NLGN2Q8NFZ4 835 aa17.87■□□□□ 0.45
SNX6-206ENST00000556162 TNNQ9UQP3 1299 aa17.87■□□□□ 0.45
SNX6-206ENST00000556162 GRM8O00222 908 aa17.86■□□□□ 0.45
SNX6-206ENST00000556162 DPEP1P16444 411 aa17.86■□□□□ 0.45
SNX6-206ENST00000556162 CDHR2Q9BYE9 1310 aa17.86■□□□□ 0.45
SNX6-206ENST00000556162 KLRG2A4D1S0 409 aaPredicted RBP17.86■□□□□ 0.45
SNX6-206ENST00000556162 PLIN1O60240 522 aa17.86■□□□□ 0.45
SNX6-206ENST00000556162 CHRNA5P30532 468 aa17.86■□□□□ 0.45
SNX6-206ENST00000556162 RIC1Q4ADV7 1423 aa17.85■□□□□ 0.45
SNX6-206ENST00000556162 PDE8AO60658 829 aa17.84■□□□□ 0.45
SNX6-206ENST00000556162 KIF13BQ9NQT8 1826 aa17.84■□□□□ 0.45
SNX6-206ENST00000556162 SRGNP10124 158 aa17.84■□□□□ 0.45
SNX6-206ENST00000556162 CASP7P55210 303 aa17.84■□□□□ 0.45
SNX6-206ENST00000556162 TMEM57Q8N5G2 664 aa17.84■□□□□ 0.45
SNX6-206ENST00000556162 USP44Q9H0E7 712 aa17.84■□□□□ 0.45
SNX6-206ENST00000556162 GOLGB1Q14789 3259 aaKnown RBP17.83■□□□□ 0.44
SNX6-206ENST00000556162 NBPF7P0C2Y1 421 aaPredicted RBP17.83■□□□□ 0.44
SNX6-206ENST00000556162 CRY2Q49AN0 593 aa17.83■□□□□ 0.44
SNX6-206ENST00000556162 C3orf67Q6ZVT6 689 aa17.83■□□□□ 0.44
SNX6-206ENST00000556162 RPGRQ92834 1020 aaKnown RBP17.83■□□□□ 0.44
SNX6-206ENST00000556162 ZNF622Q969S3 477 aaKnown RBP eCLIP17.83■□□□□ 0.444e-7■■□□□ 11.4
SNX6-206ENST00000556162 MASTLQ96GX5 879 aa17.83■□□□□ 0.44
SNX6-206ENST00000556162 PIM2Q9P1W9 311 aa17.83■□□□□ 0.44
SNX6-206ENST00000556162 NPR1P16066 1061 aa17.82■□□□□ 0.44
SNX6-206ENST00000556162 KCNA3P22001 575 aa17.82■□□□□ 0.44
SNX6-206ENST00000556162 PANK1Q8TE04 598 aa17.82■□□□□ 0.44
SNX6-206ENST00000556162 UTYO14607 1347 aa17.82■□□□□ 0.44
SNX6-206ENST00000556162 RLBP1P12271 317 aa17.82■□□□□ 0.44
SNX6-206ENST00000556162 SF3B3Q15393 1217 aaKnown RBP17.82■□□□□ 0.44
SNX6-206ENST00000556162 STYK1Q6J9G0 422 aa17.82■□□□□ 0.44
SNX6-206ENST00000556162 ANKRD31Q8N7Z5 1873 aa17.81■□□□□ 0.44
SNX6-206ENST00000556162 PDE3AQ14432 1141 aa17.81■□□□□ 0.44
SNX6-206ENST00000556162 ITPRIPQ8IWB1 547 aa17.81■□□□□ 0.44
SNX6-206ENST00000556162 RBM17Q96I25 401 aaKnown RBP17.81■□□□□ 0.44
SNX6-206ENST00000556162 PLA2G12BQ9BX93 195 aa17.81■□□□□ 0.44
SNX6-206ENST00000556162 ALDH1B1P30837 517 aa17.8■□□□□ 0.44
SNX6-206ENST00000556162 RRP1P56182 461 aaKnown RBP17.8■□□□□ 0.44
SNX6-206ENST00000556162 CNKSR1Q969H4 720 aa17.8■□□□□ 0.44
SNX6-206ENST00000556162 HDAC5Q9UQL6 1122 aa17.8■□□□□ 0.44
SNX6-206ENST00000556162 UBTFL1P0CB47 393 aaPredicted RBP17.8■□□□□ 0.44
SNX6-206ENST00000556162 HOXA10P31260 410 aaPredicted RBP17.8■□□□□ 0.44
SNX6-206ENST00000556162 CTSWP56202 376 aa17.8■□□□□ 0.44
SNX6-206ENST00000556162 CCDC152Q4G0S7 254 aa17.8■□□□□ 0.44
SNX6-206ENST00000556162 DDX46Q7L014 1031 aaKnown RBP17.8■□□□□ 0.44
SNX6-206ENST00000556162 TTLL6Q8N841 843 aa17.8■□□□□ 0.44
SNX6-206ENST00000556162 WWC3Q9ULE0 1092 aa17.8■□□□□ 0.44
SNX6-206ENST00000556162 GNAI3P08754 354 aa17.79■□□□□ 0.44
SNX6-206ENST00000556162 DALRD3Q5D0E6 543 aaKnown RBP17.79■□□□□ 0.44
SNX6-206ENST00000556162 TTLL11Q8NHH1 800 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms